FFCP PHASE1:Hg19::chr6:127840520..127840528,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387104 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21494 | |||
|TSSclassifier=strong | |||
|UniProt=A5PLQ8,Q5TF21 | |||
|association_with_transcript=-20bp_to_ENST00000556132,NM_001012279,uc003qbd.2_5end | |||
|cluster_id=chr6:127840520..127840528,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_26_at_C6orf174_5end | |||
|id=chr6:127840520..127840528,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!4.58e-09!6;DOID:171!4.37e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.46e-47!57;UBERON:0005068!1.46e-47!57;UBERON:0006241!1.46e-47!57;UBERON:0007135!1.46e-47!57;UBERON:0000073!4.01e-45!94;UBERON:0001016!4.01e-45!94;UBERON:0001017!4.39e-45!82;UBERON:0000955!1.01e-42!69;UBERON:0006238!1.01e-42!69;UBERON:0005743!1.40e-42!86;UBERON:0002616!1.52e-42!59;UBERON:0002780!9.88e-41!41;UBERON:0001890!9.88e-41!41;UBERON:0006240!9.88e-41!41;UBERON:0003080!1.26e-39!42;UBERON:0001893!1.70e-34!34;UBERON:0001869!1.96e-33!32;UBERON:0002346!2.05e-33!90;UBERON:0003075!5.02e-33!86;UBERON:0007284!5.02e-33!86;UBERON:0002791!4.90e-32!33;UBERON:0002619!1.22e-31!22;UBERON:0002020!3.08e-31!34;UBERON:0003528!3.08e-31!34;UBERON:0001950!1.38e-30!20;UBERON:0003056!5.30e-30!61;UBERON:0000956!1.64e-27!25;UBERON:0000203!1.64e-27!25;UBERON:0000924!1.16e-25!173;UBERON:0006601!1.16e-25!173;UBERON:0004121!5.34e-25!169;UBERON:0000033!5.79e-25!123;UBERON:0000153!2.19e-23!129;UBERON:0007811!2.19e-23!129;UBERON:0007023!6.36e-18!115;UBERON:0001871!8.42e-14!7;UBERON:0000200!3.01e-13!6;UBERON:0000025!5.01e-11!194;UBERON:0002771!1.98e-10!3;UBERON:0001872!2.57e-10!5;UBERON:0003076!2.78e-09!15;UBERON:0003057!2.78e-09!15;UBERON:0004733!9.33e-09!12;UBERON:0002028!9.33e-09!12;UBERON:0007277!9.33e-09!12;UBERON:0004732!4.96e-08!13;UBERON:0003296!7.28e-08!4;UBERON:0010133!7.28e-08!4;UBERON:0001905!1.24e-07!2;UBERON:0002757!1.24e-07!2;UBERON:0010134!1.24e-07!2;UBERON:0002784!1.24e-07!2;UBERON:0005408!1.24e-07!2;UBERON:0001899!1.24e-07!2;UBERON:0001894!1.49e-07!7;UBERON:0006222!1.49e-07!7;UBERON:0004111!2.60e-07!241;UBERON:0000483!3.99e-07!309;UBERON:0000119!5.70e-07!312;UBERON:0002021!8.55e-07!5;UBERON:0000064!9.95e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.66e-19;49!UBERON:0001950;9.85e-18;20!UBERON:0002619;2.85e-16;22!UBERON:0000956;1.70e-14;25!UBERON:0000203;1.70e-14;25!UBERON:0002114;1.71e-14;2!UBERON:0002791;5.16e-11;32!UBERON:0001869;9.33e-11;32!UBERON:0003528;2.25e-10;34!UBERON:0002020;2.25e-10;34!UBERON:0002021;2.63e-09;5!UBERON:0002108;3.10e-09;4!UBERON:0001872;3.10e-09;5!UBERON:0001893;7.94e-09;34!UBERON:0002780;1.05e-08;41!UBERON:0001890;1.05e-08;41!UBERON:0000955;1.06e-08;68!UBERON:0001016;1.92e-07;83!UBERON:0001871;6.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.04e-17,20;UBERON:0002619,3.01e-16,22;UBERON:0002114,1.60e-14,2;UBERON:0000956,1.78e-14,25;UBERON:0000203,1.78e-14,25;UBERON:0002791,1.38e-11,32;UBERON:0001869,1.38e-11,32;UBERON:0003528,5.68e-11,34;UBERON:0002020,5.68e-11,34;UBERON:0001893,5.68e-11,34;UBERON:0000955,9.88e-10,68;UBERON:0006238,9.88e-10,68;UBERON:0002021,2.74e-09,5;UBERON:0002780,2.82e-09,41;UBERON:0001890,2.82e-09,41;UBERON:0003080,2.82e-09,41;UBERON:0006240,2.82e-09,41;UBERON:0002108,2.97e-09,4;UBERON:0001872,3.22e-09,5;UBERON:0001017,2.64e-08,81;UBERON:0001016,1.50e-07,89;UBERON:0000073,2.22e-07,53;UBERON:0002616,2.22e-07,53;UBERON:0001049,4.98e-07,56;UBERON:0005068,4.98e-07,56;UBERON:0006241,4.98e-07,56;UBERON:0007135,4.98e-07,56;UBERON:0001871,6.39e-07,6 | |||
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|short_description=p26@C6orf174 | |||
}} |
Latest revision as of 15:14, 24 September 2015
Short description: | p26@C6orf174 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_C6orf174_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -20bp_to_ENST00000556132, NM_001012279, uc003qbd.2_5end |
EntrezGene: | C6orf174 |
HGNC: | 21494 |
UniProt: | A5PLQ8Q5TF21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 1.04e-17 | 20 |
regional part of cerebral cortex | 3.01e-16 | 22 |
duodenum | 1.60e-14 | 2 |
cerebral cortex | 1.78e-14 | 25 |
pallium | 1.78e-14 | 25 |
regional part of telencephalon | 1.38e-11 | 32 |
cerebral hemisphere | 1.38e-11 | 32 |
brain grey matter | 5.68e-11 | 34 |
gray matter | 5.68e-11 | 34 |
telencephalon | 5.68e-11 | 34 |
brain | 9.88e-10 | 68 |
future brain | 9.88e-10 | 68 |
occipital lobe | 2.74e-09 | 5 |
regional part of forebrain | 2.82e-09 | 41 |
forebrain | 2.82e-09 | 41 |
anterior neural tube | 2.82e-09 | 41 |
future forebrain | 2.82e-09 | 41 |
small intestine | 2.97e-09 | 4 |
parietal lobe | 3.22e-09 | 5 |
central nervous system | 2.64e-08 | 81 |
nervous system | 1.50e-07 | 89 |
regional part of nervous system | 2.22e-07 | 53 |
regional part of brain | 2.22e-07 | 53 |
neural tube | 4.98e-07 | 56 |
neural rod | 4.98e-07 | 56 |
future spinal cord | 4.98e-07 | 56 |
neural keel | 4.98e-07 | 56 |
temporal lobe | 6.39e-07 | 6 |