FFCP PHASE1:Hg19::chr17:38859618..38859626,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=192666 | |EntrezGene=192666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18527 | |HGNC=18527 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M2I5 | |UniProt=Q2M2I5 | ||
|association_with_transcript=350bp_to_BC111964,BC111968_5end | |association_with_transcript=350bp_to_BC111964,BC111968_5end | ||
|cluster_id=chr17:38859618..38859626,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_7_at_KRT24_5end | |description=CAGE_peak_7_at_KRT24_5end | ||
|id=chr17:38859618..38859626,- | |id=chr17:38859618..38859626,- | ||
|ontology_enrichment_celltype=CL:0002541!1.22e-44!3;CL:0002537!1.59e-27!5;CL:0000349!2.89e-12!3;CL:0002577!2.89e-12!3;CL:0002623!3.24e-12!3;CL:0000622!7.49e-08!5;CL:0000154!9.49e-07!6 | |ontology_enrichment_celltype=CL:0002541!1.22e-44!3;CL:0002537!1.59e-27!5;CL:0000349!2.89e-12!3;CL:0002577!2.89e-12!3;CL:0002623!3.24e-12!3;CL:0000622!7.49e-08!5;CL:0000154!9.49e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.53e-66;3!CL:0000349;3.83e-42;19!CL:0002537;1.81e-40;5!CL:0000134;1.66e-12;55!CL:0000723;6.41e-09;61!CL:0000034;1.24e-08;69!CL:0000048;1.34e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.53e-66,3;CL:0000349,3.83e-42,19;CL:0002537,1.81e-40,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.06e-59!14;UBERON:0000158!6.06e-59!14;UBERON:0000476!1.22e-44!3;UBERON:0000920!1.22e-44!3;UBERON:0003124!9.27e-43!7;UBERON:0000478!1.05e-34!24;UBERON:0000305!5.35e-20!7;UBERON:0004871!1.22e-17!8;UBERON:0004923!5.77e-15!57;UBERON:0001987!1.57e-09!4;UBERON:0004340!1.57e-09!4;UBERON:0001044!9.49e-07!6;UBERON:0003293!9.49e-07!6;UBERON:0003294!9.49e-07!6;UBERON:0010047!9.49e-07!6;UBERON:0000167!9.49e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.78e-79;10!UBERON:0000158;5.78e-79;10!UBERON:0003124;6.53e-66;3!UBERON:0000920;6.53e-66;3!UBERON:0000478;1.33e-33;24!UBERON:0000305;2.74e-29;7!UBERON:0004923;1.56e-10;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.53e-66,3;UBERON:0005631,9.13e-57,14;UBERON:0000158,9.13e-57,14;UBERON:0000478,1.33e-33,24;UBERON:0000305,2.74e-29,7;UBERON:0003124,4.86e-29,7;UBERON:0004871,8.65e-26,8;UBERON:0004923,7.62e-13,66 | |||
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|short_description=p7@KRT24 | |short_description=p7@KRT24 | ||
}} | }} |
Latest revision as of 03:12, 20 September 2015
Short description: | p7@KRT24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_KRT24_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 350bp_to_BC111964, BC111968_5end |
EntrezGene: | KRT24 |
HGNC: | 18527 |
UniProt: | Q2M2I5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.53e-66 | 3 |
extraembryonic cell | 3.83e-42 | 19 |
amnion mesenchymal stem cell | 1.81e-40 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.53e-66 | 3 |
extraembryonic membrane | 9.13e-57 | 14 |
membranous layer | 9.13e-57 | 14 |
extraembryonic structure | 1.33e-33 | 24 |
amnion | 2.74e-29 | 7 |
chorion | 4.86e-29 | 7 |
somatic layer of lateral plate mesoderm | 8.65e-26 | 8 |
organ component layer | 7.62e-13 | 66 |