FFCP PHASE1:Hg19::chr10:98064150..98064163,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1791 | |EntrezGene=1791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2983 | |HGNC=2983 | ||
|TSSclassifier=strong | |||
|UniProt=P04053 | |UniProt=P04053 | ||
|association_with_transcript=0bp_to_ENST00000371174_5end | |association_with_transcript=0bp_to_ENST00000371174_5end | ||
|cluster_id=chr10:98064150..98064163,+ | |||
|coexpression_cluster_id=C1604 | |||
|description=CAGE_peak_3_at_DNTT_5end | |description=CAGE_peak_3_at_DNTT_5end | ||
|id=chr10:98064150..98064163,+ | |id=chr10:98064150..98064163,+ | ||
|ontology_enrichment_celltype=CL:0000817!1.46e-26!3;CL:0000785!6.35e-18!2;CL:0000955!6.35e-18!2;CL:0000818!6.35e-18!2;CL:0000954!6.35e-18!2;CL:0000816!6.35e-18!2;CL:0001024!2.16e-10!1;CL:0000236!4.22e-10!14;CL:0000819!6.91e-10!1;CL:0000946!8.99e-10!1;CL:0000786!8.99e-10!1;CL:0000980!8.99e-10!1 | |ontology_enrichment_celltype=CL:0000817!1.46e-26!3;CL:0000785!6.35e-18!2;CL:0000955!6.35e-18!2;CL:0000818!6.35e-18!2;CL:0000954!6.35e-18!2;CL:0000816!6.35e-18!2;CL:0001024!2.16e-10!1;CL:0000236!4.22e-10!14;CL:0000819!6.91e-10!1;CL:0000946!8.99e-10!1;CL:0000786!8.99e-10!1;CL:0000980!8.99e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000817;3.75e-18;1!CL:0000037;4.44e-18;1!CL:0001024;4.44e-18;1!CL:0002032;1.03e-17;1!CL:0000557;1.03e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,4.44e-18,1;CL:0000817,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.94e-09;2 | |||
|ontology_enrichment_disease=DOID:0060073!6.91e-10!1;DOID:8675!6.91e-10!1 | |ontology_enrichment_disease=DOID:0060073!6.91e-10!1;DOID:8675!6.91e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.76e-12!7;UBERON:0002370!5.31e-10!4;UBERON:0005058!5.31e-10!4;UBERON:0009113!5.31e-10!4;UBERON:0003295!5.31e-10!4;UBERON:0005562!5.31e-10!4;UBERON:0001736!5.79e-10!1;UBERON:0006298!5.79e-10!1;UBERON:0003408!1.44e-08!10;UBERON:0003351!6.09e-07!6 | |ontology_enrichment_uberon=UBERON:0004177!6.76e-12!7;UBERON:0002370!5.31e-10!4;UBERON:0005058!5.31e-10!4;UBERON:0009113!5.31e-10!4;UBERON:0003295!5.31e-10!4;UBERON:0005562!5.31e-10!4;UBERON:0001736!5.79e-10!1;UBERON:0006298!5.79e-10!1;UBERON:0003408!1.44e-08!10;UBERON:0003351!6.09e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.59e-34;2!UBERON:0005058;2.59e-34;2!UBERON:0009113;2.59e-34;2!UBERON:0004177;2.25e-14;5!UBERON:0005057;2.25e-14;5!UBERON:0002405;3.40e-10;27!UBERON:0002390;1.72e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.51e-18,4;UBERON:0005058,9.51e-18,4;UBERON:0009113,9.51e-18,4;UBERON:0003295,9.51e-18,4;UBERON:0005562,9.51e-18,4;UBERON:0003351,3.64e-12,6;UBERON:0004177,1.46e-10,7;UBERON:0005057,1.46e-10,7;UBERON:0000974,1.16e-07,10;UBERON:0003408,1.16e-07,10;UBERON:0001042,1.16e-07,10;UBERON:0009145,1.16e-07,10;UBERON:0006562,4.85e-07,11;UBERON:0009722,4.85e-07,11;UBERON:0007690,4.85e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.322425920756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,3.96513985737078,0.560508562981536,30.0257856643588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50487269004906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6799199098072,3.69937585411753,0.478278818186467,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57072752012032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,26.3522752130905,7.57311514409466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81146414231924,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.322425920756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,3.96513985737078,0.560508562981536,30.0257856643588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.50487269004906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6799199098072,3.69937585411753,0.478278818186467,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57072752012032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,26.3522752130905,7.57311514409466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81146414231924,0 | ||
|short_description=p3@DNTT | |short_description=p3@DNTT | ||
}} | }} |
Latest revision as of 04:48, 20 September 2015
Short description: | p3@DNTT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DNTT_5end |
Coexpression cluster: | C1604_thymus_acute_CD34_CD133_Hodgkin_non_vein |
Association with transcript: | 0bp_to_ENST00000371174_5end |
EntrezGene: | DNTT |
HGNC: | 2983 |
UniProt: | P04053 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 4.44e-18 | 1 |
precursor B cell | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 9.51e-18 | 4 |
hemolymphoid system gland | 9.51e-18 | 4 |
thymic region | 9.51e-18 | 4 |
pharyngeal gland | 9.51e-18 | 4 |
thymus primordium | 9.51e-18 | 4 |
pharyngeal epithelium | 3.64e-12 | 6 |
hemopoietic organ | 1.46e-10 | 7 |
immune organ | 1.46e-10 | 7 |
neck | 1.16e-07 | 10 |
gland of gut | 1.16e-07 | 10 |
chordate pharynx | 1.16e-07 | 10 |
pharyngeal region of foregut | 1.16e-07 | 10 |
pharynx | 4.85e-07 | 11 |
entire pharyngeal arch endoderm | 4.85e-07 | 11 |
early pharyngeal endoderm | 4.85e-07 | 11 |