FFCP PHASE1:Hg19::chr7:100202771..100202805,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5118 | |EntrezGene=5118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8738 | |HGNC=8738 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000486440_5end | |association_with_transcript=0bp_to_ENST00000486440_5end | ||
|cluster_id=chr7:100202771..100202805,+ | |||
|coexpression_cluster_id=C1779 | |||
|description=CAGE_peak_7_at_PCOLCE_5end | |description=CAGE_peak_7_at_PCOLCE_5end | ||
|id=chr7:100202771..100202805,+ | |id=chr7:100202771..100202805,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.48e-48!180;CL:0000057!1.56e-26!75;CL:0000680!8.45e-17!57;CL:0000056!8.45e-17!57;CL:0000355!8.45e-17!57;CL:0000183!2.87e-16!59;CL:0000187!3.50e-16!54;CL:0000393!1.49e-14!60;CL:0000211!1.49e-14!60;CL:0000192!1.84e-11!42;CL:0000514!1.84e-11!42;CL:0002620!8.48e-11!23;CL:0000048!1.74e-10!430;CL:0000723!1.57e-09!436;CL:0000034!3.39e-09!444;CL:0000359!3.10e-07!32;CL:0000499!4.10e-07!27 | |ontology_enrichment_celltype=CL:0000055!7.48e-48!180;CL:0000057!1.56e-26!75;CL:0000680!8.45e-17!57;CL:0000056!8.45e-17!57;CL:0000355!8.45e-17!57;CL:0000183!2.87e-16!59;CL:0000187!3.50e-16!54;CL:0000393!1.49e-14!60;CL:0000211!1.49e-14!60;CL:0000192!1.84e-11!42;CL:0000514!1.84e-11!42;CL:0002620!8.48e-11!23;CL:0000048!1.74e-10!430;CL:0000723!1.57e-09!436;CL:0000034!3.39e-09!444;CL:0000359!3.10e-07!32;CL:0000499!4.10e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.14e-11;23!CL:0000057;2.81e-10;73!CL:0000499;9.25e-10;28!CL:0000187;1.35e-09;55!CL:0002320;1.42e-08;188!CL:0000393;1.48e-08;61!CL:0000211;1.48e-08;61!CL:0000192;2.31e-08;43!CL:0000327;8.39e-08;15!CL:0000134;3.48e-07;55!CL:0000188;4.58e-07;9!CL:0000723;5.12e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.41e-28,76;CL:0000048,2.76e-21,427;CL:0000723,2.38e-20,433;CL:0000034,3.79e-19,441;CL:0000187,2.63e-16,55;CL:0000680,6.75e-16,58;CL:0000056,6.75e-16,58;CL:0000355,6.75e-16,58;CL:0000393,2.72e-14,61;CL:0000211,2.72e-14,61;CL:0002320,9.79e-13,361;CL:0002620,1.23e-11,23;CL:0000192,9.89e-11,43;CL:0000514,9.89e-11,43;CL:0000134,9.26e-10,354;CL:0000499,1.33e-09,28;CL:0000219,8.65e-08,386;CL:0000327,1.22e-07,15;CL:0000188,5.97e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;4.15e-09;58!CL:0000514;2.31e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.16e-21!83;UBERON:0002329!5.16e-21!83;UBERON:0003077!5.16e-21!83;UBERON:0003059!5.16e-21!83;UBERON:0007282!5.16e-21!83;UBERON:0009618!5.16e-21!83;UBERON:0007285!5.16e-21!83;UBERON:0004290!4.30e-19!70;UBERON:0002385!2.60e-17!63;UBERON:0001015!2.60e-17!63;UBERON:0000383!2.60e-17!63;UBERON:0001134!4.90e-17!61;UBERON:0002036!4.90e-17!61;UBERON:0003082!4.90e-17!61;UBERON:0000486!8.04e-16!82;UBERON:0005256!9.46e-13!143;UBERON:0003102!6.94e-11!95;UBERON:0002199!9.17e-11!45;UBERON:0002416!9.17e-11!45;UBERON:0000475!1.20e-09!365;UBERON:0002100!8.33e-09!216;UBERON:0002097!3.05e-08!40;UBERON:0004872!3.07e-07!84;UBERON:0001013!8.77e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.91e-09;198!UBERON:0002385;1.09e-08;31!UBERON:0001015;1.09e-08;31!UBERON:0000383;1.09e-08;31!UBERON:0002204;1.15e-08;70!UBERON:0002199;5.59e-08;46!UBERON:0002416;5.59e-08;46!UBERON:0000075;7.80e-08;16!UBERON:0004905;8.54e-08;8!UBERON:0000982;8.54e-08;8!UBERON:0004770;8.54e-08;8!UBERON:0001013;8.97e-08;14!UBERON:0003102;2.95e-07;50!UBERON:0011135;5.60e-07;5!UBERON:0002216;5.60e-07;5!UBERON:0011134;5.60e-07;5!UBERON:0002209;5.60e-07;5!UBERON:0002213;5.60e-07;5!UBERON:0007844;5.60e-07;5!UBERON:0011138;5.60e-07;5!UBERON:0001130;5.60e-07;5!UBERON:0001066;5.60e-07;5!UBERON:0001468;5.60e-07;5!UBERON:0001434;6.87e-07;36!UBERON:0002097;7.00e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.71e-17,73;UBERON:0002329,1.13e-16,71;UBERON:0003059,1.13e-16,71;UBERON:0007282,1.13e-16,71;UBERON:0004290,1.13e-16,71;UBERON:0009618,1.13e-16,71;UBERON:0003077,3.06e-16,72;UBERON:0007285,3.06e-16,72;UBERON:0001134,3.62e-16,62;UBERON:0002036,3.62e-16,62;UBERON:0003082,3.62e-16,62;UBERON:0002385,3.01e-15,64;UBERON:0001015,3.01e-15,64;UBERON:0000383,3.01e-15,64;UBERON:0000486,2.93e-14,83;UBERON:0007503,6.84e-14,78;UBERON:0003102,2.37e-13,99;UBERON:0002199,1.78e-12,46;UBERON:0002416,1.78e-12,46;UBERON:0002384,2.91e-12,371;UBERON:0003104,1.41e-11,160;UBERON:0009142,1.41e-11,160;UBERON:0005256,2.15e-11,122;UBERON:0002097,4.54e-09,41;UBERON:0002204,4.84e-08,167;UBERON:0001013,6.57e-08,14;UBERON:0004905,8.82e-08,8;UBERON:0000982,8.82e-08,8;UBERON:0004770,8.82e-08,8;UBERON:0000075,9.53e-08,16;UBERON:0011135,5.79e-07,5;UBERON:0002216,5.79e-07,5;UBERON:0011134,5.79e-07,5;UBERON:0002209,5.79e-07,5;UBERON:0002213,5.79e-07,5;UBERON:0005856,5.79e-07,5;UBERON:0005866,5.79e-07,5;UBERON:0005863,5.79e-07,5;UBERON:0007844,5.79e-07,5;UBERON:0011138,5.79e-07,5;UBERON:0001130,5.79e-07,5;UBERON:0001066,5.79e-07,5;UBERON:0001468,5.79e-07,5 | |||
|phase1_expression=1.09007027562334,2.99740733447376,1.55049844505568,2.00146596706261,1.34088328328186,4.36169262050184,2.53299878168311,17.0564365825244,6.52964070499596,0,0,0,0,7.05468211872266,7.95353701746998,2.6893005858071,1.80808358407193,2.19093027116212,0.975865597581014,0.123121058076788,0.816002764977012,0.940364164434263,0,0,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.69490601792545,0.639312809217652,9.03597880961416,6.51739283826656,8.25625158076695,11.1340032587154,4.86634870302636,0.0945348171640679,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0.81014194788176,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.993943903390637,3.67228483827281,1.05927344650575,29.257335316379,8.51204117276057,0.560677600142307,1.06748995729705,1.48000529050296,0.622422070799533,1.0776853765575,1.63461903113459,4.23800797405808,4.60940739583999,0.937285727335186,6.55536161343673,0.570471821544449,5.38015249986484,0.822041490506354,0.647491777472526,0.280901613404497,2.04154171254893,1.84251475967652,4.85631171526098,10.6920257155385,12.857880322485,1.82032272387605,5.03032699271367,1.0100166837244,1.7516592782075,1.38532057742091,4.38977620880838,3.67785354958824,7.36166488642324,0.226864366320042,4.12596162084383,8.32873816392413,4.02670612203168,4.50136644126603,4.94652140344507,4.12224864073007,5.95573940261087,3.71307930930786,3.99491721160914,3.78650661366172,6.25939310767636,10.6686397500416,5.68015348026583,1.81353776809752,1.86516651541536,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0.348581828608555,0.310983165046111,0,0.36497735907583,0,7.71889125831462,2.76269842704961,5.10804720835177,2.88751792667834,0,0,0.241011029883482,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,0,0,1.77236972004421,0,0.122988438543114,0.514703430895577,0,0,0,0,1.62904152655162,3.11980435583874,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,2.34434894420094,1.71072446022705,0.205654985406647,0,0.285826432630578,1.12131084345361,0.87192013766656,1.3200891447771,1.42198887333556,46.4953379607447,1.690605505112,6.91439103120663,8.32059495290929,3.85811061393213,0,2.66422179016099,1.00084595560703,14.650783345569,2.46972101034231,0.325736184293735,0.710783897485092,1.58390374586686,0,0,0,0,0,0,0.239624855491583,4.59447743336456,1.42636905040718,0.579125226670317,3.08214483825575,0.358121926479791,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,14.2322130394202,23.5080144898048,7.32415563989286,2.07970861530807,2.85486382075459,2.68094105557689,1.99140405487612,6.92176029373754,31.8370505678379,22.7640756843511,1.99267679560631,2.02806085395873,5.21301686808497,11.1606659753762,18.8728883095971,0,0,0,0,0,0.604780586659361,0.992431231275107,0.460385919864187,2.80660094433074,1.66580894032411,1.53512174720011,0.965123526861645,0,4.1636617326717,7.81271591377759,3.03870477251094,9.8658341544888,4.29978400301849,0.241718899183244,0,0,2.64073230778596,6.00900854422166,14.6859344754555,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,1.75169719801128,1.46511143709349,0.907604499126468,0.574265537996172,0,1.6068392984416,4.64019447802185,1.3864375540318,2.45605879561807,1.10269257987624,4.18938954986267,4.0604674295984,1.87498580315422,3.29418531892928,0,0,0,0,2.32422774648643,18.8887408098384,1.3940745403212,3.38836938193698,1.06461206063404,0,3.33583594387056,0,1.116475108079,0.632758849437452,0.190630193923825,4.60616024360401,5.13526785640705,3.5002357271853,2.35484592059769,2.15846949099978,0.823611089208164,1.7671860351853,0.606547444719948,1.58510321173008,0.421258456238981,1.46290121726877,4.14312932373184,3.16950440270266,5.32349654491144,5.79762271010222,5.65040583101214,1.65409603063837,0,0,4.6302042741335,9.83842128069949,0.202910376962704,0.6196469961995,0.563391205064483,1.29070216983646,0.982490410131212,1.07001315444375,2.83808851256478,10.5553817648832,13.1717957183961,3.41525856389144,7.69856384538962,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0.334330152832435,0,0.23874448473769,0,0,0,0,0.445234820091624,0,0,0.796991953004279,0.552567831062295,0,0.102268682502155,0,0.933118762985422,0,0,0,0.789147245095469,0,0,0,0,0,0,0.0874599999961957,2.89999830173917,0,0,0,0.344743373241465,0.291604613383254,0.520874984799877,0,0,0,0.110579259931225,0,0,0.653630781113941,0,4.15531395920504,0,0,0.448788222048861,0.108647371922008,0,2.10674464824283,0,0,0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| ||
|short_description=p7@PCOLCE | |short_description=p7@PCOLCE | ||
}} | }} |
Latest revision as of 07:47, 20 September 2015
Short description: | p7@PCOLCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PCOLCE_5end |
Coexpression cluster: | C1779_Osteoblast_Fibroblast_Mesenchymal_Smooth_normal_Pericytes_Nucleus |
Association with transcript: | 0bp_to_ENST00000486440_5end |
EntrezGene: | PCOLCE |
HGNC: | 8738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.41e-28 | 76 |
multi fate stem cell | 2.76e-21 | 427 |
somatic stem cell | 2.38e-20 | 433 |
stem cell | 3.79e-19 | 441 |
muscle cell | 2.63e-16 | 55 |
muscle precursor cell | 6.75e-16 | 58 |
myoblast | 6.75e-16 | 58 |
multi-potent skeletal muscle stem cell | 6.75e-16 | 58 |
electrically responsive cell | 2.72e-14 | 61 |
electrically active cell | 2.72e-14 | 61 |
connective tissue cell | 9.79e-13 | 361 |
skin fibroblast | 1.23e-11 | 23 |
smooth muscle cell | 9.89e-11 | 43 |
smooth muscle myoblast | 9.89e-11 | 43 |
mesenchymal cell | 9.26e-10 | 354 |
stromal cell | 1.33e-09 | 28 |
motile cell | 8.65e-08 | 386 |
extracellular matrix secreting cell | 1.22e-07 | 15 |
cell of skeletal muscle | 5.97e-07 | 9 |