FFCP PHASE1:Hg19::chr1:207262293..207262306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=725 | |EntrezGene=725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |HGNC=1328 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VVQ7 | |UniProt=Q5VVQ7 | ||
|association_with_transcript=-251bp_to_ENST00000452902_5end | |association_with_transcript=-251bp_to_ENST00000452902_5end | ||
|cluster_id=chr1:207262293..207262306,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_17_at_C4BPB_5end | |description=CAGE_peak_17_at_C4BPB_5end | ||
|id=chr1:207262293..207262306,+ | |id=chr1:207262293..207262306,+ | ||
|ontology_enrichment_celltype=CL:0002150!1.20e-15!3;CL:0000861!1.20e-15!3;CL:0000066!1.07e-11!254;CL:0000077!1.80e-08!19;CL:0002541!4.13e-07!3;CL:0002178!5.31e-07!3 | |ontology_enrichment_celltype=CL:0002150!1.20e-15!3;CL:0000861!1.20e-15!3;CL:0000066!1.07e-11!254;CL:0000077!1.80e-08!19;CL:0002541!4.13e-07!3;CL:0002178!5.31e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.13e-49;29!UBERON:0006595;3.32e-08;86 | |||
|ontology_enrichment_disease=DOID:305!5.14e-21!106;DOID:0050687!3.69e-14!143;DOID:162!5.77e-11!235;DOID:14566!1.32e-10!239;DOID:3493!1.86e-10!2;DOID:3119!3.16e-08!14 | |ontology_enrichment_disease=DOID:305!5.14e-21!106;DOID:0050687!3.69e-14!143;DOID:162!5.77e-11!235;DOID:14566!1.32e-10!239;DOID:3493!1.86e-10!2;DOID:3119!3.16e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.99e-16,106;DOID:0050687,5.19e-12,143;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.68e-45!9;UBERON:0001557!5.03e-25!19;UBERON:0008947!1.61e-16!38;UBERON:0003258!1.61e-16!38;UBERON:0004119!4.54e-16!169;UBERON:0000925!4.54e-16!169;UBERON:0006595!4.54e-16!169;UBERON:0004921!4.72e-16!129;UBERON:0004185!4.72e-16!129;UBERON:0000077!5.51e-16!130;UBERON:0001007!3.80e-15!155;UBERON:0001555!3.80e-15!155;UBERON:0007026!3.80e-15!155;UBERON:0000072!3.28e-13!46;UBERON:0000065!4.45e-13!53;UBERON:0001041!5.77e-12!98;UBERON:0002294!4.64e-11!7;UBERON:0001173!4.64e-11!7;UBERON:0004912!4.64e-11!7;UBERON:0001004!6.63e-09!72;UBERON:0000063!2.95e-08!97;UBERON:0005409!2.88e-07!35;UBERON:0002110!2.92e-07!3;UBERON:0006242!2.92e-07!3;UBERON:0000476!4.13e-07!3;UBERON:0000920!4.13e-07!3 | |ontology_enrichment_uberon=UBERON:0001737!3.68e-45!9;UBERON:0001557!5.03e-25!19;UBERON:0008947!1.61e-16!38;UBERON:0003258!1.61e-16!38;UBERON:0004119!4.54e-16!169;UBERON:0000925!4.54e-16!169;UBERON:0006595!4.54e-16!169;UBERON:0004921!4.72e-16!129;UBERON:0004185!4.72e-16!129;UBERON:0000077!5.51e-16!130;UBERON:0001007!3.80e-15!155;UBERON:0001555!3.80e-15!155;UBERON:0007026!3.80e-15!155;UBERON:0000072!3.28e-13!46;UBERON:0000065!4.45e-13!53;UBERON:0001041!5.77e-12!98;UBERON:0002294!4.64e-11!7;UBERON:0001173!4.64e-11!7;UBERON:0004912!4.64e-11!7;UBERON:0001004!6.63e-09!72;UBERON:0000063!2.95e-08!97;UBERON:0005409!2.88e-07!35;UBERON:0002110!2.92e-07!3;UBERON:0006242!2.92e-07!3;UBERON:0000476!4.13e-07!3;UBERON:0000920!4.13e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.13e-160;9!UBERON:0001557;2.13e-160;9!UBERON:0000072;4.62e-36;37!UBERON:0000065;2.20e-30;44!UBERON:0001004;6.89e-16;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.23e-160,9;UBERON:0001557,4.83e-76,19;UBERON:0008947,6.78e-38,38;UBERON:0003258,6.78e-38,38;UBERON:0000072,1.43e-30,47;UBERON:0000065,1.47e-26,54;UBERON:0001004,2.93e-19,74;UBERON:0001041,2.63e-16,87;UBERON:0004921,1.47e-14,118;UBERON:0001007,9.58e-12,145;UBERON:0001555,9.58e-12,145;UBERON:0007026,9.58e-12,145;UBERON:0004119,1.38e-10,160;UBERON:0000925,1.38e-10,160;UBERON:0006595,1.38e-10,160;UBERON:0001048,1.38e-08,160;UBERON:0011216,2.78e-07,223 | |||
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|short_description=p17@C4BPB | |short_description=p17@C4BPB | ||
}} | }} |
Latest revision as of 07:09, 20 September 2015
Short description: | p17@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_C4BPB_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -251bp_to_ENST00000452902_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | Q5VVQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.23e-160 | 9 |
upper respiratory tract | 4.83e-76 | 19 |
respiratory primordium | 6.78e-38 | 38 |
endoderm of foregut | 6.78e-38 | 38 |
segment of respiratory tract | 1.43e-30 | 47 |
respiratory tract | 1.47e-26 | 54 |
respiratory system | 2.93e-19 | 74 |
foregut | 2.63e-16 | 87 |
subdivision of digestive tract | 1.47e-14 | 118 |
digestive system | 9.58e-12 | 145 |
digestive tract | 9.58e-12 | 145 |
primitive gut | 9.58e-12 | 145 |
endoderm-derived structure | 1.38e-10 | 160 |
endoderm | 1.38e-10 | 160 |
presumptive endoderm | 1.38e-10 | 160 |
primordium | 1.38e-08 | 160 |
organ system subdivision | 2.78e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.99e-16 | 106 |
cell type cancer | 5.19e-12 | 143 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |