FFCP PHASE1:Hg19::chr4:103266004..103266021,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64116 | |EntrezGene=64116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20862 | |HGNC=20862 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0K1 | |UniProt=Q9C0K1 | ||
|association_with_transcript=274bp_to_ENST00000394833_5end | |association_with_transcript=274bp_to_ENST00000394833_5end | ||
|cluster_id=chr4:103266004..103266021,- | |||
|coexpression_cluster_id=C212 | |||
|description=CAGE_peak_8_at_SLC39A8_5end | |description=CAGE_peak_8_at_SLC39A8_5end | ||
|id=chr4:103266004..103266021,- | |id=chr4:103266004..103266021,- | ||
|ontology_enrichment_celltype=CL:0000037!2.12e-07!172;CL:0000566!2.12e-07!172;CL:0000988!4.19e-07!182 | |ontology_enrichment_celltype=CL:0000037!2.12e-07!172;CL:0000566!2.12e-07!172;CL:0000988!4.19e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.38e-11;5!CL:0000764;3.31e-09;2!CL:0000558;3.31e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.04e-11,5;CL:0000764,3.31e-09,2;CL:0000765,3.31e-09,2;CL:0000050,3.31e-09,2;CL:0000038,3.31e-09,2;CL:0000558,3.31e-09,2;CL:0000547,3.31e-09,2;CL:0000549,3.31e-09,2;CL:0000550,3.31e-09,2;CL:0000552,3.31e-09,2;CL:0000763,3.82e-08,108;CL:0000049,3.82e-08,108;CL:0000988,5.33e-08,177;CL:0000037,4.30e-07,168;CL:0002032,8.28e-07,161;CL:0000837,8.28e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.60e-16!51;DOID:0060083!5.60e-16!51;DOID:1240!4.34e-15!39;DOID:8692!4.16e-13!31;DOID:1036!2.41e-08!8;DOID:0050686!5.37e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.82e-30;8!DOID:8692;8.14e-21;31!DOID:1240;7.72e-17;39!DOID:2531;1.36e-10;51!DOID:0060083;1.36e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.31e-30,8;DOID:1240,1.75e-21,39;DOID:8692,2.55e-21,31;DOID:2531,1.69e-15,51;DOID:0060083,1.69e-15,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,1.20538905604795,0,0,0.123121058076788,0.204000691244253,0,0,0.684372125364421,0.125542639594803,0.152826811495903,0,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.284338464974843,2.93600439334847,0,0,0,0,0,0,0,0,0,0.697287110717054,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,1.45104619314292,0.56738522469114,0.622822248995575,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,23.7908391442247,13.4522055115569,13.1692042387539,0.786839080455332,1.17903228824749,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0,0,0.640456598628376,0.130059347559878,0.822189523018381,0,0.579606171470105,0.14828656316206,0,0,0.226618685395132,0,1.03088233644789,0,0,0,0,0.301150238155546,0.383959833463255,1.24930726552346,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0.624320153660641,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0.680593098960126,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0.609868530647977,1.72288698817931,1.51052125730374,1.24393266018445,2.52320850875628,2.55484151353081,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0.343135620597051,0,0,0.201057944823262,0,0,0,0,0.927443239800615,0.234817388471643,0.144366447761074,0,0.380508304469197,0,0,0.246217006087397,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,3.94130590316755,2.28925928434388,0.829312462163088,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0,0.2933531432838,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,2.1100756394171,0,1.3996218765488,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0.431255149719035,0.256686072559497,0.254094624222463,0,0,0,0,0.749007023947182,0,0.414415513436035,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0.223874754722178,29.1615635939093,25.6206742004403,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,0,1.58510321173008,0,0,0.731140468893853,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.432807638929335,0.213425530045242,1.59426272728822,0.199579371432817,0.766021480529467,1.48171507906718,0.649243880549111,0.561594356226918,0.228234679033192,0.313359791546046,0,0.169291777801603,0.481764225311099,0.605399121573143,0,0,0,0.671028323677248,0.333698283423817,0.19538809540204,2.22724939116194,38.1570936737908,9.19549306818343,1.6653598399891,21.1480507631774,0.18714054040822,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0,0,0,0,0.709163045303809,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.0769502585037971,1.13942055847001,0,0.179515288819544,0,0.31900115973192,0,0,3.06579894587209,2.5116841023204,49.6972928881468,4.73750887296079,3.92125068635479,2.18168063068596,19.5446344705911,72.7929531730134,0.210998064528027,0,0.424059214301822,0.216388639742091,0,0.265372693510018,0,0.296521128680622,1.60633120630454,1.77517314159274,0.067401132980677,0,0,0.364909578431332,0,0,0,1.20990716048664,0,0.189559738885464,0.300646838828985,0.207376382794494,0,0,0,0,0,0,2.08271686002157,0,0.0870592065804026,0.17472666824203,0,0.677294319023596,0.365446585430928,0.821154570532092,0,0.0882561266915003,0.225980740780532,0.137041924646751,0.19871461170299,0.379864775735272,0,0.160317640503067,0,0,0,0,0.857974989309823,0,0,0,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.196854963029498,0.169346664131569,0,0.272406812223151,7.39464482939088,2.47570985875021,1.24632101408756,0,0,0.182248669974074,0,0.315222829196793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|short_description=p8@SLC39A8 | |short_description=p8@SLC39A8 | ||
}} | }} |
Latest revision as of 03:37, 20 September 2015
Short description: | p8@SLC39A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC39A8_5end |
Coexpression cluster: | C212_chronic_acute_Whole_Reticulocytes_leukemia_blood_CD34 |
Association with transcript: | 274bp_to_ENST00000394833_5end |
EntrezGene: | SLC39A8 |
HGNC: | 20862 |
UniProt: | Q9C0K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.04e-11 | 5 |
erythroid lineage cell | 3.31e-09 | 2 |
erythroblast | 3.31e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 3.31e-09 | 2 |
erythroid progenitor cell | 3.31e-09 | 2 |
reticulocyte | 3.31e-09 | 2 |
proerythroblast | 3.31e-09 | 2 |
basophilic erythroblast | 3.31e-09 | 2 |
polychromatophilic erythroblast | 3.31e-09 | 2 |
orthochromatic erythroblast | 3.31e-09 | 2 |
myeloid cell | 3.82e-08 | 108 |
common myeloid progenitor | 3.82e-08 | 108 |
hematopoietic cell | 5.33e-08 | 177 |
hematopoietic stem cell | 4.30e-07 | 168 |
hematopoietic oligopotent progenitor cell | 8.28e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.28e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.31e-30 | 8 |
leukemia | 1.75e-21 | 39 |
myeloid leukemia | 2.55e-21 | 31 |
hematologic cancer | 1.69e-15 | 51 |
immune system cancer | 1.69e-15 | 51 |