FFCP PHASE1:Hg19::chr10:96522430..96522444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1557 | |EntrezGene=1557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2621 | |HGNC=2621 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000480405_5end | |association_with_transcript=0bp_to_ENST00000480405_5end | ||
|cluster_id=chr10:96522430..96522444,+ | |||
|coexpression_cluster_id=C211 | |coexpression_cluster_id=C211 | ||
|description=CAGE_peak_1_at_CYP2C19_5end | |description=CAGE_peak_1_at_CYP2C19_5end | ||
|id=chr10:96522430..96522444,+ | |id=chr10:96522430..96522444,+ | ||
|ontology_enrichment_celltype=CL:0000181!7.45e-09!12;CL:0000417!7.45e-09!12;CL:0000668!7.45e-09!12;CL:0000414!7.45e-09!12;CL:0000412!7.45e-09!12;CL:0000182!7.45e-09!12;CL:0002563!6.08e-07!4 | |ontology_enrichment_celltype=CL:0000181!7.45e-09!12;CL:0000417!7.45e-09!12;CL:0000668!7.45e-09!12;CL:0000414!7.45e-09!12;CL:0000412!7.45e-09!12;CL:0000182!7.45e-09!12;CL:0002563!6.08e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.25e-13;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.19e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.57e-15;11!UBERON:0009497;1.63e-12;13!UBERON:0006242;3.12e-11;1 | |||
|ontology_enrichment_disease=DOID:114!3.94e-13!2;DOID:178!2.17e-07!1;DOID:326!2.17e-07!1;DOID:3978!2.17e-07!1;DOID:3394!2.17e-07!1;DOID:5844!2.17e-07!1;DOID:3119!4.77e-07!14;DOID:1287!5.38e-07!4 | |ontology_enrichment_disease=DOID:114!3.94e-13!2;DOID:178!2.17e-07!1;DOID:326!2.17e-07!1;DOID:3978!2.17e-07!1;DOID:3394!2.17e-07!1;DOID:5844!2.17e-07!1;DOID:3119!4.77e-07!14;DOID:1287!5.38e-07!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.60e-19!35;UBERON:0000160!7.56e-17!27;UBERON:0001052!2.38e-14!4;UBERON:0000059!4.45e-14!11;UBERON:0004921!4.68e-12!129;UBERON:0004185!4.68e-12!129;UBERON:0009497!7.73e-12!25;UBERON:0000015!7.73e-12!25;UBERON:0002423!7.73e-12!25;UBERON:0006235!7.73e-12!25;UBERON:0004161!7.73e-12!25;UBERON:0002107!8.70e-12!19;UBERON:0006925!8.70e-12!19;UBERON:0008836!8.70e-12!19;UBERON:0004907!1.37e-11!5;UBERON:0001007!9.79e-11!155;UBERON:0001555!9.79e-11!155;UBERON:0007026!9.79e-11!155;UBERON:0008835!4.21e-10!22;UBERON:0003894!4.21e-10!22;UBERON:0003929!5.50e-10!54;UBERON:0009854!1.23e-09!23;UBERON:0004119!1.56e-09!169;UBERON:0000925!1.56e-09!169;UBERON:0006595!1.56e-09!169;UBERON:0007499!8.06e-09!25;UBERON:0005057!1.85e-08!26;UBERON:0009856!1.85e-08!26;UBERON:0002365!5.33e-07!31;UBERON:0002330!5.33e-07!31;UBERON:0001242!6.08e-07!4;UBERON:0001262!6.08e-07!4;UBERON:0004786!6.08e-07!4;UBERON:0004808!6.08e-07!4;UBERON:0001277!6.08e-07!4;UBERON:0001155!7.89e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!4.60e-19!35;UBERON:0000160!7.56e-17!27;UBERON:0001052!2.38e-14!4;UBERON:0000059!4.45e-14!11;UBERON:0004921!4.68e-12!129;UBERON:0004185!4.68e-12!129;UBERON:0009497!7.73e-12!25;UBERON:0000015!7.73e-12!25;UBERON:0002423!7.73e-12!25;UBERON:0006235!7.73e-12!25;UBERON:0004161!7.73e-12!25;UBERON:0002107!8.70e-12!19;UBERON:0006925!8.70e-12!19;UBERON:0008836!8.70e-12!19;UBERON:0004907!1.37e-11!5;UBERON:0001007!9.79e-11!155;UBERON:0001555!9.79e-11!155;UBERON:0007026!9.79e-11!155;UBERON:0008835!4.21e-10!22;UBERON:0003894!4.21e-10!22;UBERON:0003929!5.50e-10!54;UBERON:0009854!1.23e-09!23;UBERON:0004119!1.56e-09!169;UBERON:0000925!1.56e-09!169;UBERON:0006595!1.56e-09!169;UBERON:0007499!8.06e-09!25;UBERON:0005057!1.85e-08!26;UBERON:0009856!1.85e-08!26;UBERON:0002365!5.33e-07!31;UBERON:0002330!5.33e-07!31;UBERON:0001242!6.08e-07!4;UBERON:0001262!6.08e-07!4;UBERON:0004786!6.08e-07!4;UBERON:0004808!6.08e-07!4;UBERON:0001277!6.08e-07!4;UBERON:0001155!7.89e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.63e-20;22!UBERON:0000160;1.28e-19;17!UBERON:0002423;6.50e-19;25!UBERON:0002108;7.38e-19;4!UBERON:0002107;1.33e-18;19!UBERON:0006925;1.33e-18;19!UBERON:0004921;7.96e-13;33!UBERON:0002365;2.60e-11;31!UBERON:0002330;2.60e-11;31!UBERON:0001007;8.69e-10;81!UBERON:0002368;1.18e-09;33!UBERON:0000059;1.13e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.26e-19,17;UBERON:0009497,6.59e-19,25;UBERON:0000015,6.59e-19,25;UBERON:0002423,6.59e-19,25;UBERON:0006235,6.59e-19,25;UBERON:0004161,6.59e-19,25;UBERON:0002108,7.61e-19,4;UBERON:0002107,1.33e-18,19;UBERON:0006925,1.33e-18,19;UBERON:0008836,1.33e-18,19;UBERON:0005409,4.46e-18,25;UBERON:0008835,5.12e-16,22;UBERON:0003894,5.12e-16,22;UBERON:0009854,2.64e-15,23;UBERON:0007499,4.74e-14,25;UBERON:0009856,1.70e-13,26;UBERON:0004921,3.68e-12,118;UBERON:0002365,2.97e-11,31;UBERON:0002330,2.97e-11,31;UBERON:0001007,3.27e-11,145;UBERON:0001555,3.27e-11,145;UBERON:0007026,3.27e-11,145;UBERON:0004119,5.83e-10,160;UBERON:0000925,5.83e-10,160;UBERON:0006595,5.83e-10,160;UBERON:0002368,6.40e-10,35;UBERON:0000059,1.10e-08,11;UBERON:0003929,2.17e-08,54;UBERON:0005172,2.17e-08,54;UBERON:0005173,2.17e-08,54;UBERON:0000949,1.28e-07,45;UBERON:0011216,1.50e-07,223;UBERON:0002417,1.77e-07,60;UBERON:0000916,1.77e-07,60 | |||
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|short_description=p1@CYP2C19 | |short_description=p1@CYP2C19 | ||
}} | }} |
Latest revision as of 02:35, 20 September 2015
Short description: | p1@CYP2C19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYP2C19_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 0bp_to_ENST00000480405_5end |
EntrezGene: | CYP2C19 |
HGNC: | 2621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.19e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.26e-19 | 17 |
epithelium of foregut-midgut junction | 6.59e-19 | 25 |
anatomical boundary | 6.59e-19 | 25 |
hepatobiliary system | 6.59e-19 | 25 |
foregut-midgut junction | 6.59e-19 | 25 |
septum transversum | 6.59e-19 | 25 |
small intestine | 7.61e-19 | 4 |
liver | 1.33e-18 | 19 |
digestive gland | 1.33e-18 | 19 |
liver bud | 1.33e-18 | 19 |
gastrointestinal system | 4.46e-18 | 25 |
hepatic diverticulum | 5.12e-16 | 22 |
liver primordium | 5.12e-16 | 22 |
digestive tract diverticulum | 2.64e-15 | 23 |
epithelial sac | 4.74e-14 | 25 |
sac | 1.70e-13 | 26 |
subdivision of digestive tract | 3.68e-12 | 118 |
exocrine gland | 2.97e-11 | 31 |
exocrine system | 2.97e-11 | 31 |
digestive system | 3.27e-11 | 145 |
digestive tract | 3.27e-11 | 145 |
primitive gut | 3.27e-11 | 145 |
endoderm-derived structure | 5.83e-10 | 160 |
endoderm | 5.83e-10 | 160 |
presumptive endoderm | 5.83e-10 | 160 |
endocrine gland | 6.40e-10 | 35 |
large intestine | 1.10e-08 | 11 |
gut epithelium | 2.17e-08 | 54 |
abdomen element | 2.17e-08 | 54 |
abdominal segment element | 2.17e-08 | 54 |
endocrine system | 1.28e-07 | 45 |
organ system subdivision | 1.50e-07 | 223 |
abdominal segment of trunk | 1.77e-07 | 60 |
abdomen | 1.77e-07 | 60 |