FFCP PHASE1:Hg19::chr11:7728016..7728029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=341277 | |EntrezGene=341277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29970 | |HGNC=29970 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000534193_5end | |association_with_transcript=-48bp_to_ENST00000534193_5end | ||
|cluster_id=chr11:7728016..7728029,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_2_at_OVCH2_5end | |description=CAGE_peak_2_at_OVCH2_5end | ||
|id=chr11:7728016..7728029,- | |id=chr11:7728016..7728029,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.61e-34;2!UBERON:0003918;6.34e-08;10!UBERON:0007687;6.34e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!2.20e-29!11;UBERON:0006947!8.12e-28!3;UBERON:0004054!8.12e-28!3;UBERON:0003101!1.05e-22!22;UBERON:0000079!1.05e-22!22;UBERON:0001301!1.53e-21!1;UBERON:0001000!1.88e-21!1;UBERON:0005352!1.88e-21!1;UBERON:0005904!3.82e-21!4;UBERON:0006554!2.03e-11!44;UBERON:0001008!3.62e-11!45;UBERON:0001255!4.09e-11!2;UBERON:0001556!4.09e-11!2;UBERON:0000473!6.61e-11!8;UBERON:0000489!2.36e-10!32;UBERON:0005156!1.47e-08!59;UBERON:0000990!1.47e-08!59;UBERON:0007023!3.17e-08!115;UBERON:0002113!2.49e-07!27;UBERON:0003918!2.49e-07!27;UBERON:0005095!2.49e-07!27;UBERON:0007687!2.49e-07!27;UBERON:0003133!5.05e-07!48 | |ontology_enrichment_uberon=UBERON:0003135!2.20e-29!11;UBERON:0006947!8.12e-28!3;UBERON:0004054!8.12e-28!3;UBERON:0003101!1.05e-22!22;UBERON:0000079!1.05e-22!22;UBERON:0001301!1.53e-21!1;UBERON:0001000!1.88e-21!1;UBERON:0005352!1.88e-21!1;UBERON:0005904!3.82e-21!4;UBERON:0006554!2.03e-11!44;UBERON:0001008!3.62e-11!45;UBERON:0001255!4.09e-11!2;UBERON:0001556!4.09e-11!2;UBERON:0000473!6.61e-11!8;UBERON:0000489!2.36e-10!32;UBERON:0005156!1.47e-08!59;UBERON:0000990!1.47e-08!59;UBERON:0007023!3.17e-08!115;UBERON:0002113!2.49e-07!27;UBERON:0003918!2.49e-07!27;UBERON:0005095!2.49e-07!27;UBERON:0007687!2.49e-07!27;UBERON:0003133!5.05e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.79e-88;3!UBERON:0004054;7.79e-88;3!UBERON:0001301;1.23e-66;1!UBERON:0005904;2.83e-66;4!UBERON:0001000;3.34e-66;1!UBERON:0005352;3.34e-66;1!UBERON:0000058;2.22e-27;10!UBERON:0003135;5.16e-25;11!UBERON:0004175;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,6.24e-88,3;UBERON:0004054,6.24e-88,3;UBERON:0001301,1.23e-66,1;UBERON:0001000,2.39e-66,1;UBERON:0005352,2.39e-66,1;UBERON:0005904,2.40e-66,4;UBERON:0003135,4.86e-25,11;UBERON:0000058,4.91e-15,19;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0004175,1.03e-11,25;UBERON:0002113,2.77e-11,26;UBERON:0003918,2.77e-11,26;UBERON:0011143,2.77e-11,26;UBERON:0005095,2.77e-11,26;UBERON:0007687,2.77e-11,26;UBERON:0000489,1.20e-09,31;UBERON:0005103,1.24e-09,8;UBERON:0000083,1.24e-09,8;UBERON:0009201,1.24e-09,8;UBERON:0006553,1.24e-09,8;UBERON:0003074,1.24e-09,8;UBERON:0003060,1.24e-09,8;UBERON:0000080,1.04e-08,9;UBERON:0002120,1.04e-08,9;UBERON:0004875,1.04e-08,9;UBERON:0005721,1.04e-08,9;UBERON:0005754,1.04e-08,9;UBERON:0007297,1.04e-08,9;UBERON:0004876,2.32e-07,11;UBERON:0003887,7.48e-07,12;UBERON:0006554,1.00e-06,47 | |||
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|short_description=p2@OVCH2 | |short_description=p2@OVCH2 | ||
}} | }} |
Latest revision as of 14:09, 24 September 2015
Short description: | p2@OVCH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OVCH2_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -48bp_to_ENST00000534193_5end |
EntrezGene: | OVCH2 |
HGNC: | 29970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 6.24e-88 | 3 |
internal male genitalia | 6.24e-88 | 3 |
epididymis | 1.23e-66 | 1 |
vas deferens | 2.39e-66 | 1 |
spermatic cord | 2.39e-66 | 1 |
duct of male reproductive system | 2.40e-66 | 4 |
male reproductive organ | 4.86e-25 | 11 |
duct | 4.91e-15 | 19 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
internal genitalia | 1.03e-11 | 25 |
kidney | 2.77e-11 | 26 |
kidney mesenchyme | 2.77e-11 | 26 |
upper urinary tract | 2.77e-11 | 26 |
kidney rudiment | 2.77e-11 | 26 |
kidney field | 2.77e-11 | 26 |
cavitated compound organ | 1.20e-09 | 31 |
mesonephric epithelium | 1.24e-09 | 8 |
mesonephric tubule | 1.24e-09 | 8 |
nephric duct | 1.24e-09 | 8 |
renal duct | 1.24e-09 | 8 |
mesonephric duct | 1.24e-09 | 8 |
pronephric duct | 1.24e-09 | 8 |
mesonephros | 1.04e-08 | 9 |
pronephros | 1.04e-08 | 9 |
nephrogenic cord | 1.04e-08 | 9 |
pronephric mesoderm | 1.04e-08 | 9 |
rostral part of nephrogenic cord | 1.04e-08 | 9 |
presumptive pronephric mesoderm | 1.04e-08 | 9 |
urogenital ridge | 2.32e-07 | 11 |
intraembryonic coelom | 7.48e-07 | 12 |
urinary system structure | 1.00e-06 | 47 |