FFCP PHASE1:Hg19::chr11:77185132..77185144,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:77185132..77185144,- to FFCP PHASE1:Hg19::chr11:77185132..77185144,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5058 | |EntrezGene=5058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8590 | |HGNC=8590 | ||
|TSSclassifier=strong | |||
|UniProt=Q13153 | |UniProt=Q13153 | ||
|association_with_transcript=-24bp_to_NM_001128620,NM_002576,uc001oyg.3,uc001oyh.3_5end | |||
|cluster_id=chr11:77185132..77185144,- | |||
|description=CAGE_peak_8_at_PAK1_5end | |||
|id=chr11:77185132..77185144,- | |||
|ontology_enrichment_celltype=CL:0002057!1.07e-14!42;CL:0000860!5.32e-13!45;CL:0000766!3.49e-10!76;CL:0000557!1.53e-08!71;CL:0000839!2.99e-08!70;CL:0002009!5.25e-07!65;CL:0000738!9.94e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.99e-34;33!CL:0002057;2.99e-34;33!CL:0000473;1.52e-22;39!CL:0000234;1.52e-22;39!CL:0000576;3.90e-16;48!CL:0000766;1.32e-14;69!CL:0002322;9.97e-10;5!CL:0000039;2.42e-08;7!CL:0000586;2.42e-08;7!CL:0000097;4.06e-08;5!CL:0000094;1.78e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.60e-30,42;CL:0002057,1.60e-30,42;CL:0000766,3.17e-29,72;CL:0000473,1.82e-25,48;CL:0000234,1.82e-25,48;CL:0000557,2.47e-25,67;CL:0000839,1.88e-22,66;CL:0002009,1.06e-20,61;CL:0000738,2.14e-20,136;CL:0002194,1.86e-18,59;CL:0000576,1.86e-18,59;CL:0000040,1.86e-18,59;CL:0000559,1.86e-18,59;CL:0002031,4.87e-18,120;CL:0000763,1.13e-17,108;CL:0000049,1.13e-17,108;CL:0002032,6.39e-15,161;CL:0000837,6.39e-15,161;CL:0000037,1.06e-13,168;CL:0002087,2.16e-12,115;CL:0000988,2.73e-12,177;CL:0002322,1.09e-09,5;CL:0000039,1.74e-08,7;CL:0000586,1.74e-08,7;CL:0000097,3.70e-08,5;CL:0002028,3.70e-08,5;CL:0000094,1.65e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-22;42 | |||
|ontology_enrichment_disease=DOID:305!8.14e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!7.02e-09!511;UBERON:0000073!4.95e-07!94;UBERON:0001016!4.95e-07!94;UBERON:0001474!5.96e-07!86;UBERON:0005743!6.97e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.46e-08;22!UBERON:0000160;1.00e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.25e-21,76;UBERON:0001474,1.16e-18,82;UBERON:0004765,4.82e-16,90;UBERON:0002405,3.49e-15,93;UBERON:0001434,2.98e-14,100;UBERON:0002390,7.13e-14,98;UBERON:0003061,7.13e-14,98;UBERON:0002193,1.21e-11,108;UBERON:0000160,7.84e-08,17;UBERON:0005409,6.45e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,2.21598876669059,2.05251473624864,2.2826126580967,1.96682138424452,1.15148819429164,0.154816123316076,0,0,0.369754010166788,0,0,0,1.10799081706375,1.20326668482085,0.651032612147555,0,0,0.257575567634187,1.30858414901608,1.13362783106643,3.15359279544161,3.0215774797739,4.93401465626191,8.6717783850629,2.01384674625505,2.56160706529101,5.67557351732605,4.48169384957604,6.45484683583826,9.47985406160392,2.07066573496865,5.45812300115692,5.39336362668203,7.34601341690166,9.62787081228281,21.0981251513684,0.329851300186716,1.19678194572979,2.98357325372886,2.61188314765726,7.94339314567596,11.8336227309159,2.26123798731069,3.12889751052121,7.16723187526885,0.605399502633369,5.89244217580104,4.43047342417238,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,1.76171156811282,1.52909291250092,0,0,0,0.393419540227666,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.868946423296794,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.589405839739707,0,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,9.22462922052443,15.511210565933,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.573609190778008,6.46460642486856,4.37348235460901,5.34492137199785,5.70135802584537,3.5324919122588,1.09493207722749,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,4.42758378755209,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,9.36060152002293,1.32072651019839,1.86595303986695,1.15295962733569,2.5248486685276,0,1.14596527667483,0,0,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,1.42636905040718,0,0,0,0,1.77327684181734,1.2937654491571,1.02674429023799,0.254094624222463,0,0.773288812777695,0.335032530668698,1.91381625495949,2.24702107184155,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0.862856803274467,0.320182673410333,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0.601519410909855,0.828728900423067,0,0,0,0.902399225814824,0,0,2.92278449306521,0.316654886678627,0,0,0.431831832204279,1.54227252690289,0.541892875087706,0,0.254876273045038,0.831076008928724,0,0.438519753291869,0.261435451024901,0.256450125116389,0.328014645699706,0.976135183992909,1.54561517471583,0.457847324091717,0.41254749960294,0.574265537996172,0.650060246036521,0,0.580024309752732,0,0,0,0.107420244868274,0,0.0852266274161009,0.356128142586949,0,0.192190067365106,0.382838137483752,1.4162089319777,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,2.07116361708914,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.284567373393656,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0.605399121573143,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,2.61996756571508,0.146508179271894,0,0,0,0.71623345421307,0.296964680832639,0,0.994147647766298,1.26602474769461,0.556543525114529,0,1.05562704063997,0.398495976502139,0.276283915531148,0.503865495708552,0.102268682502155,0.615424027305347,0,0.179736702294654,4.65455054156584,0,0.295930216910801,0,0,0.969332746095218,0.463840490809256,1.99613798001194,0.7812832832557,0,0,0.1137934482855,1.77977555204936,0.472775363535873,0.344743373241465,0,1.04174996959975,0.885741385813839,0,0,0,0.295547618953547,0.438770794307945,0,0.697118721393016,0.153900517007594,0,1.61394733071642,6.91133861955245,3.80265801727028,0.957003479195758,0.0915975934018623,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0.652931232636591,2.96841450011276,0.432777279484182,3.98104772431402,3.80367527364358,1.83309043480088,0,0,0,0.269604531922708,0,0.468528891450678,0,0.586993856796269,0.242780379534093,0.789168805698781,2.41981432097328,0.30607276163049,0,1.50323419414493,0.518440956986236,0.664653872707185,0.661983911750998,0,1.19472429772959,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.957651272384428,0.34945333648406,0,0,0,0.0821154570532092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| |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,2.21598876669059,2.05251473624864,2.2826126580967,1.96682138424452,1.15148819429164,0.154816123316076,0,0,0.369754010166788,0,0,0,1.10799081706375,1.20326668482085,0.651032612147555,0,0,0.257575567634187,1.30858414901608,1.13362783106643,3.15359279544161,3.0215774797739,4.93401465626191,8.6717783850629,2.01384674625505,2.56160706529101,5.67557351732605,4.48169384957604,6.45484683583826,9.47985406160392,2.07066573496865,5.45812300115692,5.39336362668203,7.34601341690166,9.62787081228281,21.0981251513684,0.329851300186716,1.19678194572979,2.98357325372886,2.61188314765726,7.94339314567596,11.8336227309159,2.26123798731069,3.12889751052121,7.16723187526885,0.605399502633369,5.89244217580104,4.43047342417238,0,0.212604299965044,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,1.76171156811282,1.52909291250092,0,0,0,0.393419540227666,0,0.616804496998528,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.868946423296794,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.589405839739707,0,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,9.22462922052443,15.511210565933,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.573609190778008,6.46460642486856,4.37348235460901,5.34492137199785,5.70135802584537,3.5324919122588,1.09493207722749,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,4.42758378755209,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,9.36060152002293,1.32072651019839,1.86595303986695,1.15295962733569,2.5248486685276,0,1.14596527667483,0,0,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,1.42636905040718,0,0,0,0,1.77327684181734,1.2937654491571,1.02674429023799,0.254094624222463,0,0.773288812777695,0.335032530668698,1.91381625495949,2.24702107184155,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0,0.862856803274467,0.320182673410333,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0.601519410909855,0.828728900423067,0,0,0,0.902399225814824,0,0,2.92278449306521,0.316654886678627,0,0,0.431831832204279,1.54227252690289,0.541892875087706,0,0.254876273045038,0.831076008928724,0,0.438519753291869,0.261435451024901,0.256450125116389,0.328014645699706,0.976135183992909,1.54561517471583,0.457847324091717,0.41254749960294,0.574265537996172,0.650060246036521,0,0.580024309752732,0,0,0,0.107420244868274,0,0.0852266274161009,0.356128142586949,0,0.192190067365106,0.382838137483752,1.4162089319777,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,2.07116361708914,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.284567373393656,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0.605399121573143,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0,0,2.61996756571508,0.146508179271894,0,0,0,0.71623345421307,0.296964680832639,0,0.994147647766298,1.26602474769461,0.556543525114529,0,1.05562704063997,0.398495976502139,0.276283915531148,0.503865495708552,0.102268682502155,0.615424027305347,0,0.179736702294654,4.65455054156584,0,0.295930216910801,0,0,0.969332746095218,0.463840490809256,1.99613798001194,0.7812832832557,0,0,0.1137934482855,1.77977555204936,0.472775363535873,0.344743373241465,0,1.04174996959975,0.885741385813839,0,0,0,0.295547618953547,0.438770794307945,0,0.697118721393016,0.153900517007594,0,1.61394733071642,6.91133861955245,3.80265801727028,0.957003479195758,0.0915975934018623,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0,0.652931232636591,2.96841450011276,0.432777279484182,3.98104772431402,3.80367527364358,1.83309043480088,0,0,0,0.269604531922708,0,0.468528891450678,0,0.586993856796269,0.242780379534093,0.789168805698781,2.41981432097328,0.30607276163049,0,1.50323419414493,0.518440956986236,0.664653872707185,0.661983911750998,0,1.19472429772959,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.957651272384428,0.34945333648406,0,0,0,0.0821154570532092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| ||
|short_description=p8@PAK1 | |||
}} | }} |
Latest revision as of 14:03, 24 September 2015
Short description: | p8@PAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PAK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_NM_001128620, NM_002576, uc001oyg.3, uc001oyh.3_5end |
EntrezGene: | PAK1 |
HGNC: | 8590 |
UniProt: | Q13153 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.60e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.60e-30 | 42 |
myeloid leukocyte | 3.17e-29 | 72 |
defensive cell | 1.82e-25 | 48 |
phagocyte | 1.82e-25 | 48 |
granulocyte monocyte progenitor cell | 2.47e-25 | 67 |
myeloid lineage restricted progenitor cell | 1.88e-22 | 66 |
macrophage dendritic cell progenitor | 1.06e-20 | 61 |
leukocyte | 2.14e-20 | 136 |
monopoietic cell | 1.86e-18 | 59 |
monocyte | 1.86e-18 | 59 |
monoblast | 1.86e-18 | 59 |
promonocyte | 1.86e-18 | 59 |
hematopoietic lineage restricted progenitor cell | 4.87e-18 | 120 |
myeloid cell | 1.13e-17 | 108 |
common myeloid progenitor | 1.13e-17 | 108 |
hematopoietic oligopotent progenitor cell | 6.39e-15 | 161 |
hematopoietic multipotent progenitor cell | 6.39e-15 | 161 |
hematopoietic stem cell | 1.06e-13 | 168 |
nongranular leukocyte | 2.16e-12 | 115 |
hematopoietic cell | 2.73e-12 | 177 |
embryonic stem cell | 1.09e-09 | 5 |
germ line cell | 1.74e-08 | 7 |
germ cell | 1.74e-08 | 7 |
mast cell | 3.70e-08 | 5 |
basophil mast progenitor cell | 3.70e-08 | 5 |
granulocyte | 1.65e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.25e-21 | 76 |
bone element | 1.16e-18 | 82 |
skeletal element | 4.82e-16 | 90 |
immune system | 3.49e-15 | 93 |
skeletal system | 2.98e-14 | 100 |
hematopoietic system | 7.13e-14 | 98 |
blood island | 7.13e-14 | 98 |
hemolymphoid system | 1.21e-11 | 108 |
intestine | 7.84e-08 | 17 |
gastrointestinal system | 6.45e-07 | 25 |