FFCP PHASE1:Hg19::chr16:10276234..10276249,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:10276234..10276249,- to FFCP PHASE1:Hg19::chr16:10276234..10276249,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2903 | |EntrezGene=2903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4585 | |HGNC=4585 | ||
|TSSclassifier=strong | |||
|UniProt=Q12879,Q547U9,Q59EW6 | |UniProt=Q12879,Q547U9,Q59EW6 | ||
|association_with_transcript=13bp_to_ENST00000330684,NM_001134407,uc002czo.3,uc010buk.2_5end | |||
|cluster_id=chr16:10276234..10276249,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GRIN2A_5end | |||
|id=chr16:10276234..10276249,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.36e-15;82!UBERON:0003056;4.51e-08;3!UBERON:0006222;7.15e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;7.15e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,8.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!9.08e-57!86;UBERON:0001017!1.48e-55!82;UBERON:0001049!2.63e-54!57;UBERON:0005068!2.63e-54!57;UBERON:0006241!2.63e-54!57;UBERON:0007135!2.63e-54!57;UBERON:0000073!2.78e-54!94;UBERON:0001016!2.78e-54!94;UBERON:0007023!9.04e-47!115;UBERON:0002616!1.29e-44!59;UBERON:0002780!1.45e-44!41;UBERON:0001890!1.45e-44!41;UBERON:0006240!1.45e-44!41;UBERON:0000955!3.68e-44!69;UBERON:0006238!3.68e-44!69;UBERON:0003080!2.90e-43!42;UBERON:0003075!1.92e-40!86;UBERON:0007284!1.92e-40!86;UBERON:0001893!9.39e-40!34;UBERON:0001869!1.11e-39!32;UBERON:0002619!2.02e-39!22;UBERON:0002020!4.87e-39!34;UBERON:0003528!4.87e-39!34;UBERON:0002346!5.64e-38!90;UBERON:0002791!6.20e-38!33;UBERON:0001950!7.59e-36!20;UBERON:0000956!5.44e-34!25;UBERON:0000203!5.44e-34!25;UBERON:0003056!2.19e-30!61;UBERON:0000153!2.92e-25!129;UBERON:0007811!2.92e-25!129;UBERON:0004121!7.38e-24!169;UBERON:0000924!6.42e-23!173;UBERON:0006601!6.42e-23!173;UBERON:0000033!1.39e-22!123;UBERON:0000200!6.55e-13!6;UBERON:0000025!1.09e-12!194;UBERON:0001871!4.10e-12!7;UBERON:0003076!6.06e-12!15;UBERON:0003057!6.06e-12!15;UBERON:0002021!8.61e-11!5;UBERON:0000349!1.37e-10!5;UBERON:0001872!1.48e-10!5;UBERON:0004732!1.47e-09!13;UBERON:0000369!1.27e-08!4;UBERON:0002435!1.27e-08!4;UBERON:0000204!1.27e-08!4;UBERON:0010082!1.27e-08!4;UBERON:0004733!3.91e-08!12;UBERON:0002028!3.91e-08!12;UBERON:0007277!3.91e-08!12;UBERON:0004111!4.18e-08!241;UBERON:0002420!7.76e-08!9;UBERON:0007245!7.76e-08!9;UBERON:0010009!7.76e-08!9;UBERON:0010011!7.76e-08!9;UBERON:0000454!7.76e-08!9;UBERON:0000064!2.74e-07!219;UBERON:0002771!3.70e-07!3;UBERON:0002308!4.21e-07!9;UBERON:0000125!4.21e-07!9;UBERON:0000475!5.62e-07!365;UBERON:0005383!7.33e-07!3;UBERON:0005382!7.33e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.81e-85;22!UBERON:0001869;9.02e-77;32!UBERON:0001950;2.22e-75;20!UBERON:0000956;3.91e-75;25!UBERON:0000203;3.91e-75;25!UBERON:0001893;2.64e-72;34!UBERON:0002791;1.06e-70;32!UBERON:0003528;1.37e-65;34!UBERON:0002020;1.37e-65;34!UBERON:0002780;7.86e-49;41!UBERON:0001890;7.86e-49;41!UBERON:0000200;2.79e-34;6!UBERON:0000073;9.03e-29;53!UBERON:0002616;9.03e-29;53!UBERON:0000349;3.04e-27;5!UBERON:0001871;3.84e-20;6!UBERON:0000955;1.57e-19;68!UBERON:0002021;4.57e-19;5!UBERON:0001017;5.23e-19;75!UBERON:0001870;2.44e-18;3!UBERON:0001872;2.80e-18;5!UBERON:0001016;2.48e-16;83!UBERON:0002420;3.06e-15;9!UBERON:0007245;3.06e-15;9!UBERON:0010009;3.06e-15;9!UBERON:0010011;3.06e-15;9!UBERON:0000454;3.06e-15;9!UBERON:0000369;5.38e-13;4!UBERON:0002435;5.38e-13;4!UBERON:0000204;5.38e-13;4!UBERON:0002702;9.38e-13;2!UBERON:0002771;2.22e-12;2!UBERON:0001876;3.50e-12;2!UBERON:0001954;7.05e-12;2!UBERON:0003022;7.05e-12;2!UBERON:0002421;7.05e-12;2!UBERON:0002600;7.05e-12;2!UBERON:0007023;1.56e-11;114!UBERON:0005383;2.08e-08;3!UBERON:0005382;2.08e-08;3!UBERON:0011216;9.38e-08;132!UBERON:0009663;1.25e-07;7!UBERON:0002902;2.36e-07;1!UBERON:0009899;2.36e-07;1!UBERON:0002022;2.66e-07;1!UBERON:0002581;3.46e-07;1!UBERON:0007190;3.46e-07;1!UBERON:0003112;5.06e-07;1!UBERON:0011158;5.06e-07;1!UBERON:0003128;5.06e-07;1!UBERON:0001703;5.06e-07;1!UBERON:0002241;5.06e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.71e-86,32;UBERON:0002619,7.42e-86,22;UBERON:0001893,2.84e-81,34;UBERON:0002791,7.69e-79,32;UBERON:0001950,1.04e-75,20;UBERON:0000956,1.78e-75,25;UBERON:0000203,1.78e-75,25;UBERON:0003528,4.56e-74,34;UBERON:0002020,4.56e-74,34;UBERON:0002780,4.69e-73,41;UBERON:0001890,4.69e-73,41;UBERON:0003080,4.69e-73,41;UBERON:0006240,4.69e-73,41;UBERON:0003056,1.79e-56,61;UBERON:0000073,1.07e-55,53;UBERON:0002616,1.07e-55,53;UBERON:0001049,1.68e-52,56;UBERON:0005068,1.68e-52,56;UBERON:0006241,1.68e-52,56;UBERON:0007135,1.68e-52,56;UBERON:0001016,2.17e-49,89;UBERON:0001017,6.64e-48,81;UBERON:0000955,1.15e-45,68;UBERON:0006238,1.15e-45,68;UBERON:0003075,7.99e-41,82;UBERON:0007284,7.99e-41,82;UBERON:0002346,1.07e-38,86;UBERON:0000200,2.64e-34,6;UBERON:0007023,2.16e-33,114;UBERON:0010371,3.90e-31,104;UBERON:0000349,1.40e-27,5;UBERON:0010314,1.49e-25,132;UBERON:0004121,3.40e-25,171;UBERON:0000924,3.40e-25,171;UBERON:0006601,3.40e-25,171;UBERON:0001871,2.63e-20,6;UBERON:0002021,4.37e-19,5;UBERON:0001872,1.96e-18,5;UBERON:0001870,2.59e-18,3;UBERON:0011216,6.42e-18,223;UBERON:0002420,2.51e-15,9;UBERON:0007245,2.51e-15,9;UBERON:0010009,2.51e-15,9;UBERON:0010011,2.51e-15,9;UBERON:0000454,2.51e-15,9;UBERON:0000025,4.08e-13,192;UBERON:0000369,5.49e-13,4;UBERON:0002435,5.49e-13,4;UBERON:0000204,5.49e-13,4;UBERON:0010082,5.49e-13,4;UBERON:0002702,1.05e-12,2;UBERON:0002771,1.98e-12,2;UBERON:0001876,2.35e-12,2;UBERON:0001954,6.14e-12,2;UBERON:0003022,6.14e-12,2;UBERON:0002421,6.14e-12,2;UBERON:0002600,6.14e-12,2;UBERON:0004111,1.86e-09,240;UBERON:0005383,2.51e-08,3;UBERON:0005382,2.51e-08,3;UBERON:0000483,7.39e-08,306;UBERON:0000119,9.96e-08,309;UBERON:0009663,1.26e-07,7;UBERON:0002902,2.36e-07,1;UBERON:0009899,2.36e-07,1;UBERON:0002022,2.82e-07,1;UBERON:0002581,2.99e-07,1;UBERON:0007190,3.78e-07,1;UBERON:0003112,6.02e-07,1;UBERON:0011158,6.02e-07,1;UBERON:0003128,6.02e-07,1;UBERON:0001703,6.02e-07,1;UBERON:0002241,6.02e-07,1;UBERON:0004761,6.02e-07,1;UBERON:0009617,6.02e-07,1;UBERON:0001882,8.98e-07,1;UBERON:0005403,8.98e-07,1 | |||
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| ||
|short_description=p2@GRIN2A | |||
}} | }} |
Latest revision as of 04:08, 20 September 2015
Short description: | p2@GRIN2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRIN2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 13bp_to_ENST00000330684, NM_001134407, uc002czo.3, uc010buk.2_5end |
EntrezGene: | GRIN2A |
HGNC: | 4585 |
UniProt: | Q12879Q547U9Q59EW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 8.02e-07 | 1 |