FFCP PHASE1:Hg19::chr1:207262232..207262254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=725 | |EntrezGene=725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |HGNC=1328 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492730_5end | |association_with_transcript=0bp_to_ENST00000492730_5end | ||
|cluster_id=chr1:207262232..207262254,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_2_at_C4BPB_5end | |description=CAGE_peak_2_at_C4BPB_5end | ||
|id=chr1:207262232..207262254,+ | |id=chr1:207262232..207262254,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.33e-11!254;CL:0000077!2.92e-10!19;CL:0000181!9.87e-09!12;CL:0000417!9.87e-09!12;CL:0000668!9.87e-09!12;CL:0000414!9.87e-09!12;CL:0000412!9.87e-09!12;CL:0000182!9.87e-09!12;CL:0002150!2.94e-07!3;CL:0000861!2.94e-07!3;CL:0000349!8.72e-07!3;CL:0002577!8.72e-07!3;CL:0002334!9.02e-07!12 | |ontology_enrichment_celltype=CL:0000066!5.33e-11!254;CL:0000077!2.92e-10!19;CL:0000181!9.87e-09!12;CL:0000417!9.87e-09!12;CL:0000668!9.87e-09!12;CL:0000414!9.87e-09!12;CL:0000412!9.87e-09!12;CL:0000182!9.87e-09!12;CL:0002150!2.94e-07!3;CL:0000861!2.94e-07!3;CL:0000349!8.72e-07!3;CL:0002577!8.72e-07!3;CL:0002334!9.02e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002577;7.40e-13;3!CL:0000077;2.89e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.97e-13,253;CL:0002577,8.05e-13,3;CL:0000077,3.42e-10,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.08e-13;29 | |||
|ontology_enrichment_disease=DOID:305!2.30e-16!106;DOID:162!6.23e-12!235;DOID:14566!2.25e-11!239;DOID:0050687!8.96e-11!143 | |ontology_enrichment_disease=DOID:305!2.30e-16!106;DOID:162!6.23e-12!235;DOID:14566!2.25e-11!239;DOID:0050687!8.96e-11!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.03e-11,106;DOID:162,1.21e-08,235;DOID:14566,2.50e-08,239;DOID:0050687,1.65e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.19e-19!9;UBERON:0000077!5.58e-17!130;UBERON:0004119!1.29e-16!169;UBERON:0000925!1.29e-16!169;UBERON:0006595!1.29e-16!169;UBERON:0004921!5.84e-16!129;UBERON:0004185!5.84e-16!129;UBERON:0001007!1.33e-14!155;UBERON:0001555!1.33e-14!155;UBERON:0007026!1.33e-14!155;UBERON:0003124!1.90e-12!7;UBERON:0001041!4.75e-12!98;UBERON:0009497!1.23e-11!25;UBERON:0000015!1.23e-11!25;UBERON:0002423!1.23e-11!25;UBERON:0006235!1.23e-11!25;UBERON:0004161!1.23e-11!25;UBERON:0009856!5.39e-11!26;UBERON:0009854!5.99e-11!23;UBERON:0007499!6.77e-10!25;UBERON:0008835!8.28e-10!22;UBERON:0003894!8.28e-10!22;UBERON:0005631!4.27e-09!14;UBERON:0000158!4.27e-09!14;UBERON:0005911!5.14e-09!82;UBERON:0002417!6.10e-09!61;UBERON:0000916!6.10e-09!61;UBERON:0000466!9.88e-09!126;UBERON:0003929!1.11e-08!54;UBERON:0008947!2.40e-08!38;UBERON:0003258!2.40e-08!38;UBERON:0002107!5.18e-08!19;UBERON:0006925!5.18e-08!19;UBERON:0008836!5.18e-08!19;UBERON:0001557!5.87e-08!19;UBERON:0001987!6.60e-08!4;UBERON:0004340!6.60e-08!4;UBERON:0003688!1.63e-07!6;UBERON:0002358!1.63e-07!6;UBERON:0003684!1.63e-07!6;UBERON:0001178!1.63e-07!6;UBERON:0009569!3.70e-07!113;UBERON:0002368!3.90e-07!35;UBERON:0001048!4.20e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.93e-40;9!UBERON:0001557;4.93e-40;9!UBERON:0000072;4.33e-11;37!UBERON:0001987;9.15e-10;4!UBERON:0000065;5.97e-09;44!UBERON:0002423;2.81e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.95e-40,9;UBERON:0001557,4.86e-18,19;UBERON:0004921,1.49e-13,118;UBERON:0004119,7.39e-13,160;UBERON:0000925,7.39e-13,160;UBERON:0006595,7.39e-13,160;UBERON:0008947,6.00e-12,38;UBERON:0003258,6.00e-12,38;UBERON:0001007,3.79e-11,145;UBERON:0001555,3.79e-11,145;UBERON:0007026,3.79e-11,145;UBERON:0001041,1.69e-10,87;UBERON:0001987,9.74e-10,4;UBERON:0004340,9.74e-10,4;UBERON:0003124,1.63e-09,7;UBERON:0000072,3.18e-09,47;UBERON:0000065,9.66e-08,54;UBERON:0009497,2.58e-07,25;UBERON:0000015,2.58e-07,25;UBERON:0002423,2.58e-07,25;UBERON:0006235,2.58e-07,25;UBERON:0004161,2.58e-07,25;UBERON:0007499,2.67e-07,25;UBERON:0009856,5.53e-07,26 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,1.22866968250754,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.9305344242251,65.4108597503035,69.8931986662098,68.2719691213519,67.9783865568307,70.2321032568846,79.4156405063368,73.7792708871301,81.1816501156884,0,0,0,0,12.6755034821831,1.96565443335525,4.13552934676983,0,4.18160691046586,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.21251028578504,1.66435439510497,3.0239029332968,0.496215615637554,0.920771839728375,0.280660094433074,1.92208723883551,0.511707249066704,0.965123526861645,2.96836132889982,0,0,0,0,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11709188898084,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,11.5930172980052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86312320169638,0,0.0769502585037971,0.341826167541004,0,0.0897576444097721,0,1.91400695839152,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,0,3.98059040265026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.52418000472609,0,10.256171116643,13.8138809292891,10.5107785028108,0,0,0,0,0,0,0,1.36269994427607,0.85381197895741,0.599428828746391,0.144090417154106,0,0,0,0,0,1.35904206073614,0.836822770498666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.494495150286999,0.674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,1.32506888912221,0,0,0.171086837884329,0,0.854299300541557,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.363697318405119,0,0.928067519756987,1.19428766609585,0,0,0,0,0.192619830407303,16.5120025358693,0,26.0711814339113,0,16.3973592019333,13.0734853989486,0.308801447160972,17.1041558671392,0,1.15748422962549,0.337884881306145,0,0.690860683462397,1.21543982470953,0,0,0,0,0,3.68659363130579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0.327543835020193,0.443568258651136,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,2.24217730651031,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,2.31644057466312,0,0,0,0,0,0,0,0,0,0,1.15761237161917,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0.640364075266293,0,0.808426818959282,0,0,0,0,0,0 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|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,1.22866968250754,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.9305344242251,65.4108597503035,69.8931986662098,68.2719691213519,67.9783865568307,70.2321032568846,79.4156405063368,73.7792708871301,81.1816501156884,0,0,0,0,12.6755034821831,1.96565443335525,4.13552934676983,0,4.18160691046586,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.21251028578504,1.66435439510497,3.0239029332968,0.496215615637554,0.920771839728375,0.280660094433074,1.92208723883551,0.511707249066704,0.965123526861645,2.96836132889982,0,0,0,0,0,1.57117284469109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11709188898084,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,11.5930172980052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86312320169638,0,0.0769502585037971,0.341826167541004,0,0.0897576444097721,0,1.91400695839152,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,0,3.98059040265026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0.52418000472609,0,10.256171116643,13.8138809292891,10.5107785028108,0,0,0,0,0,0,0,1.36269994427607,0.85381197895741,0.599428828746391,0.144090417154106,0,0,0,0,0,1.35904206073614,0.836822770498666,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.494495150286999,0.674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,1.32506888912221,0,0,0.171086837884329,0,0.854299300541557,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.363697318405119,0,0.928067519756987,1.19428766609585,0,0,0,0,0.192619830407303,16.5120025358693,0,26.0711814339113,0,16.3973592019333,13.0734853989486,0.308801447160972,17.1041558671392,0,1.15748422962549,0.337884881306145,0,0.690860683462397,1.21543982470953,0,0,0,0,0,3.68659363130579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0.327543835020193,0.443568258651136,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,2.24217730651031,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,2.31644057466312,0,0,0,0,0,0,0,0,0,0,1.15761237161917,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0.143444410785353,0,0.0814032686109745,0.640364075266293,0,0.808426818959282,0,0,0,0,0,0 | ||
|short_description=p2@C4BPB | |short_description=p2@C4BPB | ||
}} | }} |
Latest revision as of 07:09, 20 September 2015
Short description: | p2@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C4BPB_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000492730_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.97e-13 | 253 |
placental epithelial cell | 8.05e-13 | 3 |
mesothelial cell | 3.42e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.95e-40 | 9 |
upper respiratory tract | 4.86e-18 | 19 |
subdivision of digestive tract | 1.49e-13 | 118 |
endoderm-derived structure | 7.39e-13 | 160 |
endoderm | 7.39e-13 | 160 |
presumptive endoderm | 7.39e-13 | 160 |
respiratory primordium | 6.00e-12 | 38 |
endoderm of foregut | 6.00e-12 | 38 |
digestive system | 3.79e-11 | 145 |
digestive tract | 3.79e-11 | 145 |
primitive gut | 3.79e-11 | 145 |
foregut | 1.69e-10 | 87 |
placenta | 9.74e-10 | 4 |
allantois | 9.74e-10 | 4 |
chorion | 1.63e-09 | 7 |
segment of respiratory tract | 3.18e-09 | 47 |
respiratory tract | 9.66e-08 | 54 |
epithelium of foregut-midgut junction | 2.58e-07 | 25 |
anatomical boundary | 2.58e-07 | 25 |
hepatobiliary system | 2.58e-07 | 25 |
foregut-midgut junction | 2.58e-07 | 25 |
septum transversum | 2.58e-07 | 25 |
epithelial sac | 2.67e-07 | 25 |
sac | 5.53e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.03e-11 | 106 |
cancer | 1.21e-08 | 235 |
disease of cellular proliferation | 2.50e-08 | 239 |
cell type cancer | 1.65e-07 | 143 |