FFCP PHASE1:Hg19::chr1:207083104..207083127,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9214 | |EntrezGene=9214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14315 | |HGNC=14315 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=162bp_to_ENST00000474041_5end | |association_with_transcript=162bp_to_ENST00000474041_5end | ||
|cluster_id=chr1:207083104..207083127,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_7_at_FAIM3_5end | |description=CAGE_peak_7_at_FAIM3_5end | ||
|id=chr1:207083104..207083127,- | |id=chr1:207083104..207083127,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.13e-29;10!CL:0000147;6.01e-21;14!CL:0002567;5.59e-19;3!CL:0000710;2.15e-14;20!CL:0000075;2.02e-10;27!CL:0002077;2.23e-09;34!CL:0000346;1.14e-08;3!CL:1000428;1.14e-08;3!CL:0002566;1.16e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.49e-30,10;CL:0000541,8.49e-30,10;CL:0000147,4.90e-21,14;CL:0002567,3.67e-19,3;CL:0000710,1.87e-14,20;CL:0000333,2.30e-12,41;CL:0000075,1.82e-10,27;CL:0002077,2.07e-10,34;CL:0000346,1.02e-08,3;CL:1000428,1.02e-08,3;CL:0000133,3.43e-08,59;CL:0000221,8.21e-08,72;CL:0002566,1.12e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.74e-07;1!UBERON:0010226;1.74e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;6.30e-13;2!DOID:2394;7.06e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.15e-12,2;DOID:2394,6.43e-07,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.14e-08;3!UBERON:0001992;1.14e-08;3!UBERON:0002084;1.74e-07;1!UBERON:0002082;1.74e-07;1!UBERON:0001389;4.08e-07;1!UBERON:0000026;4.08e-07;1!UBERON:0008784;4.08e-07;1!UBERON:0006058;4.08e-07;1!UBERON:0003663;4.08e-07;1!UBERON:0004256;4.08e-07;1!UBERON:0004708;4.08e-07;1!UBERON:0002101;4.08e-07;1!UBERON:0004709;4.08e-07;1!UBERON:0002529;4.08e-07;1!UBERON:0010538;4.08e-07;1!UBERON:0003661;4.08e-07;1!UBERON:0010890;4.08e-07;1!UBERON:0002471;4.08e-07;1!UBERON:0001383;4.08e-07;1!UBERON:0010758;4.08e-07;1!UBERON:0010707;4.08e-07;1!UBERON:0000978;4.08e-07;1!UBERON:0002103;4.08e-07;1!UBERON:0001665;4.08e-07;1!UBERON:0003823;4.08e-07;1!UBERON:0000154;4.08e-07;1!UBERON:0010709;4.08e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.02e-08,3;UBERON:0001992,1.02e-08,3;UBERON:0002084,1.44e-07,1;UBERON:0002082,1.44e-07,1;UBERON:0010226,1.44e-07,1;UBERON:0005418,2.23e-07,1;UBERON:0001389,2.23e-07,1;UBERON:0000026,2.23e-07,1;UBERON:0008784,2.23e-07,1;UBERON:0006058,2.23e-07,1;UBERON:0003663,2.23e-07,1;UBERON:0004256,2.23e-07,1;UBERON:0004708,2.23e-07,1;UBERON:0002101,2.23e-07,1;UBERON:0004709,2.23e-07,1;UBERON:0002529,2.23e-07,1;UBERON:0010538,2.23e-07,1;UBERON:0003661,2.23e-07,1;UBERON:0010890,2.23e-07,1;UBERON:0002471,2.23e-07,1;UBERON:0001383,2.23e-07,1;UBERON:0004357,2.23e-07,1;UBERON:0004347,2.23e-07,1;UBERON:0005420,2.23e-07,1;UBERON:0005732,2.23e-07,1;UBERON:0010758,2.23e-07,1;UBERON:0010707,2.23e-07,1;UBERON:0000978,2.23e-07,1;UBERON:0002103,2.23e-07,1;UBERON:0001665,2.23e-07,1;UBERON:0003823,2.23e-07,1;UBERON:0000154,2.23e-07,1;UBERON:0010709,2.23e-07,1;UBERON:0005733,2.23e-07,1;UBERON:0005730,2.23e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918251677112708,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.616804496998528,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,2.01210257911091,0,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.261958150995425,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0,0.280901613404497,0,0.122834317311768,0.309977343527296,2.37600571456411,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0,0,0.211931901159562,0,0,0,0.558350568994769,0,0.0974370051611986,0,0.276149695926898,0,0,0,0.508681776931463,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,0,0,0.236613600079688,0.168584690078102,0.723033089650446,0.441175890929576,0.435758888184812,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,4.82583996620485,4.20187268114105,3.51652341630141,1.71072446022705,5.14137463516618,3.30377363628309,10.0039251420702,0,0,0.1466765716419,0,0,0.845302752556,1.06375246633948,0,0,1.41849132023278,0.799266537048298,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.322260734604821,0.145016693914229,0,0,0,0.576570202095319,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.235624804691373,0,0,0,0.975267478179181,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0.709522128141196,0,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.613612095012929,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.195984794828755,0.609414446062818,0.17472666824203,0,0,0.146178634172371,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0.400794101257669,0,0,0,0,0,0.288109595976299,0,0.235694034616795,0.407712618220842,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.998395002494955,1.28767814440971,0.89268582976749,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,0,0,0,0.394028536495991,0.209818352539992,0.105600336519406,0,0.575745591958336,0.714695326373367,2.64836788146173,0,0,0.864221491201268,0,0,0,0.170388021785422,0.566560457600628,0,0,0.387848869084652,0,0.171086837884329,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.124192805882767,0,0.124980407962107,1.06154382279153,2.28372266835974,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.318593534327405,1.34940933649081,0.776314784381297,0,0,2.60872530905867,0.300515217994437,0,0,1.27294061441792,0,1.39210127963548,0.398095888698616,0,0,0,0,0.192619830407303,0.428883182749851,0.521988583930423,0,0,0.489473409012935,0,0,0.877136198314828,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0.633936370075881,0.19998739585493,0,0,1.13503190713367,0,0,0,0,0,0,0,0.848662649770126,1.2754495206101,0.495743057036009,1.11728983594649,0,0,0,0,1.8374728641192,0,0,0,0.205116364240755,0.504143392443436,0,0,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0.655087670040387,0.147856086217045,0,0,0.206686796501184,0,0.546974809018219,0,0,0.175871244359621,0.127762427639595,0,0,0,0.455324382702595,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0.065772773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| ||
|short_description=p7@FAIM3 | |short_description=p7@FAIM3 | ||
}} | }} |
Latest revision as of 06:11, 20 September 2015
Short description: | p7@FAIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAIM3_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 162bp_to_ENST00000474041_5end |
EntrezGene: | FAIM3 |
HGNC: | 14315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.49e-30 | 10 |
melanoblast | 8.49e-30 | 10 |
pigment cell | 4.90e-21 | 14 |
light melanocyte | 3.67e-19 | 3 |
neurecto-epithelial cell | 1.87e-14 | 20 |
migratory neural crest cell | 2.30e-12 | 41 |
columnar/cuboidal epithelial cell | 1.82e-10 | 27 |
ecto-epithelial cell | 2.07e-10 | 34 |
hair follicle dermal papilla cell | 1.02e-08 | 3 |
stem cell of epidermis | 1.02e-08 | 3 |
neurectodermal cell | 3.43e-08 | 59 |
ectodermal cell | 8.21e-08 | 72 |
dark melanocyte | 1.12e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.02e-08 | 3 |
papillary layer of dermis | 1.02e-08 | 3 |
heart left ventricle | 1.44e-07 | 1 |
cardiac ventricle | 1.44e-07 | 1 |
future cardiac ventricle | 1.44e-07 | 1 |
hindlimb bud | 2.23e-07 | 1 |
soleus muscle | 2.23e-07 | 1 |
appendage | 2.23e-07 | 1 |
lower limb segment | 2.23e-07 | 1 |
multi-limb segment region | 2.23e-07 | 1 |
hindlimb muscle | 2.23e-07 | 1 |
hindlimb zeugopod muscle | 2.23e-07 | 1 |
paired limb/fin | 2.23e-07 | 1 |
limb | 2.23e-07 | 1 |
pelvic appendage | 2.23e-07 | 1 |
limb segment | 2.23e-07 | 1 |
paired limb/fin segment | 2.23e-07 | 1 |
limb muscle | 2.23e-07 | 1 |
pelvic complex muscle | 2.23e-07 | 1 |
zeugopod | 2.23e-07 | 1 |
muscle of leg | 2.23e-07 | 1 |
paired limb/fin bud | 2.23e-07 | 1 |
limb bud | 2.23e-07 | 1 |
pelvic appendage bud | 2.23e-07 | 1 |
limb/fin field | 2.23e-07 | 1 |
subdivision of organism along appendicular axis | 2.23e-07 | 1 |
appendage girdle complex | 2.23e-07 | 1 |
leg | 2.23e-07 | 1 |
hindlimb | 2.23e-07 | 1 |
triceps surae | 2.23e-07 | 1 |
hindlimb zeugopod | 2.23e-07 | 1 |
posterior region of body | 2.23e-07 | 1 |
pelvic complex | 2.23e-07 | 1 |
limb field | 2.23e-07 | 1 |
hindlimb/pelvic fin field | 2.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.15e-12 | 2 |
ovarian cancer | 6.43e-07 | 14 |