FFCP PHASE1:Hg19::chr17:40123919..40123952,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1267 | |EntrezGene=1267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2158 | |HGNC=2158 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_uc002hyn.1_5end | |association_with_transcript=19bp_to_uc002hyn.1_5end | ||
|cluster_id=chr17:40123919..40123952,+ | |||
|coexpression_cluster_id=C1050 | |||
|description=CAGE_peak_6_at_CNP_5end | |description=CAGE_peak_6_at_CNP_5end | ||
|id=chr17:40123919..40123952,+ | |id=chr17:40123919..40123952,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.64e-10;82!UBERON:0006241;1.46e-07;3!UBERON:0003057;1.46e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.12e-21!57;UBERON:0005068!3.12e-21!57;UBERON:0006241!3.12e-21!57;UBERON:0007135!3.12e-21!57;UBERON:0005743!1.43e-19!86;UBERON:0000073!1.45e-19!94;UBERON:0001016!1.45e-19!94;UBERON:0001017!4.52e-19!82;UBERON:0002346!1.97e-18!90;UBERON:0003075!2.49e-18!86;UBERON:0007284!2.49e-18!86;UBERON:0002616!1.37e-17!59;UBERON:0000955!4.01e-17!69;UBERON:0006238!4.01e-17!69;UBERON:0002780!1.67e-14!41;UBERON:0001890!1.67e-14!41;UBERON:0006240!1.67e-14!41;UBERON:0002020!2.30e-14!34;UBERON:0003528!2.30e-14!34;UBERON:0001893!3.43e-14!34;UBERON:0003080!8.25e-14!42;UBERON:0002791!1.15e-13!33;UBERON:0000119!1.26e-13!312;UBERON:0007023!2.00e-13!115;UBERON:0000483!2.53e-13!309;UBERON:0003056!7.59e-13!61;UBERON:0001869!1.04e-12!32;UBERON:0000924!1.38e-12!173;UBERON:0006601!1.38e-12!173;UBERON:0004121!2.62e-12!169;UBERON:0000025!9.05e-11!194;UBERON:0000033!9.73e-11!123;UBERON:0000153!1.21e-10!129;UBERON:0007811!1.21e-10!129;UBERON:0000477!3.80e-10!286;UBERON:0003076!5.59e-09!15;UBERON:0003057!5.59e-09!15;UBERON:0000475!9.42e-09!365;UBERON:0000956!1.30e-08!25;UBERON:0000203!1.30e-08!25;UBERON:0004111!2.24e-08!241;UBERON:0000481!5.30e-08!347;UBERON:0002308!6.36e-08!9;UBERON:0000125!6.36e-08!9;UBERON:0002619!7.03e-08!22;UBERON:0000923!7.90e-08!604;UBERON:0005291!7.90e-08!604;UBERON:0006598!7.90e-08!604;UBERON:0002532!7.90e-08!604;UBERON:0002050!1.05e-07!605;UBERON:0005423!1.05e-07!605;UBERON:0004732!1.46e-07!13;UBERON:0000922!2.38e-07!612;UBERON:0004733!8.58e-07!12;UBERON:0002028!8.58e-07!12;UBERON:0007277!8.58e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.27e-19;6!UBERON:0000125;3.88e-19;9!UBERON:0002308;3.88e-19;9!UBERON:0000988;1.13e-14;3!UBERON:0002780;7.41e-14;41!UBERON:0001890;7.41e-14;41!UBERON:0000073;8.88e-14;53!UBERON:0002616;8.88e-14;53!UBERON:0001017;3.64e-13;75!UBERON:0004732;1.36e-12;13!UBERON:0009663;1.06e-11;7!UBERON:0001897;3.48e-11;2!UBERON:0005162;3.48e-11;2!UBERON:0000122;3.48e-11;2!UBERON:0010225;3.48e-11;2!UBERON:0001893;4.22e-11;34!UBERON:0003528;5.21e-11;34!UBERON:0002020;5.21e-11;34!UBERON:0001875;7.89e-11;2!UBERON:0006514;7.89e-11;2!UBERON:0002148;2.35e-10;2!UBERON:0006331;2.35e-10;2!UBERON:0009662;2.35e-10;2!UBERON:0001016;3.45e-10;83!UBERON:0002791;3.73e-10;32!UBERON:0002021;9.65e-10;5!UBERON:0004733;1.40e-09;12!UBERON:0002028;1.40e-09;12!UBERON:0002420;4.09e-09;9!UBERON:0007245;4.09e-09;9!UBERON:0010009;4.09e-09;9!UBERON:0010011;4.09e-09;9!UBERON:0000454;4.09e-09;9!UBERON:0000955;5.20e-09;68!UBERON:0001869;2.87e-08;32!UBERON:0007023;3.50e-08;114!UBERON:0002240;1.46e-07;3!UBERON:0005174;1.46e-07;3!UBERON:0001137;1.46e-07;3!UBERON:0001896;3.52e-07;3!UBERON:0005290;3.52e-07;3!UBERON:0001894;4.09e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.05e-30,56;UBERON:0005068,5.05e-30,56;UBERON:0006241,5.05e-30,56;UBERON:0007135,5.05e-30,56;UBERON:0001017,1.09e-28,81;UBERON:0001016,8.34e-28,89;UBERON:0000073,1.72e-25,53;UBERON:0002616,1.72e-25,53;UBERON:0000955,1.15e-23,68;UBERON:0006238,1.15e-23,68;UBERON:0003075,1.31e-23,82;UBERON:0007284,1.31e-23,82;UBERON:0002346,2.75e-22,86;UBERON:0007023,3.21e-21,114;UBERON:0002298,8.71e-20,6;UBERON:0000125,1.17e-19,9;UBERON:0002308,1.17e-19,9;UBERON:0010371,2.05e-19,104;UBERON:0002780,2.24e-17,41;UBERON:0001890,2.24e-17,41;UBERON:0003080,2.24e-17,41;UBERON:0006240,2.24e-17,41;UBERON:0004121,8.87e-16,171;UBERON:0000924,8.87e-16,171;UBERON:0006601,8.87e-16,171;UBERON:0010314,9.13e-16,132;UBERON:0000988,2.38e-15,3;UBERON:0003528,5.49e-15,34;UBERON:0002020,5.49e-15,34;UBERON:0003076,6.91e-15,15;UBERON:0003057,6.91e-15,15;UBERON:0003056,1.06e-14,61;UBERON:0004732,7.60e-13,13;UBERON:0001893,2.18e-12,34;UBERON:0009663,7.12e-12,7;UBERON:0005162,3.33e-11,2;UBERON:0000122,3.33e-11,2;UBERON:0001897,3.87e-11,2;UBERON:0010225,3.87e-11,2;UBERON:0001875,4.49e-11,2;UBERON:0006514,4.49e-11,2;UBERON:0002148,7.73e-11,2;UBERON:0006331,7.73e-11,2;UBERON:0009662,7.73e-11,2;UBERON:0011216,9.46e-11,223;UBERON:0002791,1.12e-10,32;UBERON:0004733,8.83e-10,12;UBERON:0002028,8.83e-10,12;UBERON:0007277,8.83e-10,12;UBERON:0002021,9.14e-10,5;UBERON:0002420,3.02e-09,9;UBERON:0007245,3.02e-09,9;UBERON:0010009,3.02e-09,9;UBERON:0010011,3.02e-09,9;UBERON:0000454,3.02e-09,9;UBERON:0000025,3.55e-09,192;UBERON:0001869,2.14e-08,32;UBERON:0002240,1.54e-07,3;UBERON:0005174,1.54e-07,3;UBERON:0001137,1.54e-07,3;UBERON:0001894,4.27e-07,7;UBERON:0006222,4.27e-07,7;UBERON:0004111,4.45e-07,240;UBERON:0001896,4.54e-07,3;UBERON:0005290,4.54e-07,3;UBERON:0010096,4.54e-07,3 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0.436882744260345,0,0.247532705920093,0.662794751455832,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0.123121058076788,0.612002073732759,0.940364164434263,0.286235987131057,0.136874425072884,0.376627918784408,0,0.164201178899891,0,0.393364276848904,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0.72038491523742,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0.989067717114227,0,1.43723628363248,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0,0,0,0,0.206105058476878,0.257640540045629,0.37223371266318,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0.573609190778008,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0,0.404493924480493,0,0.38474715694639,0,0,0,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.122988438543114,0.343135620597051,0.109750285408626,1.1240175325762,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0,0.383382679165211,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0,0,0.571652865261156,0,0.43596006883328,0.22001485746285,0,0,0,1.06375246633948,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0.224170287987055,0,0,0.128343036279748,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0.24538298343828,1.50051156317903,0.542530047399471,0,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0,0.587403472388222,1.02943027143257,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.114814448164607,0.546273504020151,0.393373244878272,0.451199612907412,0.0770153371044148,0,0,0,0,0.680374821106063,0.647747748306418,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.769350375349168,0,0.325378394664303,0.309123034943167,0,0.165018999841176,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.413509717453592,0.214840489736547,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.429374660225974,0,0,0.38126038784765,1.02359116524534,0.855877976067841,0,0,0,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0.731140468893853,0,0,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0,0.6196469961995,0,0,0.294747123039363,0,0,0.211107635297664,0.329294892959902,0.379473173765715,0,0.384888450902048,0,0,0.376575203107117,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0.79312517629427,0.320472213382419,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.540911356951966,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0.307160702099232,0,0.844016498463076,0,0.329607748453519,0,0.19924798825107,0.276283915531148,0,0.306806047506464,0,0.311039587661807,0,0,0,0.295930216910801,0,1.11136990144637,12.6013256992378,2.04089815956073,0,0,0,0,0.227586896570999,0,0,0.344743373241465,0,0.173624994933292,3.54296554325536,0.482385754501632,0,0.221158519862449,0.591095237907095,1.31631238292384,0,0.278847488557207,0.153900517007594,0,0,0,0.108647371922008,0,0.274792780205587,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0,0,0.619202951523374,0,0.296521128680622,0.247127877893006,0.104421949505455,3.2352543830725,0,4.45102446878144,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.518440956986236,0,0.330991955875499,0,0,0.569219092059585,0.138674673013139,0,0.0979923974143777,0,0.34945333648406,0.171986032471617,0.0967563312890851,0,0,0.581934098930517,0.176512253383001,0,0,0,0.316553979779393,0.1955513827348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| ||
|short_description=p6@CNP | |short_description=p6@CNP | ||
}} | }} |
Latest revision as of 07:59, 20 September 2015
Short description: | p6@CNP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CNP_5end |
Coexpression cluster: | C1050_brain_diencephalon_substantia_corpus_occipital_optic_spinal |
Association with transcript: | 19bp_to_uc002hyn.1_5end |
EntrezGene: | CNP |
HGNC: | 2158 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data