FFCP PHASE1:Hg19::chr11:76883803..76883839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4647 | |EntrezGene=4647 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7606 | |HGNC=7606 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000481328_5end | |association_with_transcript=-35bp_to_ENST00000481328_5end | ||
|cluster_id=chr11:76883803..76883839,+ | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_2_at_MYO7A_5end | |description=CAGE_peak_2_at_MYO7A_5end | ||
|id=chr11:76883803..76883839,+ | |id=chr11:76883803..76883839,+ | ||
|ontology_enrichment_celltype=CL:0002543!1.99e-10!6;CL:0002139!7.26e-10!24;CL:0000115!6.53e-09!35;CL:0000039!9.72e-09!7;CL:0000586!9.72e-09!7;CL:0002322!2.27e-08!5;CL:0000071!3.37e-07!18;CL:0002546!3.37e-07!18 | |ontology_enrichment_celltype=CL:0002543!1.99e-10!6;CL:0002139!7.26e-10!24;CL:0000115!6.53e-09!35;CL:0000039!9.72e-09!7;CL:0000586!9.72e-09!7;CL:0002322!2.27e-08!5;CL:0000071!3.37e-07!18;CL:0002546!3.37e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002543;8.53e-18;6!CL:0000039;2.80e-15;7!CL:0000586;2.80e-15;7!CL:0002618;3.68e-14;3!CL:0002322;4.60e-13;5!CL:0000071;5.19e-08;18!CL:0002139;9.43e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,4.28e-18,6;CL:0000039,2.30e-15,7;CL:0000586,2.30e-15,7;CL:0002618,3.55e-14,3;CL:0002322,4.20e-13,5;CL:0000071,4.02e-08,18;CL:0002546,4.02e-08,18;CL:0000115,5.91e-08,36;CL:0002139,8.72e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.07e-10;7!CL:0002546;5.19e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-18!115;UBERON:0001638!6.73e-09!9;UBERON:0003920!6.73e-09!9;UBERON:0004582!6.73e-09!9;UBERON:0001986!3.37e-07!18;UBERON:0004638!3.37e-07!18;UBERON:0004852!3.37e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;1.13e-16;9!UBERON:0003920;1.13e-16;9!UBERON:0004582;1.13e-16;9!UBERON:0000341;5.32e-09;2!UBERON:0001905;5.32e-09;2!UBERON:0002757;5.32e-09;2!UBERON:0010134;5.32e-09;2!UBERON:0005408;5.32e-09;2!UBERON:0001899;5.32e-09;2!UBERON:0002066;1.17e-08;5!UBERON:0004638;5.19e-08;18!UBERON:0001986;5.19e-08;18!UBERON:0004852;5.19e-08;18!UBERON:0002106;9.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,6.46e-17,9;UBERON:0003920,6.46e-17,9;UBERON:0004582,6.46e-17,9;UBERON:0000341,3.53e-09,2;UBERON:0002066,1.14e-08,5;UBERON:0001905,1.47e-08,2;UBERON:0002757,1.47e-08,2;UBERON:0010134,1.47e-08,2;UBERON:0005408,1.47e-08,2;UBERON:0001899,1.47e-08,2;UBERON:0004638,4.02e-08,18;UBERON:0001986,4.02e-08,18;UBERON:0004852,4.02e-08,18;UBERON:0002106,9.91e-07,3;UBERON:0004854,9.91e-07,3;UBERON:0009034,9.91e-07,3;UBERON:0002095,9.91e-07,3;UBERON:0004782,9.91e-07,3;UBERON:0003281,9.91e-07,3;UBERON:0009664,9.91e-07,3;UBERON:0002296,9.91e-07,3;UBERON:0005602,9.91e-07,3;UBERON:0001179,9.91e-07,3;UBERON:0006293,9.91e-07,3 | |||
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| ||
|short_description=p2@MYO7A | |short_description=p2@MYO7A | ||
}} | }} |
Latest revision as of 13:36, 24 September 2015
Short description: | p2@MYO7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYO7A_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | -35bp_to_ENST00000481328_5end |
EntrezGene: | MYO7A |
HGNC: | 7606 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 4.28e-18 | 6 |
germ line cell | 2.30e-15 | 7 |
germ cell | 2.30e-15 | 7 |
endothelial cell of umbilical vein | 3.55e-14 | 3 |
embryonic stem cell | 4.20e-13 | 5 |
blood vessel endothelial cell | 4.02e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.02e-08 | 18 |
endothelial cell | 5.91e-08 | 36 |
endothelial cell of vascular tree | 8.72e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
vein | 6.46e-17 | 9 |
venous blood vessel | 6.46e-17 | 9 |
venous system | 6.46e-17 | 9 |
throat | 3.53e-09 | 2 |
umbilical vein | 1.14e-08 | 5 |
pineal body | 1.47e-08 | 2 |
regional part of epithalamus | 1.47e-08 | 2 |
secretory circumventricular organ | 1.47e-08 | 2 |
circumventricular organ | 1.47e-08 | 2 |
epithalamus | 1.47e-08 | 2 |
blood vessel endothelium | 4.02e-08 | 18 |
endothelium | 4.02e-08 | 18 |
cardiovascular system endothelium | 4.02e-08 | 18 |
spleen | 9.91e-07 | 3 |
gastrointestinal system mesentery | 9.91e-07 | 3 |
stomach region | 9.91e-07 | 3 |
mesentery | 9.91e-07 | 3 |
gastrointestinal system serosa | 9.91e-07 | 3 |
mesentery of stomach | 9.91e-07 | 3 |
gut mesentery | 9.91e-07 | 3 |
dorsal mesentery | 9.91e-07 | 3 |
dorsal mesogastrium | 9.91e-07 | 3 |
peritoneal cavity | 9.91e-07 | 3 |
spleen primordium | 9.91e-07 | 3 |