FFCP PHASE1:Hg19::chr11:101981127..101981164,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:101981127..101981164,+
|short_description=p2@YAP1
|description=CAGE_peak_2_at_YAP1_5end
|association_with_transcript=-27bp_to_ENST00000282441,ENST00000526...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10413 | |EntrezGene=10413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |HGNC=16262 | ||
|UniProt=E9PRV2, | |TSSclassifier=strong | ||
|UniProt=E9PRV2,E3WEB6,P46937,Q86T74 | |||
|association_with_transcript=-27bp_to_ENST00000282441,ENST00000526343,NM_001130145,NM_001195044,NM_006106_5end | |||
|cluster_id=chr11:101981127..101981164,+ | |||
|coexpression_cluster_id=C3068 | |||
|description=CAGE_peak_2_at_YAP1_5end | |||
|id=chr11:101981127..101981164,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.77e-09!75;CL:0000066!1.74e-08!254;CL:0000055!3.92e-08!180;CL:0000223!7.59e-08!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.74e-09,76;CL:0000066,3.46e-08,253;CL:0000223,8.77e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.73e-23!169;UBERON:0000925!5.73e-23!169;UBERON:0006595!5.73e-23!169;UBERON:0000481!2.69e-21!347;UBERON:0001007!1.46e-20!155;UBERON:0001555!1.46e-20!155;UBERON:0007026!1.46e-20!155;UBERON:0003104!3.49e-17!238;UBERON:0009142!3.49e-17!238;UBERON:0000475!3.19e-16!365;UBERON:0000468!9.48e-16!659;UBERON:0003102!8.16e-15!95;UBERON:0000077!1.98e-14!130;UBERON:0004921!6.22e-14!129;UBERON:0004185!6.22e-14!129;UBERON:0002100!1.67e-13!216;UBERON:0000062!1.97e-13!511;UBERON:0001048!3.10e-12!168;UBERON:0000467!9.75e-12!625;UBERON:0000480!1.52e-11!626;UBERON:0005256!1.67e-10!143;UBERON:0000922!3.32e-09!612;UBERON:0000466!1.15e-08!126;UBERON:0000064!1.96e-08!219;UBERON:0002050!2.46e-08!605;UBERON:0005423!2.46e-08!605;UBERON:0000923!4.76e-08!604;UBERON:0005291!4.76e-08!604;UBERON:0006598!4.76e-08!604;UBERON:0002532!4.76e-08!604;UBERON:0000161!5.75e-08!35;UBERON:0001004!6.28e-08!72;UBERON:0000477!1.28e-07!286;UBERON:0005156!1.36e-07!59;UBERON:0000990!1.36e-07!59;UBERON:0001041!1.47e-07!98;UBERON:0001737!1.52e-07!9;UBERON:0005911!1.54e-07!82;UBERON:0003929!5.81e-07!54;UBERON:0000119!7.73e-07!312;UBERON:0000165!9.89e-07!28;UBERON:0000930!9.89e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.44e-07;9!UBERON:0001557;1.44e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.20e-23,160;UBERON:0000925,1.20e-23,160;UBERON:0006595,1.20e-23,160;UBERON:0001007,7.27e-21,145;UBERON:0001555,7.27e-21,145;UBERON:0007026,7.27e-21,145;UBERON:0003102,1.95e-15,99;UBERON:0004921,5.83e-14,118;UBERON:0001048,2.94e-12,160;UBERON:0002100,6.20e-11,199;UBERON:0003104,1.78e-10,160;UBERON:0009142,1.78e-10,160;UBERON:0005256,1.05e-08,122;UBERON:0001004,1.76e-08,74;UBERON:0011216,2.10e-08,223;UBERON:0000161,3.77e-08,36;UBERON:0004923,5.02e-08,66;UBERON:0005156,1.19e-07,59;UBERON:0000990,1.19e-07,59;UBERON:0005911,1.25e-07,82;UBERON:0001737,1.43e-07,9;UBERON:0000922,1.82e-07,592;UBERON:0001041,1.82e-07,87;UBERON:0003929,5.14e-07,54;UBERON:0000165,6.60e-07,29;UBERON:0000930,6.60e-07,29 | |||
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| ||
|short_description=p2@YAP1 | |||
}} | }} |
Latest revision as of 16:22, 24 September 2015
Short description: | p2@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YAP1_5end |
Coexpression cluster: | C3068_epidermoid_pharyngeal_aorta_amniotic_chorionic_Hep2_mature |
Association with transcript: | -27bp_to_ENST00000282441, ENST00000526343, NM_001130145, NM_001195044, NM_006106_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | E9PRV2E3WEB6P46937Q86T74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.74e-09 | 76 |
epithelial cell | 3.46e-08 | 253 |
endodermal cell | 8.77e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.20e-23 | 160 |
endoderm | 1.20e-23 | 160 |
presumptive endoderm | 1.20e-23 | 160 |
digestive system | 7.27e-21 | 145 |
digestive tract | 7.27e-21 | 145 |
primitive gut | 7.27e-21 | 145 |
surface structure | 1.95e-15 | 99 |
subdivision of digestive tract | 5.83e-14 | 118 |
primordium | 2.94e-12 | 160 |
trunk | 6.20e-11 | 199 |
mesenchyme | 1.78e-10 | 160 |
entire embryonic mesenchyme | 1.78e-10 | 160 |
trunk mesenchyme | 1.05e-08 | 122 |
respiratory system | 1.76e-08 | 74 |
organ system subdivision | 2.10e-08 | 223 |
orifice | 3.77e-08 | 36 |
organ component layer | 5.02e-08 | 66 |
reproductive structure | 1.19e-07 | 59 |
reproductive system | 1.19e-07 | 59 |
endo-epithelium | 1.25e-07 | 82 |
larynx | 1.43e-07 | 9 |
embryo | 1.82e-07 | 592 |
foregut | 1.82e-07 | 87 |
gut epithelium | 5.14e-07 | 54 |
mouth | 6.60e-07 | 29 |
stomodeum | 6.60e-07 | 29 |