FFCP PHASE1:Hg19::chr7:960507..960519,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:960507..960519,-
|short_description=p9@ADAP1
|description=CAGE_peak_9_at_ADAP1_5end
|association_with_transcript=0bp_to_ENST00000538188,uc011jvs.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11033 | |EntrezGene=11033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16486 | |HGNC=16486 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7V4 | |UniProt=F5H7V4 | ||
|association_with_transcript=0bp_to_ENST00000538188,uc011jvs.1_5end | |||
|cluster_id=chr7:960507..960519,- | |||
|coexpression_cluster_id=C1052 | |||
|description=CAGE_peak_9_at_ADAP1_5end | |||
|id=chr7:960507..960519,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.01e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.01e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.11e-25;1 | |||
|ontology_enrichment_disease=DOID:3493!1.59e-18!2;DOID:3111!4.87e-10!1;DOID:3603!4.87e-10!1;DOID:299!1.57e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;8.82e-51;2!DOID:3111;4.06e-26;1!DOID:3603;4.06e-26;1!DOID:299;4.62e-25;25!DOID:4929;1.07e-13;2!DOID:3119;4.19e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.82e-51,2;DOID:3111,4.61e-26,1;DOID:3603,4.61e-26,1;DOID:299,4.73e-25,25;DOID:4929,1.07e-13,2;DOID:3119,4.19e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0009663!5.25e-19!7;UBERON:0002308!7.69e-15!9;UBERON:0002420!7.69e-15!9;UBERON:0000125!7.69e-15!9;UBERON:0007245!7.69e-15!9;UBERON:0010009!7.69e-15!9;UBERON:0010011!7.69e-15!9;UBERON:0000454!7.69e-15!9;UBERON:0007023!1.25e-11!115;UBERON:0002294!1.68e-11!7;UBERON:0001173!1.68e-11!7;UBERON:0004912!1.68e-11!7;UBERON:0004913!5.31e-10!1;UBERON:0003703!5.31e-10!1;UBERON:0001174!5.31e-10!1;UBERON:0004914!5.31e-10!1;UBERON:0001154!7.50e-10!1;UBERON:0001153!7.50e-10!1;UBERON:0002038!9.70e-10!1;UBERON:0009661!9.70e-10!1;UBERON:0002394!2.08e-09!4;UBERON:0003928!2.08e-09!4;UBERON:0002336!2.46e-09!1;UBERON:0001018!2.46e-09!1;UBERON:0002473!2.46e-09!1;UBERON:0005340!2.46e-09!1;UBERON:0002316!2.46e-09!1;UBERON:0003544!2.46e-09!1;UBERON:0001020!2.46e-09!1;UBERON:0005970!2.46e-09!1;UBERON:0002437!2.46e-09!1;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1;UBERON:0001155!4.08e-09!9;UBERON:0000369!4.40e-09!4;UBERON:0002435!4.40e-09!4;UBERON:0000204!4.40e-09!4;UBERON:0010082!4.40e-09!4;UBERON:0002791!3.10e-08!33;UBERON:0005409!4.84e-08!35;UBERON:0001893!5.49e-08!34;UBERON:0000059!1.53e-07!11;UBERON:0000160!2.10e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;5.93e-26;1!UBERON:0003703;5.93e-26;1!UBERON:0001174;5.93e-26;1!UBERON:0004914;5.93e-26;1!UBERON:0005795;1.11e-25;1!UBERON:0002294;4.86e-15;7!UBERON:0001173;4.86e-15;7!UBERON:0005409;1.89e-10;22!UBERON:0002114;1.41e-09;2!UBERON:0002110;1.74e-09;3!UBERON:0002394;1.69e-07;4!UBERON:0003928;1.69e-07;4!UBERON:0004921;2.27e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,5.93e-26,1;UBERON:0003703,5.93e-26,1;UBERON:0001174,5.93e-26,1;UBERON:0004914,5.93e-26,1;UBERON:0002294,6.16e-12,9;UBERON:0001173,6.16e-12,9;UBERON:0004912,6.16e-12,9;UBERON:0002114,1.41e-09,2;UBERON:0002110,1.67e-09,3;UBERON:0006242,1.67e-09,3;UBERON:0005409,2.52e-09,25 | |||
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|short_description=p9@ADAP1 | |||
}} | }} |
Latest revision as of 05:41, 20 September 2015
Short description: | p9@ADAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ADAP1_5end |
Coexpression cluster: | C1052_signet_colon_mucinous_papillotubular_adenocarcinoma_gall_thyroid |
Association with transcript: | 0bp_to_ENST00000538188, uc011jvs.1_5end |
EntrezGene: | ADAP1 |
HGNC: | 16486 |
UniProt: | F5H7V4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.01e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 5.93e-26 | 1 |
extrahepatic bile duct | 5.93e-26 | 1 |
common bile duct | 5.93e-26 | 1 |
duodenal papilla | 5.93e-26 | 1 |
biliary system | 6.16e-12 | 9 |
biliary tree | 6.16e-12 | 9 |
biliary bud | 6.16e-12 | 9 |
duodenum | 1.41e-09 | 2 |
gallbladder | 1.67e-09 | 3 |
gall bladder primordium | 1.67e-09 | 3 |
gastrointestinal system | 2.52e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.82e-51 | 2 |
cystadenocarcinoma | 4.61e-26 | 1 |
mucinous cystadenocarcinoma | 4.61e-26 | 1 |
adenocarcinoma | 4.73e-25 | 25 |
tubular adenocarcinoma | 1.07e-13 | 2 |
gastrointestinal system cancer | 4.19e-08 | 14 |