FFCP PHASE1:Hg19::chr1:207262720..207262753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=725 | |EntrezGene=725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |HGNC=1328 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_uc010pse.1_5end | |association_with_transcript=-73bp_to_uc010pse.1_5end | ||
|cluster_id=chr1:207262720..207262753,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_C4BPB_5end | |description=CAGE_peak_6_at_C4BPB_5end | ||
|id=chr1:207262720..207262753,+ | |id=chr1:207262720..207262753,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.68e-08!19;CL:0000181!2.34e-07!12;CL:0000417!2.34e-07!12;CL:0000668!2.34e-07!12;CL:0000414!2.34e-07!12;CL:0000412!2.34e-07!12;CL:0000182!2.34e-07!12;CL:0002150!2.61e-07!3;CL:0000861!2.61e-07!3;CL:0002541!7.80e-07!3 | |ontology_enrichment_celltype=CL:0000077!1.68e-08!19;CL:0000181!2.34e-07!12;CL:0000417!2.34e-07!12;CL:0000668!2.34e-07!12;CL:0000414!2.34e-07!12;CL:0000412!2.34e-07!12;CL:0000182!2.34e-07!12;CL:0002150!2.61e-07!3;CL:0000861!2.61e-07!3;CL:0002541!7.80e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.85e-09;19!CL:0002541;1.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,4.03e-09,19;CL:0002541,1.28e-07,3;CL:0000066,1.52e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.23e-13;29 | |||
|ontology_enrichment_disease=DOID:305!5.33e-07!106 | |ontology_enrichment_disease=DOID:305!5.33e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.83e-09,106;DOID:162,2.76e-08,235;DOID:14566,5.27e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.41e-19!9;UBERON:0004921!1.97e-12!129;UBERON:0004185!1.97e-12!129;UBERON:0001557!2.34e-11!19;UBERON:0000077!6.12e-11!130;UBERON:0001007!1.37e-10!155;UBERON:0001555!1.37e-10!155;UBERON:0007026!1.37e-10!155;UBERON:0008835!1.64e-10!22;UBERON:0003894!1.64e-10!22;UBERON:0009497!1.67e-10!25;UBERON:0000015!1.67e-10!25;UBERON:0002423!1.67e-10!25;UBERON:0006235!1.67e-10!25;UBERON:0004161!1.67e-10!25;UBERON:0001041!1.73e-10!98;UBERON:0009854!6.37e-10!23;UBERON:0004119!1.56e-09!169;UBERON:0000925!1.56e-09!169;UBERON:0006595!1.56e-09!169;UBERON:0007499!6.90e-09!25;UBERON:0003929!7.93e-09!54;UBERON:0009856!1.97e-08!26;UBERON:0002368!1.97e-07!35;UBERON:0002394!2.07e-07!4;UBERON:0003928!2.07e-07!4;UBERON:0002107!3.71e-07!19;UBERON:0006925!3.71e-07!19;UBERON:0008836!3.71e-07!19;UBERON:0000476!7.80e-07!3;UBERON:0000920!7.80e-07!3;UBERON:0000949!7.80e-07!45;UBERON:0005057!8.38e-07!26 | |ontology_enrichment_uberon=UBERON:0001737!3.41e-19!9;UBERON:0004921!1.97e-12!129;UBERON:0004185!1.97e-12!129;UBERON:0001557!2.34e-11!19;UBERON:0000077!6.12e-11!130;UBERON:0001007!1.37e-10!155;UBERON:0001555!1.37e-10!155;UBERON:0007026!1.37e-10!155;UBERON:0008835!1.64e-10!22;UBERON:0003894!1.64e-10!22;UBERON:0009497!1.67e-10!25;UBERON:0000015!1.67e-10!25;UBERON:0002423!1.67e-10!25;UBERON:0006235!1.67e-10!25;UBERON:0004161!1.67e-10!25;UBERON:0001041!1.73e-10!98;UBERON:0009854!6.37e-10!23;UBERON:0004119!1.56e-09!169;UBERON:0000925!1.56e-09!169;UBERON:0006595!1.56e-09!169;UBERON:0007499!6.90e-09!25;UBERON:0003929!7.93e-09!54;UBERON:0009856!1.97e-08!26;UBERON:0002368!1.97e-07!35;UBERON:0002394!2.07e-07!4;UBERON:0003928!2.07e-07!4;UBERON:0002107!3.71e-07!19;UBERON:0006925!3.71e-07!19;UBERON:0008836!3.71e-07!19;UBERON:0000476!7.80e-07!3;UBERON:0000920!7.80e-07!3;UBERON:0000949!7.80e-07!45;UBERON:0005057!8.38e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.81e-47;9!UBERON:0001557;1.81e-47;9!UBERON:0000072;7.23e-10;37!UBERON:0000065;2.47e-08;44!UBERON:0003124;1.19e-07;3!UBERON:0000920;1.19e-07;3!UBERON:0002423;2.97e-07;25!UBERON:0002107;4.62e-07;19!UBERON:0006925;4.62e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.86e-47,9;UBERON:0001557,1.19e-21,19;UBERON:0001041,9.81e-11,87;UBERON:0004921,1.56e-10,118;UBERON:0008947,5.02e-10,38;UBERON:0003258,5.02e-10,38;UBERON:0008835,2.32e-08,22;UBERON:0003894,2.32e-08,22;UBERON:0009854,5.71e-08,23;UBERON:0001007,7.19e-08,145;UBERON:0001555,7.19e-08,145;UBERON:0007026,7.19e-08,145;UBERON:0000072,8.33e-08,47;UBERON:0004119,1.02e-07,160;UBERON:0000925,1.02e-07,160;UBERON:0006595,1.02e-07,160;UBERON:0000920,1.28e-07,3;UBERON:0007499,2.79e-07,25;UBERON:0009497,2.79e-07,25;UBERON:0000015,2.79e-07,25;UBERON:0002423,2.79e-07,25;UBERON:0006235,2.79e-07,25;UBERON:0004161,2.79e-07,25;UBERON:0002107,4.59e-07,19;UBERON:0006925,4.59e-07,19;UBERON:0008836,4.59e-07,19;UBERON:0009856,5.63e-07,26;UBERON:0003124,5.69e-07,7 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0,0,0.276350017785848,0,2.07601188426885,0.535081656179426,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4109984035063,10.1150814046861,7.71235295627142,10.367633436845,9.36881609597346,8.77901290711057,9.43819157121151,9.02618739576592,9.61867892365976,0,0,0,0,34.2238594018943,36.3646070170722,27.767125614026,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0.19924798825107,0,0,0,0.492339221844278,0,1.88723537409386,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,1.41620002574687,0,0,0.113942055847001,0,0,0.108647371922008,0.638002319463839,1.19076871422421,2.66517388009317,1.02193298195737,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,4.547547570587,6.5780385377567,4.68058105203293,0.0969890164884194,0,0,0,0,0,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0,0,0.945398187686684,0.247247575143499,0.741438982396034,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2931635740137,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.363697318405119,0,1.39210127963548,0,0,0,0,0,0.192619830407303,3.00218227924896,1.04397716786085,5.44094221229454,0,2.44736704506468,0.537266523244462,0.308801447160972,1.53498834705095,0,0,0,0,0.345430341731199,2.73473960559644,0,0,0,0,0,2.94927490504463,0,0.39997479170986,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0,0.156986185701028,0,2.80272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0,0,0.124149428591716,0.112131862580613,0.0636471582781649,0,0,0.342233301085281,0,0.860666464712116,0,0,0,0,0.988077223172456,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p6@C4BPB | |short_description=p6@C4BPB | ||
}} | }} |
Latest revision as of 07:15, 20 September 2015
Short description: | p6@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C4BPB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -73bp_to_uc010pse.1_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 4.03e-09 | 19 |
chorionic membrane mesenchymal stem cell | 1.28e-07 | 3 |
epithelial cell | 1.52e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.86e-47 | 9 |
upper respiratory tract | 1.19e-21 | 19 |
foregut | 9.81e-11 | 87 |
subdivision of digestive tract | 1.56e-10 | 118 |
respiratory primordium | 5.02e-10 | 38 |
endoderm of foregut | 5.02e-10 | 38 |
hepatic diverticulum | 2.32e-08 | 22 |
liver primordium | 2.32e-08 | 22 |
digestive tract diverticulum | 5.71e-08 | 23 |
digestive system | 7.19e-08 | 145 |
digestive tract | 7.19e-08 | 145 |
primitive gut | 7.19e-08 | 145 |
segment of respiratory tract | 8.33e-08 | 47 |
endoderm-derived structure | 1.02e-07 | 160 |
endoderm | 1.02e-07 | 160 |
presumptive endoderm | 1.02e-07 | 160 |
egg chorion | 1.28e-07 | 3 |
epithelial sac | 2.79e-07 | 25 |
epithelium of foregut-midgut junction | 2.79e-07 | 25 |
anatomical boundary | 2.79e-07 | 25 |
hepatobiliary system | 2.79e-07 | 25 |
foregut-midgut junction | 2.79e-07 | 25 |
septum transversum | 2.79e-07 | 25 |
liver | 4.59e-07 | 19 |
digestive gland | 4.59e-07 | 19 |
liver bud | 4.59e-07 | 19 |
sac | 5.63e-07 | 26 |
chorion | 5.69e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.83e-09 | 106 |
cancer | 2.76e-08 | 235 |
disease of cellular proliferation | 5.27e-08 | 239 |