FFCP PHASE1:Hg19::chr17:39684550..39684567,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3880 | |EntrezGene=3880 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6436 | |HGNC=6436 | ||
|TSSclassifier=strong | |||
|UniProt=P08727,C9JM50 | |UniProt=P08727,C9JM50 | ||
|association_with_transcript=0bp_to_ENST00000361566,ENST00000455635_5end | |association_with_transcript=0bp_to_ENST00000361566,ENST00000455635_5end | ||
|cluster_id=chr17:39684550..39684567,- | |||
|coexpression_cluster_id=C2407 | |||
|description=CAGE_peak_1_at_KRT19_5end | |description=CAGE_peak_1_at_KRT19_5end | ||
|id=chr17:39684550..39684567,- | |id=chr17:39684550..39684567,- | ||
|ontology_enrichment_celltype=CL:0000066!2.76e-42!254;CL:0002076!1.45e-12!43;CL:0000223!1.71e-12!59;CL:0002321!9.24e-10!248;CL:0000220!1.48e-09!246;CL:0000076!2.05e-09!62;CL:0002368!2.53e-09!13;CL:1000497!1.09e-07!18;CL:0002518!1.09e-07!18;CL:0002202!5.95e-07!9;CL:0002632!5.95e-07!9;CL:1000449!7.61e-07!16 | |ontology_enrichment_celltype=CL:0000066!2.76e-42!254;CL:0002076!1.45e-12!43;CL:0000223!1.71e-12!59;CL:0002321!9.24e-10!248;CL:0000220!1.48e-09!246;CL:0000076!2.05e-09!62;CL:0002368!2.53e-09!13;CL:1000497!1.09e-07!18;CL:0002518!1.09e-07!18;CL:0002202!5.95e-07!9;CL:0002632!5.95e-07!9;CL:1000449!7.61e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.29e-10;42!CL:0002368;1.43e-09;13!CL:1000497;1.77e-08;17!CL:0002518;1.77e-08;17!CL:1000449;1.34e-07;15!CL:0000349;2.35e-07;19!CL:1000507;3.02e-07;10!CL:1000494;3.02e-07;10!CL:0002202;3.99e-07;9!CL:0002632;3.99e-07;9!CL:0000077;9.12e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.74e-43,253;CL:0002076,7.69e-13,42;CL:0000223,1.46e-12,58;CL:0000076,1.22e-09,63;CL:0002368,1.43e-09,13;CL:0002321,7.39e-09,250;CL:1000497,1.77e-08,17;CL:0002518,1.77e-08,17;CL:1000449,1.34e-07,15;CL:0000349,2.36e-07,19;CL:1000507,3.02e-07,10;CL:1000494,3.02e-07,10;CL:0002202,3.99e-07,9;CL:0002632,3.99e-07,9;CL:0000077,8.20e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;3.93e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.02e-18!106;DOID:0050687!1.46e-11!143;DOID:299!4.74e-07!25 | |ontology_enrichment_disease=DOID:305!1.02e-18!106;DOID:0050687!1.46e-11!143;DOID:299!4.74e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;2.29e-07;25!DOID:305;6.45e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.91e-19,106;DOID:0050687,4.95e-11,143;DOID:299,2.35e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.08e-24!169;UBERON:0000925!2.08e-24!169;UBERON:0006595!2.08e-24!169;UBERON:0001007!1.68e-18!155;UBERON:0001555!1.68e-18!155;UBERON:0007026!1.68e-18!155;UBERON:0000466!2.43e-18!126;UBERON:0000464!2.95e-17!104;UBERON:0000077!2.54e-16!130;UBERON:0003104!3.38e-16!238;UBERON:0009142!3.38e-16!238;UBERON:0000481!3.81e-16!347;UBERON:0004921!9.89e-16!129;UBERON:0004185!9.89e-16!129;UBERON:0002100!1.36e-14!216;UBERON:0005911!1.29e-13!82;UBERON:0009569!2.62e-13!113;UBERON:0005177!3.13e-13!107;UBERON:0000475!5.31e-12!365;UBERON:0001004!9.93e-12!72;UBERON:0000064!3.21e-11!219;UBERON:0000468!3.35e-11!659;UBERON:0001008!6.95e-11!45;UBERON:0006554!1.19e-10!44;UBERON:0003064!1.37e-10!37;UBERON:0000065!3.02e-10!53;UBERON:0005181!6.61e-10!35;UBERON:0005178!7.15e-10!34;UBERON:0002224!7.15e-10!34;UBERON:0000915!1.24e-09!52;UBERON:0001041!1.38e-09!98;UBERON:0005631!2.32e-09!14;UBERON:0000158!2.32e-09!14;UBERON:0001048!2.50e-09!168;UBERON:0000483!4.86e-09!309;UBERON:0002553!6.94e-09!70;UBERON:0000119!8.43e-09!312;UBERON:0005153!9.74e-09!37;UBERON:0003886!1.52e-08!63;UBERON:0000058!1.52e-08!26;UBERON:0005256!2.78e-08!143;UBERON:0005156!3.61e-08!59;UBERON:0000990!3.61e-08!59;UBERON:0008947!3.88e-08!38;UBERON:0003258!3.88e-08!38;UBERON:0000467!4.02e-08!625;UBERON:0000480!6.32e-08!626;UBERON:0005157!7.20e-08!51;UBERON:0000062!7.34e-08!511;UBERON:0004111!8.93e-08!241;UBERON:0000477!1.02e-07!286;UBERON:0000072!1.05e-07!46;UBERON:0000063!1.16e-07!97;UBERON:0000080!2.18e-07!18;UBERON:0002120!2.18e-07!18;UBERON:0004875!2.18e-07!18;UBERON:0005721!2.18e-07!18;UBERON:0005754!2.18e-07!18;UBERON:0007297!2.18e-07!18;UBERON:0007196!2.33e-07!14;UBERON:0001558!2.33e-07!14;UBERON:0004876!3.64e-07!20;UBERON:0006555!3.87e-07!17;UBERON:0005103!3.87e-07!17;UBERON:0000083!3.87e-07!17;UBERON:0009201!3.87e-07!17;UBERON:0004819!3.87e-07!17;UBERON:0006553!3.87e-07!17;UBERON:0003074!3.87e-07!17;UBERON:0003060!3.87e-07!17;UBERON:0002048!6.29e-07!22;UBERON:0000117!6.29e-07!22;UBERON:0000171!6.29e-07!22;UBERON:0000170!6.29e-07!22;UBERON:0005597!6.29e-07!22;UBERON:0000118!6.29e-07!22;UBERON:0004211!7.61e-07!16;UBERON:0001285!7.61e-07!16;UBERON:0007684!7.61e-07!16;UBERON:0003220!7.61e-07!16;UBERON:0004208!7.61e-07!16;UBERON:0000161!7.73e-07!35;UBERON:0000922!7.98e-07!612 | |ontology_enrichment_uberon=UBERON:0004119!2.08e-24!169;UBERON:0000925!2.08e-24!169;UBERON:0006595!2.08e-24!169;UBERON:0001007!1.68e-18!155;UBERON:0001555!1.68e-18!155;UBERON:0007026!1.68e-18!155;UBERON:0000466!2.43e-18!126;UBERON:0000464!2.95e-17!104;UBERON:0000077!2.54e-16!130;UBERON:0003104!3.38e-16!238;UBERON:0009142!3.38e-16!238;UBERON:0000481!3.81e-16!347;UBERON:0004921!9.89e-16!129;UBERON:0004185!9.89e-16!129;UBERON:0002100!1.36e-14!216;UBERON:0005911!1.29e-13!82;UBERON:0009569!2.62e-13!113;UBERON:0005177!3.13e-13!107;UBERON:0000475!5.31e-12!365;UBERON:0001004!9.93e-12!72;UBERON:0000064!3.21e-11!219;UBERON:0000468!3.35e-11!659;UBERON:0001008!6.95e-11!45;UBERON:0006554!1.19e-10!44;UBERON:0003064!1.37e-10!37;UBERON:0000065!3.02e-10!53;UBERON:0005181!6.61e-10!35;UBERON:0005178!7.15e-10!34;UBERON:0002224!7.15e-10!34;UBERON:0000915!1.24e-09!52;UBERON:0001041!1.38e-09!98;UBERON:0005631!2.32e-09!14;UBERON:0000158!2.32e-09!14;UBERON:0001048!2.50e-09!168;UBERON:0000483!4.86e-09!309;UBERON:0002553!6.94e-09!70;UBERON:0000119!8.43e-09!312;UBERON:0005153!9.74e-09!37;UBERON:0003886!1.52e-08!63;UBERON:0000058!1.52e-08!26;UBERON:0005256!2.78e-08!143;UBERON:0005156!3.61e-08!59;UBERON:0000990!3.61e-08!59;UBERON:0008947!3.88e-08!38;UBERON:0003258!3.88e-08!38;UBERON:0000467!4.02e-08!625;UBERON:0000480!6.32e-08!626;UBERON:0005157!7.20e-08!51;UBERON:0000062!7.34e-08!511;UBERON:0004111!8.93e-08!241;UBERON:0000477!1.02e-07!286;UBERON:0000072!1.05e-07!46;UBERON:0000063!1.16e-07!97;UBERON:0000080!2.18e-07!18;UBERON:0002120!2.18e-07!18;UBERON:0004875!2.18e-07!18;UBERON:0005721!2.18e-07!18;UBERON:0005754!2.18e-07!18;UBERON:0007297!2.18e-07!18;UBERON:0007196!2.33e-07!14;UBERON:0001558!2.33e-07!14;UBERON:0004876!3.64e-07!20;UBERON:0006555!3.87e-07!17;UBERON:0005103!3.87e-07!17;UBERON:0000083!3.87e-07!17;UBERON:0009201!3.87e-07!17;UBERON:0004819!3.87e-07!17;UBERON:0006553!3.87e-07!17;UBERON:0003074!3.87e-07!17;UBERON:0003060!3.87e-07!17;UBERON:0002048!6.29e-07!22;UBERON:0000117!6.29e-07!22;UBERON:0000171!6.29e-07!22;UBERON:0000170!6.29e-07!22;UBERON:0005597!6.29e-07!22;UBERON:0000118!6.29e-07!22;UBERON:0004211!7.61e-07!16;UBERON:0001285!7.61e-07!16;UBERON:0007684!7.61e-07!16;UBERON:0003220!7.61e-07!16;UBERON:0004208!7.61e-07!16;UBERON:0000161!7.73e-07!35;UBERON:0000922!7.98e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0005178;1.99e-08;34!UBERON:0002224;1.99e-08;34!UBERON:0005911;3.63e-08;36!UBERON:0005181;7.03e-08;35!UBERON:0006554;7.72e-08;30!UBERON:0001008;7.72e-08;30!UBERON:0006555;1.34e-07;15!UBERON:0004819;1.34e-07;15!UBERON:0001285;1.34e-07;15!UBERON:0007684;1.34e-07;15!UBERON:0004807;2.53e-07;22!UBERON:0004211;3.02e-07;10!UBERON:0009773;3.02e-07;10!UBERON:0001231;3.02e-07;10!UBERON:0004810;3.02e-07;10!UBERON:0005631;3.63e-07;10!UBERON:0000158;3.63e-07;10!UBERON:0000065;9.55e-07;44 | |||
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| ||
|short_description=p1@KRT19 | |short_description=p1@KRT19 | ||
}} | }} |
Latest revision as of 06:01, 20 September 2015
Short description: | p1@KRT19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT19_5end |
Coexpression cluster: | C2407_Alveolar_Tracheal_Small_Bronchial_MCF7_Amniotic_Renal |
Association with transcript: | 0bp_to_ENST00000361566, ENST00000455635_5end |
EntrezGene: | KRT19 |
HGNC: | 6436 |
UniProt: | P08727C9JM50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.74e-43 | 253 |
endo-epithelial cell | 7.69e-13 | 42 |
endodermal cell | 1.46e-12 | 58 |
squamous epithelial cell | 1.22e-09 | 63 |
respiratory epithelial cell | 1.43e-09 | 13 |
embryonic cell | 7.39e-09 | 250 |
kidney cell | 1.77e-08 | 17 |
kidney epithelial cell | 1.77e-08 | 17 |
epithelial cell of nephron | 1.34e-07 | 15 |
extraembryonic cell | 2.36e-07 | 19 |
kidney tubule cell | 3.02e-07 | 10 |
nephron tubule epithelial cell | 3.02e-07 | 10 |
epithelial cell of tracheobronchial tree | 3.99e-07 | 9 |
epithelial cell of lower respiratory tract | 3.99e-07 | 9 |
mesothelial cell | 8.20e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.91e-19 | 106 |
cell type cancer | 4.95e-11 | 143 |
adenocarcinoma | 2.35e-07 | 25 |