FFCP PHASE1:Hg19::chr19:571277..571325,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=682 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1116 | |||
|TSSclassifier=strong | |||
|UniProt=A6NJW1,D3YLG5,P35613,Q54A51 | |||
|association_with_transcript=0bp_to_ENST00000346916,ENST00000545507,NM_198591,uc002loy.2_5end | |||
|cluster_id=chr19:571277..571325,+ | |||
|description=CAGE_peak_3_at_BSG_5end | |||
|id=chr19:571277..571325,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.67e-07!254;CL:0002319!8.49e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.84e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.02e-09;29!UBERON:0001041;1.59e-08;30 | |||
|ontology_enrichment_disease=DOID:162!1.60e-22!235;DOID:14566!4.66e-22!239;DOID:0050687!9.16e-17!143;DOID:305!9.83e-17!106;DOID:0050686!6.37e-15!137;DOID:2531!1.64e-11!51;DOID:0060083!1.64e-11!51;DOID:1240!1.38e-09!39;DOID:8692!1.97e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.48e-12;31!DOID:1240;1.22e-11;39!DOID:305;1.14e-10;106!DOID:2531;1.44e-10;51!DOID:0060083;1.44e-10;51!DOID:299;3.73e-07;25!DOID:7;5.13e-07;39!DOID:0050687;6.76e-07;143!DOID:5093;9.31e-07;4!DOID:1612;9.31e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.21e-41,235;DOID:14566,1.71e-40,239;DOID:0050687,9.41e-29,143;DOID:305,9.46e-28,106;DOID:0050686,1.68e-21,137;DOID:2531,1.73e-16,51;DOID:0060083,1.73e-16,51;DOID:1240,8.51e-15,39;DOID:8692,1.40e-12,31;DOID:7,1.40e-07,39;DOID:299,3.92e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.32e-08!129;UBERON:0004185!1.32e-08!129;UBERON:0000077!1.78e-08!130;UBERON:0001041!2.41e-07!98;UBERON:0001007!6.03e-07!155;UBERON:0001555!6.03e-07!155;UBERON:0007026!6.03e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.66e-09;9!UBERON:0001557;1.66e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.82e-10,9;UBERON:0001041,2.11e-07,87;UBERON:0004921,2.37e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,1.23121058076788,0.612002073732759,0.313454721478088,1.14494394852423,1.77936752594749,1.63205431473244,1.14620108621927,1.47781061009902,1.8890587515283,0,0.383829398097213,0.309632246632152,0,0.30120591877825,0,2.78881922089086,1.56386155736164,0.293600439334847,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0.970336244751265,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0.918251677112708,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.673971786878971,0.300353785683013,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0,0,0,1.58030450865046,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0.589211814949674,0,0,0.128091319725675,0.260118695119756,0.986627427622057,0.276350017785848,0.579606171470105,0.14828656316206,0.535081656179426,0,0.339928028092699,0,0.34362744548263,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0.144846518960824,0,0,1.22895262313288,0.665188192387692,0.790513071238134,0.130979075497713,0.364295288292542,0.741568885568859,0,0,0.26591592103773,0.238490624305342,1.14398982156026,0.371457501329565,0.198762407366705,0.860234595106124,0,0.56530794192401,1.25849830862972,0.550236083880135,0.417989933073621,0.258416759169329,0.71153252537342,0.33472061276467,0,0.760272105718513,0.488124115096339,0,0,0.892997282840798,0.673588117878509,1.0135033243499,3.06633274931766,0.949265659568129,1.09921046358244,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0.937285727335186,0,0,0,0.587172493218824,0.647491777472526,0.842704840213491,0.204154171254893,0,0.103325781175765,0,0.741800787835671,0,0,0.505008341862199,0.125118519871964,0,0,0.612975591598039,0.300476117813194,0.340296549480063,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.403008392910561,0.508681776931463,0,0,0,0.121973706129595,0.397589304964456,0.232387885739037,0.829288440122964,1.00928340350251,0,0,0,0,0,0,2.60274960087657,2.36018566109342,1.68707720918437,2.86764329104224,3.4860711054785,1.89816495288877,1.21348177344148,2.15843611637881,1.92373578473195,0.738155454624648,0,0.8231480226628,0,1.26755034821831,4.91413608338813,0.590789906681404,9.71218818712231,2.45976877086227,0.343135620597051,0.109750285408626,0,0.100528972411631,0.277765335475589,0.325808305310325,0,0,0.927443239800615,0,0.721832238805369,0.925971025153221,0.761016608938393,8.69224837755203,8.58486162094873,0,0.468008530278475,1.0404181360211,0.93733833986777,0,0.283550194484773,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.901029173531752,0,0.560655421726804,0,0.2933531432838,0,0,0.845302752556,0,0,0.771622122786426,0,0,0,0,0.823240336780769,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0,0,0,0,0.205476322550383,0,2.35378802386407,0,0,0,1.52456774533478,2.60279707715243,1.54657762555539,0.502548796003046,1.91381625495949,0.749007023947182,0,1.24324654030811,0,0.500170521059677,0,0,0,0,0.117141414992713,0,0,0,0,0.368738337083406,0.260650843404249,0.391602314925481,0,0,0.431428401637234,0.213455115606889,0,0,0.604780586659361,0,0.153461973288062,0,0,0.511707249066704,0,0,0.154209693802656,0,0.328508624055237,0,0.232420756919918,5.07609688284813,0,0,1.26295892981067,0.728364672026868,0.524497659837696,0.902399225814824,0.385076685522074,0.784349769176855,1.46139224653261,0.422206515571503,0,0.170093705276516,0.647747748306418,0,1.08378575017541,1.00337954770971,1.01950509218015,1.66215201785745,0.447749509444357,4.60445740956463,2.87578996127391,0.512900250232778,0.328014645699706,0.325378394664303,0.618246069886334,2.28923662045859,2.14524699793529,0.574265537996172,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.949138274156178,0.190630193923825,0,0,0.636406495851874,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.682499557039929,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0.709522128141196,0,0,0,0.699869440489966,0.48111056362756,0.670302275535787,0,0.376575203107117,0,0,0,0,0.507447609232169,1.52927441428475,0,0.238231775457789,0,0.648473311192717,0,0.79312517629427,2.56377770705936,0,1.96032172784825,0.929015875628594,0,1.4939787103167,3.50737800003409,1.39705560002972,3.4470966623826,1.2700414963433,0.973865820823666,1.68478306868075,1.82587743226554,2.97691801968744,0,2.03150133361924,5.94175877883688,3.8341944366299,0,2.40453741329035,4.60861146462687,4.47352215784832,4.50492682622153,0.781552381608161,2.50565556505718,0,2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| |||
|short_description=p3@BSG | |||
}} |
Latest revision as of 04:34, 20 September 2015
Short description: | p3@BSG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BSG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000346916, ENST00000545507, NM_198591, uc002loy.2_5end |
EntrezGene: | BSG |
HGNC: | 1116 |
UniProt: | A6NJW1D3YLG5P35613Q54A51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.84e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.82e-10 | 9 |
foregut | 2.11e-07 | 87 |
subdivision of digestive tract | 2.37e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.21e-41 | 235 |
disease of cellular proliferation | 1.71e-40 | 239 |
cell type cancer | 9.41e-29 | 143 |
carcinoma | 9.46e-28 | 106 |
organ system cancer | 1.68e-21 | 137 |
hematologic cancer | 1.73e-16 | 51 |
immune system cancer | 1.73e-16 | 51 |
leukemia | 8.51e-15 | 39 |
myeloid leukemia | 1.40e-12 | 31 |
disease of anatomical entity | 1.40e-07 | 39 |
adenocarcinoma | 3.92e-07 | 25 |