FFCP PHASE1:Hg19::chr6:126240380..126240430,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=135112 | |EntrezGene=135112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21081 | |HGNC=21081 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N3C8,Q8NI08 | |UniProt=Q8N3C8,Q8NI08 | ||
|association_with_transcript=10bp_to_NM_001199622_5end | |association_with_transcript=10bp_to_NM_001199622_5end | ||
|cluster_id=chr6:126240380..126240430,+ | |||
|coexpression_cluster_id=C1532 | |coexpression_cluster_id=C1532 | ||
|description=CAGE_peak_2_at_NCOA7_5end | |description=CAGE_peak_2_at_NCOA7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!3.72e-08!254;CL:0000860!7.25e-08!45;CL:0000223!2.27e-07!59 | |ontology_enrichment_celltype=CL:0000066!3.72e-08!254;CL:0000860!7.25e-08!45;CL:0000223!2.27e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.51e-10,253;CL:0000223,2.63e-08,58;CL:0002076,8.92e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.64e-07;29!UBERON:0006595;2.65e-07;86 | |ontology_enrichment_development_v019=UBERON:0008947;1.64e-07;29!UBERON:0006595;2.65e-07;86 | ||
|ontology_enrichment_disease=DOID:305!5.38e-10!106 | |ontology_enrichment_disease=DOID:305!5.38e-10!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.69e-12,106;DOID:162,3.42e-07,235;DOID:0050687,5.68e-07,143;DOID:14566,9.31e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.55e-15!169;UBERON:0000925!3.55e-15!169;UBERON:0006595!3.55e-15!169;UBERON:0001007!1.16e-13!155;UBERON:0001555!1.16e-13!155;UBERON:0007026!1.16e-13!155;UBERON:0004921!3.75e-13!129;UBERON:0004185!3.75e-13!129;UBERON:0000077!2.93e-11!130;UBERON:0000926!2.20e-10!448;UBERON:0004120!2.20e-10!448;UBERON:0006603!2.20e-10!448;UBERON:0001041!4.03e-10!98;UBERON:0001004!7.12e-08!72;UBERON:0001048!3.62e-07!168;UBERON:0005911!5.74e-07!82;UBERON:0001737!5.83e-07!9;UBERON:0000065!7.08e-07!53;UBERON:0003104!8.34e-07!238;UBERON:0009142!8.34e-07!238 | |ontology_enrichment_uberon=UBERON:0004119!3.55e-15!169;UBERON:0000925!3.55e-15!169;UBERON:0006595!3.55e-15!169;UBERON:0001007!1.16e-13!155;UBERON:0001555!1.16e-13!155;UBERON:0007026!1.16e-13!155;UBERON:0004921!3.75e-13!129;UBERON:0004185!3.75e-13!129;UBERON:0000077!2.93e-11!130;UBERON:0000926!2.20e-10!448;UBERON:0004120!2.20e-10!448;UBERON:0006603!2.20e-10!448;UBERON:0001041!4.03e-10!98;UBERON:0001004!7.12e-08!72;UBERON:0001048!3.62e-07!168;UBERON:0005911!5.74e-07!82;UBERON:0001737!5.83e-07!9;UBERON:0000065!7.08e-07!53;UBERON:0003104!8.34e-07!238;UBERON:0009142!8.34e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.29e-07;9!UBERON:0001557;2.29e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.29e-07;9!UBERON:0001557;2.29e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.18e-15,160;UBERON:0000925,3.18e-15,160;UBERON:0006595,3.18e-15,160;UBERON:0001007,2.75e-14,145;UBERON:0001555,2.75e-14,145;UBERON:0007026,2.75e-14,145;UBERON:0004921,1.50e-13,118;UBERON:0001041,1.87e-10,87;UBERON:0001004,3.73e-08,74;UBERON:0005911,1.64e-07,82;UBERON:0001737,2.30e-07,9;UBERON:0001048,4.24e-07,160;UBERON:0000065,7.52e-07,54 | |||
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| ||
|short_description=p2@NCOA7 | |short_description=p2@NCOA7 | ||
}} | }} |
Latest revision as of 07:55, 20 September 2015
Short description: | p2@NCOA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCOA7_5end |
Coexpression cluster: | C1532_CD14_serous_clear_pharyngeal_epidermoid_large_glassy |
Association with transcript: | 10bp_to_NM_001199622_5end |
EntrezGene: | NCOA7 |
HGNC: | 21081 |
UniProt: | Q8N3C8Q8NI08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.51e-10 | 253 |
endodermal cell | 2.63e-08 | 58 |
endo-epithelial cell | 8.92e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.18e-15 | 160 |
endoderm | 3.18e-15 | 160 |
presumptive endoderm | 3.18e-15 | 160 |
digestive system | 2.75e-14 | 145 |
digestive tract | 2.75e-14 | 145 |
primitive gut | 2.75e-14 | 145 |
subdivision of digestive tract | 1.50e-13 | 118 |
foregut | 1.87e-10 | 87 |
respiratory system | 3.73e-08 | 74 |
endo-epithelium | 1.64e-07 | 82 |
larynx | 2.30e-07 | 9 |
primordium | 4.24e-07 | 160 |
respiratory tract | 7.52e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.69e-12 | 106 |
cancer | 3.42e-07 | 235 |
cell type cancer | 5.68e-07 | 143 |
disease of cellular proliferation | 9.31e-07 | 239 |