FFCP PHASE1:Hg19::chr19:5846627..5846646,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2525 | |EntrezGene=2525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4014 | |HGNC=4014 | ||
|TSSclassifier=strong | |||
|UniProt=P21217 | |UniProt=P21217 | ||
|association_with_transcript=-75bp_to_AF131913_5end | |association_with_transcript=-75bp_to_AF131913_5end | ||
|cluster_id=chr19:5846627..5846646,- | |||
|coexpression_cluster_id=C164 | |coexpression_cluster_id=C164 | ||
|description=CAGE_peak_4_at_FUT3_5end | |description=CAGE_peak_4_at_FUT3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002178!9.00e-14!3 | |ontology_enrichment_celltype=CL:0002178!9.00e-14!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.73e-11;3 | |ontology_enrichment_celltype_v019=CL:0002178;6.73e-11;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,6.73e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.73e-29;1 | |ontology_enrichment_development_v019=UBERON:0001045;2.73e-29;1 | ||
|ontology_enrichment_disease=DOID:3493!7.70e-21!2;DOID:1799!9.97e-11!1;DOID:10165!9.97e-11!1;DOID:1798!9.97e-11!1 | |ontology_enrichment_disease=DOID:3493!7.70e-21!2;DOID:1799!9.97e-11!1;DOID:10165!9.97e-11!1;DOID:1798!9.97e-11!1 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.13e-57;2 | |ontology_enrichment_disease_v019=DOID:3493;1.13e-57;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.13e-57,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!3.85e-16!35;UBERON:0000059!2.50e-14!11;UBERON:0000160!5.28e-12!27;UBERON:0001154!4.58e-11!1;UBERON:0001153!4.58e-11!1;UBERON:0001155!2.61e-10!9;UBERON:0004907!1.18e-08!5;UBERON:0004921!3.42e-07!129;UBERON:0004185!3.42e-07!129 | |ontology_enrichment_uberon=UBERON:0005409!3.85e-16!35;UBERON:0000059!2.50e-14!11;UBERON:0000160!5.28e-12!27;UBERON:0001154!4.58e-11!1;UBERON:0001153!4.58e-11!1;UBERON:0001155!2.61e-10!9;UBERON:0004907!1.18e-08!5;UBERON:0004921!3.42e-07!129;UBERON:0004185!3.42e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;2.73e-29;1!UBERON:0001153;2.73e-29;1!UBERON:0009854;2.73e-29;1!UBERON:0005409;3.56e-20;22!UBERON:0000160;7.89e-15;17!UBERON:0001155;1.69e-13;9!UBERON:0004921;4.72e-13;33!UBERON:0000059;3.13e-11;11!UBERON:0009856;2.35e-08;4!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5!UBERON:0002108;5.38e-07;4!UBERON:0004907;6.21e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001154;2.73e-29;1!UBERON:0001153;2.73e-29;1!UBERON:0009854;2.73e-29;1!UBERON:0005409;3.56e-20;22!UBERON:0000160;7.89e-15;17!UBERON:0001155;1.69e-13;9!UBERON:0004921;4.72e-13;33!UBERON:0000059;3.13e-11;11!UBERON:0009856;2.35e-08;4!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5!UBERON:0002108;5.38e-07;4!UBERON:0004907;6.21e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,4.20e-29,1;UBERON:0001153,4.20e-29,1;UBERON:0001045,4.20e-29,1;UBERON:0005409,6.44e-18,25;UBERON:0000160,7.89e-15,17;UBERON:0001155,1.69e-13,9;UBERON:0000059,3.14e-11,11;UBERON:0002108,5.38e-07,4;UBERON:0004907,6.77e-07,5 | |||
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|short_description=p4@FUT3 | |short_description=p4@FUT3 | ||
}} | }} |
Latest revision as of 06:39, 20 September 2015
Short description: | p4@FUT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FUT3_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | -75bp_to_AF131913_5end |
EntrezGene: | FUT3 |
HGNC: | 4014 |
UniProt: | P21217 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 4.20e-29 | 1 |
caecum | 4.20e-29 | 1 |
midgut | 4.20e-29 | 1 |
gastrointestinal system | 6.44e-18 | 25 |
intestine | 7.89e-15 | 17 |
colon | 1.69e-13 | 9 |
large intestine | 3.14e-11 | 11 |
small intestine | 5.38e-07 | 4 |
lower digestive tract | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.13e-57 | 2 |