FFCP PHASE1:Hg19::chr1:207277572..207277587,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=722 | |EntrezGene=722 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1325 | |HGNC=1325 | ||
|TSSclassifier=strong | |||
|UniProt=P04003,Q5VVQ8 | |UniProt=P04003,Q5VVQ8 | ||
|association_with_transcript=-19bp_to_ENST00000367070,NM_000715,uc001hfo.2_5end | |association_with_transcript=-19bp_to_ENST00000367070,NM_000715,uc001hfo.2_5end | ||
|cluster_id=chr1:207277572..207277587,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_C4BPA_5end | |description=CAGE_peak_4_at_C4BPA_5end | ||
|id=chr1:207277572..207277587,+ | |id=chr1:207277572..207277587,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.01e-19!12;CL:0000417!6.01e-19!12;CL:0000668!6.01e-19!12;CL:0000414!6.01e-19!12;CL:0000412!6.01e-19!12;CL:0000182!6.01e-19!12;CL:0002150!1.43e-10!3;CL:0000861!1.43e-10!3;CL:0000223!6.23e-09!59 | |ontology_enrichment_celltype=CL:0000181!6.01e-19!12;CL:0000417!6.01e-19!12;CL:0000668!6.01e-19!12;CL:0000414!6.01e-19!12;CL:0000412!6.01e-19!12;CL:0000182!6.01e-19!12;CL:0002150!1.43e-10!3;CL:0000861!1.43e-10!3;CL:0000223!6.23e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.43e-32;12!CL:0002563;8.54e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.04e-32,12;CL:0000223,8.60e-15,58;CL:0002563,7.89e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.05e-25;11!UBERON:0009497;1.08e-21;13!UBERON:0001041;2.82e-20;30!UBERON:0003104;5.64e-12;31!CL:0000223;7.53e-10;58 | |||
|ontology_enrichment_disease=DOID:3493!9.59e-08!2;DOID:305!3.06e-07!106 | |ontology_enrichment_disease=DOID:3493!9.59e-08!2;DOID:305!3.06e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.75e-18!19;UBERON:0006925!4.75e-18!19;UBERON:0008836!4.75e-18!19;UBERON:0005057!6.14e-18!26;UBERON:0004921!7.48e-16!129;UBERON:0004185!7.48e-16!129;UBERON:0008835!2.72e-15!22;UBERON:0003894!2.72e-15!22;UBERON:0009854!1.56e-14!23;UBERON:0001041!1.07e-13!98;UBERON:0003929!2.04e-13!54;UBERON:0000077!2.67e-13!130;UBERON:0007499!3.37e-13!25;UBERON:0009497!3.37e-13!25;UBERON:0000015!3.37e-13!25;UBERON:0002423!3.37e-13!25;UBERON:0006235!3.37e-13!25;UBERON:0004161!3.37e-13!25;UBERON:0001007!4.43e-13!155;UBERON:0001555!4.43e-13!155;UBERON:0007026!4.43e-13!155;UBERON:0005911!8.05e-13!82;UBERON:0009856!1.31e-12!26;UBERON:0002368!1.55e-12!35;UBERON:0004119!2.18e-12!169;UBERON:0000925!2.18e-12!169;UBERON:0006595!2.18e-12!169;UBERON:0000949!7.25e-11!45;UBERON:0002365!3.11e-10!31;UBERON:0002330!3.11e-10!31;UBERON:0002530!7.45e-09!59;UBERON:0005172!2.01e-08!55;UBERON:0005173!2.01e-08!55;UBERON:0005177!9.50e-08!107;UBERON:0002417!2.56e-07!61;UBERON:0000916!2.56e-07!61 | |ontology_enrichment_uberon=UBERON:0002107!4.75e-18!19;UBERON:0006925!4.75e-18!19;UBERON:0008836!4.75e-18!19;UBERON:0005057!6.14e-18!26;UBERON:0004921!7.48e-16!129;UBERON:0004185!7.48e-16!129;UBERON:0008835!2.72e-15!22;UBERON:0003894!2.72e-15!22;UBERON:0009854!1.56e-14!23;UBERON:0001041!1.07e-13!98;UBERON:0003929!2.04e-13!54;UBERON:0000077!2.67e-13!130;UBERON:0007499!3.37e-13!25;UBERON:0009497!3.37e-13!25;UBERON:0000015!3.37e-13!25;UBERON:0002423!3.37e-13!25;UBERON:0006235!3.37e-13!25;UBERON:0004161!3.37e-13!25;UBERON:0001007!4.43e-13!155;UBERON:0001555!4.43e-13!155;UBERON:0007026!4.43e-13!155;UBERON:0005911!8.05e-13!82;UBERON:0009856!1.31e-12!26;UBERON:0002368!1.55e-12!35;UBERON:0004119!2.18e-12!169;UBERON:0000925!2.18e-12!169;UBERON:0006595!2.18e-12!169;UBERON:0000949!7.25e-11!45;UBERON:0002365!3.11e-10!31;UBERON:0002330!3.11e-10!31;UBERON:0002530!7.45e-09!59;UBERON:0005172!2.01e-08!55;UBERON:0005173!2.01e-08!55;UBERON:0005177!9.50e-08!107;UBERON:0002417!2.56e-07!61;UBERON:0000916!2.56e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.28e-33;19!UBERON:0006925;3.28e-33;19!UBERON:0002423;6.15e-25;25!UBERON:0002365;2.70e-19;31!UBERON:0002330;2.70e-19;31!UBERON:0002368;6.77e-17;33!UBERON:0000949;3.47e-14;43!UBERON:0002171;1.43e-09;1!UBERON:0006518;1.43e-09;1!UBERON:0008949;1.43e-09;1!UBERON:0000101;1.43e-09;1!UBERON:0002167;1.43e-09;1!UBERON:0001242;8.54e-09;4!UBERON:0001262;8.54e-09;4!UBERON:0004786;8.54e-09;4!UBERON:0004808;8.54e-09;4!UBERON:0001277;8.54e-09;4!UBERON:0002530;1.05e-07;57!UBERON:0001007;1.20e-07;81!UBERON:0005172;1.72e-07;52!UBERON:0005173;1.72e-07;52!UBERON:0002417;5.74e-07;58!UBERON:0000916;5.74e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.74e-33,19;UBERON:0006925,3.74e-33,19;UBERON:0008836,3.74e-33,19;UBERON:0008835,1.84e-28,22;UBERON:0003894,1.84e-28,22;UBERON:0009854,3.60e-27,23;UBERON:0007499,6.80e-25,25;UBERON:0009497,6.80e-25,25;UBERON:0000015,6.80e-25,25;UBERON:0002423,6.80e-25,25;UBERON:0006235,6.80e-25,25;UBERON:0004161,6.80e-25,25;UBERON:0009856,6.90e-24,26;UBERON:0002365,7.95e-20,31;UBERON:0002330,7.95e-20,31;UBERON:0005911,2.66e-19,82;UBERON:0003929,2.67e-19,54;UBERON:0002368,2.07e-17,35;UBERON:0000949,2.67e-16,45;UBERON:0004921,2.33e-14,118;UBERON:0001041,2.30e-13,87;UBERON:0002530,4.62e-12,59;UBERON:0001007,3.62e-11,145;UBERON:0001555,3.62e-11,145;UBERON:0007026,3.62e-11,145;UBERON:0005177,3.69e-11,101;UBERON:0005172,8.14e-11,54;UBERON:0005173,8.14e-11,54;UBERON:0004119,7.42e-10,160;UBERON:0000925,7.42e-10,160;UBERON:0006595,7.42e-10,160;UBERON:0002417,1.34e-09,60;UBERON:0000916,1.34e-09,60;UBERON:0002171,1.43e-09,1;UBERON:0006518,1.43e-09,1;UBERON:0008949,1.43e-09,1;UBERON:0000101,1.43e-09,1;UBERON:0002167,1.43e-09,1;UBERON:0001242,7.89e-09,4;UBERON:0001262,7.89e-09,4;UBERON:0004786,7.89e-09,4;UBERON:0004808,7.89e-09,4;UBERON:0001277,7.89e-09,4;UBERON:0009569,2.63e-08,112;UBERON:0011216,3.98e-07,223 | |||
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| ||
|short_description=p4@C4BPA | |short_description=p4@C4BPA | ||
}} | }} |
Latest revision as of 07:23, 20 September 2015
Short description: | p4@C4BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C4BPA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -19bp_to_ENST00000367070, NM_000715, uc001hfo.2_5end |
EntrezGene: | C4BPA |
HGNC: | 1325 |
UniProt: | P04003Q5VVQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.04e-32 | 12 |
endodermal cell | 8.60e-15 | 58 |
intestinal epithelial cell | 7.89e-09 | 4 |