FFCP PHASE1:Hg19::chr11:73357614..73357632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58473 | |EntrezGene=58473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19079 | |HGNC=19079 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY96 | |UniProt=F5GY96 | ||
|association_with_transcript=0bp_to_ENST00000536527_5end | |association_with_transcript=0bp_to_ENST00000536527_5end | ||
|cluster_id=chr11:73357614..73357632,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_5_at_PLEKHB1_5end | |description=CAGE_peak_5_at_PLEKHB1_5end | ||
|id=chr11:73357614..73357632,+ | |id=chr11:73357614..73357632,+ | ||
|ontology_enrichment_celltype=CL:0002586;9.07e-12;3!CL:0000149;4.79e-09;4!CL:0000077;8.06e-07;19 | |ontology_enrichment_celltype=CL:0002322!5.72e-15!5;CL:0002586!2.21e-10!3;CL:0000149!7.13e-08!4;CL:0000147!1.91e-07!14;CL:0000077!3.57e-07!19 | ||
| | |ontology_enrichment_celltype_v019=CL:0002586;9.07e-12;3!CL:0000149;4.79e-09;4!CL:0000077;8.06e-07;19 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002586,9.32e-12,3;CL:0000149,4.89e-09,4;CL:0000077,7.81e-07,19 | ||
|ontology_enrichment_uberon=UBERON:0000966;1.65e-26;5!UBERON:0005388;1.65e-26;5!UBERON:0001802;1.65e-26;5!UBERON:0001905;7.07e-18;2!UBERON:0002757;7.07e-18;2!UBERON:0010134;7.07e-18;2!UBERON:0005408;7.07e-18;2!UBERON:0001899;7.07e-18;2!UBERON:0000970;2.47e-14;20!UBERON:0002104;1.25e-13;21!UBERON:0000020;2.11e-12;23!UBERON:0001032;7.27e-12;24!UBERON:0004456;7.27e-12;24!UBERON:0001781;9.07e-12;3!UBERON:0001782;9.07e-12;3!UBERON:0000019;1.19e-10;19!UBERON:0000047;1.19e-10;19!UBERON:0004088;1.19e-10;19!UBERON:0010230;1.19e-10;19!UBERON:0001456;1.29e-09;21!UBERON:0003296;2.17e-09;4!UBERON:0010133;2.17e-09;4!UBERON:0002784;2.17e-09;4!UBERON:0007625;3.58e-07;11 | |ontology_enrichment_development_v019=UBERON:0003056;4.12e-12;3!UBERON:0006242;2.08e-09;1 | ||
|ontology_enrichment_disease=DOID:3493!8.38e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!1.41e-16!5;UBERON:0005388!1.41e-16!5;UBERON:0001802!1.41e-16!5;UBERON:0001781!2.21e-10!3;UBERON:0001782!2.21e-10!3;UBERON:0005424!2.21e-10!3;UBERON:0000970!4.56e-09!20;UBERON:0002104!1.45e-08!21;UBERON:0001905!5.68e-08!2;UBERON:0002757!5.68e-08!2;UBERON:0010134!5.68e-08!2;UBERON:0002784!5.68e-08!2;UBERON:0005408!5.68e-08!2;UBERON:0001899!5.68e-08!2;UBERON:0000020!1.08e-07!23;UBERON:0000019!2.48e-07!19;UBERON:0000047!2.48e-07!19;UBERON:0004088!2.48e-07!19;UBERON:0003072!2.48e-07!19;UBERON:0003071!2.48e-07!19;UBERON:0004128!2.48e-07!19;UBERON:0001032!2.58e-07!24;UBERON:0004456!2.58e-07!24;UBERON:0007625!6.51e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.65e-26;5!UBERON:0005388;1.65e-26;5!UBERON:0001802;1.65e-26;5!UBERON:0001905;7.07e-18;2!UBERON:0002757;7.07e-18;2!UBERON:0010134;7.07e-18;2!UBERON:0005408;7.07e-18;2!UBERON:0001899;7.07e-18;2!UBERON:0000970;2.47e-14;20!UBERON:0002104;1.25e-13;21!UBERON:0000020;2.11e-12;23!UBERON:0001032;7.27e-12;24!UBERON:0004456;7.27e-12;24!UBERON:0001781;9.07e-12;3!UBERON:0001782;9.07e-12;3!UBERON:0000019;1.19e-10;19!UBERON:0000047;1.19e-10;19!UBERON:0004088;1.19e-10;19!UBERON:0010230;1.19e-10;19!UBERON:0001456;1.29e-09;21!UBERON:0003296;2.17e-09;4!UBERON:0010133;2.17e-09;4!UBERON:0002784;2.17e-09;4!UBERON:0007625;3.58e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,3.97e-22,6;UBERON:0005388,3.97e-22,6;UBERON:0001802,3.97e-22,6;UBERON:0001905,7.07e-18,2;UBERON:0002757,7.07e-18,2;UBERON:0010134,7.07e-18,2;UBERON:0005408,7.07e-18,2;UBERON:0001899,7.07e-18,2;UBERON:0000970,1.25e-13,21;UBERON:0002104,1.25e-13,21;UBERON:0000020,7.27e-12,24;UBERON:0001032,7.27e-12,24;UBERON:0004456,7.27e-12,24;UBERON:0001782,9.32e-12,3;UBERON:0005424,9.32e-12,3;UBERON:0000019,4.16e-10,20;UBERON:0000047,4.16e-10,20;UBERON:0010312,4.16e-10,20;UBERON:0004088,4.16e-10,20;UBERON:0010230,4.16e-10,20;UBERON:0003072,4.16e-10,20;UBERON:0004128,4.16e-10,20;UBERON:0003071,4.16e-10,20;UBERON:0003296,2.17e-09,4;UBERON:0010133,2.17e-09,4;UBERON:0002784,2.17e-09,4;UBERON:0001456,3.59e-09,22;UBERON:0001781,4.89e-09,4;UBERON:0007625,3.58e-07,11 | |||
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| ||
|short_description=p5@PLEKHB1 | |short_description=p5@PLEKHB1 | ||
}} | }} |
Latest revision as of 03:17, 20 September 2015
Short description: | p5@PLEKHB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLEKHB1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000536527_5end |
EntrezGene: | PLEKHB1 |
HGNC: | 19079 |
UniProt: | F5GY96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 9.32e-12 | 3 |
visual pigment cell | 4.89e-09 | 4 |
mesothelial cell | 7.81e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
retina | 3.97e-22 | 6 |
photoreceptor array | 3.97e-22 | 6 |
posterior segment of eyeball | 3.97e-22 | 6 |
pineal body | 7.07e-18 | 2 |
regional part of epithalamus | 7.07e-18 | 2 |
secretory circumventricular organ | 7.07e-18 | 2 |
circumventricular organ | 7.07e-18 | 2 |
epithalamus | 7.07e-18 | 2 |
eye | 1.25e-13 | 21 |
visual system | 1.25e-13 | 21 |
sense organ | 7.27e-12 | 24 |
sensory system | 7.27e-12 | 24 |
entire sense organ system | 7.27e-12 | 24 |
pigmented layer of retina | 9.32e-12 | 3 |
presumptive retinal pigmented epithelium | 9.32e-12 | 3 |
camera-type eye | 4.16e-10 | 20 |
simple eye | 4.16e-10 | 20 |
immature eye | 4.16e-10 | 20 |
ocular region | 4.16e-10 | 20 |
eyeball of camera-type eye | 4.16e-10 | 20 |
optic cup | 4.16e-10 | 20 |
optic vesicle | 4.16e-10 | 20 |
eye primordium | 4.16e-10 | 20 |
gland of diencephalon | 2.17e-09 | 4 |
neuroendocrine gland | 2.17e-09 | 4 |
regional part of diencephalon | 2.17e-09 | 4 |
face | 3.59e-09 | 22 |
layer of retina | 4.89e-09 | 4 |
pigment epithelium of eye | 3.58e-07 | 11 |