FFCP PHASE1:Hg19::chr7:100663354..100663373,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140453 | |EntrezGene=140453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16800 | |HGNC=16800 | ||
|TSSclassifier=strong | |||
|UniProt=Q685J3 | |UniProt=Q685J3 | ||
|association_with_transcript=0bp_to_NM_001040105,uc003uxp.1,uc010lho.1_5end | |association_with_transcript=0bp_to_NM_001040105,uc003uxp.1,uc010lho.1_5end | ||
|cluster_id=chr7:100663354..100663373,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_MUC17_5end | |description=CAGE_peak_1_at_MUC17_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.07e-16;1 | |ontology_enrichment_development_v019=UBERON:0006242;3.07e-16;1 | ||
|ontology_enrichment_disease=DOID:3493!6.01e-22!2 | |ontology_enrichment_disease=DOID:3493!6.01e-22!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;5.08e-09;2 | |ontology_enrichment_disease_v019=DOID:3493;5.08e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,5.08e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.91e-34!35;UBERON:0000160!1.35e-29!27;UBERON:0000059!5.92e-24!11;UBERON:0002363!1.63e-11!1;UBERON:0007647!1.63e-11!1;UBERON:0010115!1.63e-11!1;UBERON:0001052!1.82e-11!4;UBERON:0001155!2.99e-11!9;UBERON:0004907!2.36e-09!5;UBERON:0004921!2.86e-08!129;UBERON:0004185!2.86e-08!129;UBERON:0001007!5.54e-08!155;UBERON:0001555!5.54e-08!155;UBERON:0007026!5.54e-08!155;UBERON:0004119!3.56e-07!169;UBERON:0000925!3.56e-07!169;UBERON:0006595!3.56e-07!169;UBERON:0002108!4.59e-07!14 | |ontology_enrichment_uberon=UBERON:0005409!5.91e-34!35;UBERON:0000160!1.35e-29!27;UBERON:0000059!5.92e-24!11;UBERON:0002363!1.63e-11!1;UBERON:0007647!1.63e-11!1;UBERON:0010115!1.63e-11!1;UBERON:0001052!1.82e-11!4;UBERON:0001155!2.99e-11!9;UBERON:0004907!2.36e-09!5;UBERON:0004921!2.86e-08!129;UBERON:0004185!2.86e-08!129;UBERON:0001007!5.54e-08!155;UBERON:0001555!5.54e-08!155;UBERON:0007026!5.54e-08!155;UBERON:0004119!3.56e-07!169;UBERON:0000925!3.56e-07!169;UBERON:0006595!3.56e-07!169;UBERON:0002108!4.59e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.14e-53;17!UBERON:0005409;7.01e-53;22!UBERON:0004921;1.20e-31;33!UBERON:0002108;1.32e-28;4!UBERON:0000059;1.59e-22;11!UBERON:0001052;4.87e-16;4!UBERON:0004907;4.96e-13;5!UBERON:0001555;8.28e-13;54!UBERON:0001007;6.09e-09;81!UBERON:0000922;6.86e-08;49!UBERON:0001155;7.51e-08;9 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.14e-53;17!UBERON:0005409;7.01e-53;22!UBERON:0004921;1.20e-31;33!UBERON:0002108;1.32e-28;4!UBERON:0000059;1.59e-22;11!UBERON:0001052;4.87e-16;4!UBERON:0004907;4.96e-13;5!UBERON:0001555;8.28e-13;54!UBERON:0001007;6.09e-09;81!UBERON:0000922;6.86e-08;49!UBERON:0001155;7.51e-08;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.10e-53,17;UBERON:0005409,1.01e-46,25;UBERON:0002108,1.32e-28,4;UBERON:0000059,1.59e-22,11;UBERON:0001052,4.87e-16,4;UBERON:0004907,4.96e-13,5;UBERON:0004921,1.23e-09,118;UBERON:0001007,1.54e-09,145;UBERON:0001555,1.54e-09,145;UBERON:0007026,1.54e-09,145;UBERON:0004119,1.49e-08,160;UBERON:0000925,1.49e-08,160;UBERON:0006595,1.49e-08,160;UBERON:0001155,7.51e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67356066463832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5039080865398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,185.230140069992,49.4934417396237,0,0,0,0,0,0,0,0,0,0,37.5071219750858,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80272163313789,15.5236982486614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,43.890452993617,0,0,0,0,0,0,0,0,0,0,344.659790110081,163.045432135952,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3820183294791,0,0,0,0,0,60.8380866592711,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67356066463832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.5039080865398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,185.230140069992,49.4934417396237,0,0,0,0,0,0,0,0,0,0,37.5071219750858,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80272163313789,15.5236982486614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,43.890452993617,0,0,0,0,0,0,0,0,0,0,344.659790110081,163.045432135952,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3820183294791,0,0,0,0,0,60.8380866592711,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@MUC17 | |short_description=p1@MUC17 | ||
}} | }} |
Latest revision as of 15:27, 24 September 2015
Short description: | p1@MUC17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MUC17_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_NM_001040105, uc003uxp.1, uc010lho.1_5end |
EntrezGene: | MUC17 |
HGNC: | 16800 |
UniProt: | Q685J3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.10e-53 | 17 |
gastrointestinal system | 1.01e-46 | 25 |
small intestine | 1.32e-28 | 4 |
large intestine | 1.59e-22 | 11 |
rectum | 4.87e-16 | 4 |
lower digestive tract | 4.96e-13 | 5 |
subdivision of digestive tract | 1.23e-09 | 118 |
digestive system | 1.54e-09 | 145 |
digestive tract | 1.54e-09 | 145 |
primitive gut | 1.54e-09 | 145 |
endoderm-derived structure | 1.49e-08 | 160 |
endoderm | 1.49e-08 | 160 |
presumptive endoderm | 1.49e-08 | 160 |
colon | 7.51e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.08e-09 | 2 |