FFCP PHASE1:Hg19::chr1:204840011..204840017,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23114 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29866 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENST00000514644,uc009xbg.1_5end | |||
|cluster_id=chr1:204840011..204840017,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_NFASC_5end | |||
|id=chr1:204840011..204840017,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.19e-11;82!UBERON:0005425;3.57e-11;1!UBERON:0006222;8.61e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.10e-94!57;UBERON:0005068!6.10e-94!57;UBERON:0006241!6.10e-94!57;UBERON:0007135!6.10e-94!57;UBERON:0002616!1.24e-75!59;UBERON:0002780!1.57e-74!41;UBERON:0001890!1.57e-74!41;UBERON:0006240!1.57e-74!41;UBERON:0001017!2.25e-73!82;UBERON:0005743!2.59e-73!86;UBERON:0003080!1.23e-72!42;UBERON:0001893!2.79e-71!34;UBERON:0002020!6.37e-71!34;UBERON:0003528!6.37e-71!34;UBERON:0003075!1.73e-70!86;UBERON:0007284!1.73e-70!86;UBERON:0000073!1.81e-69!94;UBERON:0001016!1.81e-69!94;UBERON:0002791!1.76e-67!33;UBERON:0002346!5.13e-67!90;UBERON:0000955!1.34e-66!69;UBERON:0006238!1.34e-66!69;UBERON:0007023!3.33e-66!115;UBERON:0001869!1.70e-63!32;UBERON:0003056!7.36e-52!61;UBERON:0002619!9.30e-50!22;UBERON:0001950!3.14e-48!20;UBERON:0000956!1.54e-43!25;UBERON:0000203!1.54e-43!25;UBERON:0000033!5.73e-39!123;UBERON:0000153!8.37e-37!129;UBERON:0007811!8.37e-37!129;UBERON:0004121!2.31e-35!169;UBERON:0000924!2.33e-34!173;UBERON:0006601!2.33e-34!173;UBERON:0002308!5.95e-30!9;UBERON:0000125!5.95e-30!9;UBERON:0000200!5.90e-25!6;UBERON:0002420!2.83e-23!9;UBERON:0007245!2.83e-23!9;UBERON:0010009!2.83e-23!9;UBERON:0010011!2.83e-23!9;UBERON:0000454!2.83e-23!9;UBERON:0009663!3.18e-22!7;UBERON:0000025!3.97e-22!194;UBERON:0003076!2.85e-21!15;UBERON:0003057!2.85e-21!15;UBERON:0002298!8.09e-19!8;UBERON:0004111!1.41e-18!241;UBERON:0000477!2.08e-15!286;UBERON:0004732!3.31e-15!13;UBERON:0000483!1.53e-14!309;UBERON:0000119!2.56e-14!312;UBERON:0002021!3.01e-14!5;UBERON:0006331!1.06e-13!3;UBERON:0000475!1.39e-13!365;UBERON:0000064!1.46e-13!219;UBERON:0001872!1.61e-13!5;UBERON:0002240!1.77e-13!3;UBERON:0000988!2.20e-13!3;UBERON:0001871!2.53e-13!7;UBERON:0002771!4.13e-13!3;UBERON:0004733!4.23e-12!12;UBERON:0002028!4.23e-12!12;UBERON:0007277!4.23e-12!12;UBERON:0000369!2.31e-10!4;UBERON:0002435!2.31e-10!4;UBERON:0000204!2.31e-10!4;UBERON:0010082!2.31e-10!4;UBERON:0005162!2.62e-10!2;UBERON:0000122!2.62e-10!2;UBERON:0001897!3.27e-10!2;UBERON:0001875!5.32e-10!2;UBERON:0006514!5.32e-10!2;UBERON:0001870!1.39e-09!2;UBERON:0002148!1.45e-09!2;UBERON:0009662!1.45e-09!2;UBERON:0000062!3.83e-09!511;UBERON:0002360!7.44e-09!2;UBERON:0000094!7.44e-09!2;UBERON:0007645!7.44e-09!2;UBERON:0000349!1.02e-08!5;UBERON:0005174!2.90e-08!5;UBERON:0001137!2.90e-08!5;UBERON:0002680!1.31e-07!9;UBERON:0001895!1.31e-07!9;UBERON:0010092!1.31e-07!9;UBERON:0000481!5.07e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.07e-48;41!UBERON:0001890;1.07e-48;41!UBERON:0001893;2.34e-42;34!UBERON:0002420;3.69e-37;9!UBERON:0000125;3.69e-37;9!UBERON:0007245;3.69e-37;9!UBERON:0002308;3.69e-37;9!UBERON:0010009;3.69e-37;9!UBERON:0010011;3.69e-37;9!UBERON:0000454;3.69e-37;9!UBERON:0003528;3.24e-36;34!UBERON:0002020;3.24e-36;34!UBERON:0002791;3.19e-35;32!UBERON:0001869;3.19e-35;32!UBERON:0009663;1.79e-33;7!UBERON:0000073;1.05e-31;53!UBERON:0002616;1.05e-31;53!UBERON:0005162;1.14e-20;2!UBERON:0000122;1.14e-20;2!UBERON:0001897;2.73e-20;2!UBERON:0010225;2.73e-20;2!UBERON:0001875;7.90e-20;2!UBERON:0006514;7.90e-20;2!UBERON:0002619;1.81e-19;22!UBERON:0002021;8.56e-18;5!UBERON:0000349;1.43e-17;5!UBERON:0000956;3.78e-17;25!UBERON:0000203;3.78e-17;25!UBERON:0001017;2.73e-16;75!UBERON:0000955;5.19e-16;68!UBERON:0001950;7.47e-16;20!UBERON:0001016;3.76e-15;83!UBERON:0001894;6.46e-13;7!UBERON:0007023;8.60e-13;114!UBERON:0002336;2.93e-11;1!UBERON:0011215;2.93e-11;1!UBERON:0001018;2.93e-11;1!UBERON:0002473;2.93e-11;1!UBERON:0005340;2.93e-11;1!UBERON:0003544;2.93e-11;1!UBERON:0005970;2.93e-11;1!UBERON:0002316;2.93e-11;1!UBERON:0001020;2.93e-11;1!UBERON:0002437;2.93e-11;1!UBERON:0000941;3.57e-11;1!UBERON:0001785;3.57e-11;1!UBERON:0002464;3.57e-11;1!UBERON:0004904;3.57e-11;1!UBERON:0001021;3.57e-11;1!UBERON:0002902;8.61e-11;1!UBERON:0001882;8.61e-11;1!UBERON:0002038;8.61e-11;1!UBERON:0003112;8.61e-11;1!UBERON:0011158;8.61e-11;1!UBERON:0009661;8.61e-11;1!UBERON:0002950;8.61e-11;1!UBERON:0009899;8.61e-11;1!UBERON:0007190;8.61e-11;1!UBERON:0003128;8.61e-11;1!UBERON:0005403;8.61e-11;1!UBERON:0001891;8.61e-11;1!UBERON:0001703;8.61e-11;1!UBERON:0002241;8.61e-11;1!UBERON:0002784;1.27e-10;4!UBERON:0000369;2.15e-10;4!UBERON:0002435;2.15e-10;4!UBERON:0000204;2.15e-10;4!UBERON:0011216;1.55e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.55e-62,41;UBERON:0001890,1.55e-62,41;UBERON:0003080,1.55e-62,41;UBERON:0006240,1.55e-62,41;UBERON:0001049,2.79e-57,56;UBERON:0005068,2.79e-57,56;UBERON:0006241,2.79e-57,56;UBERON:0007135,2.79e-57,56;UBERON:0000073,4.75e-54,53;UBERON:0002616,4.75e-54,53;UBERON:0001893,8.97e-51,34;UBERON:0003056,6.33e-47,61;UBERON:0003528,1.68e-43,34;UBERON:0002020,1.68e-43,34;UBERON:0003075,5.18e-43,82;UBERON:0007284,5.18e-43,82;UBERON:0000955,4.01e-41,68;UBERON:0006238,4.01e-41,68;UBERON:0002346,6.50e-41,86;UBERON:0002791,2.11e-39,32;UBERON:0001869,2.42e-39,32;UBERON:0001016,1.52e-38,89;UBERON:0001017,1.56e-38,81;UBERON:0002420,1.63e-37,9;UBERON:0007245,1.63e-37,9;UBERON:0010009,1.63e-37,9;UBERON:0010011,1.63e-37,9;UBERON:0000454,1.63e-37,9;UBERON:0000125,2.88e-37,9;UBERON:0002308,2.88e-37,9;UBERON:0009663,1.01e-33,7;UBERON:0010371,1.92e-33,104;UBERON:0007023,1.90e-30,114;UBERON:0010314,1.11e-28,132;UBERON:0005162,1.14e-20,2;UBERON:0000122,1.14e-20,2;UBERON:0001897,1.86e-20,2;UBERON:0010225,1.86e-20,2;UBERON:0001875,5.40e-20,2;UBERON:0006514,5.40e-20,2;UBERON:0002619,1.51e-19,22;UBERON:0004121,4.40e-19,171;UBERON:0000924,4.40e-19,171;UBERON:0006601,4.40e-19,171;UBERON:0000349,7.44e-18,5;UBERON:0002021,9.91e-18,5;UBERON:0000956,3.22e-17,25;UBERON:0000203,3.22e-17,25;UBERON:0001950,7.49e-16,20;UBERON:0011216,1.25e-15,223;UBERON:0000025,5.28e-15,192;UBERON:0001894,6.88e-13,7;UBERON:0006222,6.88e-13,7;UBERON:0004111,1.94e-11,240;UBERON:0002336,3.08e-11,1;UBERON:0011215,3.08e-11,1;UBERON:0001018,3.08e-11,1;UBERON:0002473,3.08e-11,1;UBERON:0005340,3.08e-11,1;UBERON:0003544,3.08e-11,1;UBERON:0005970,3.08e-11,1;UBERON:0002316,3.08e-11,1;UBERON:0001020,3.08e-11,1;UBERON:0002437,3.08e-11,1;UBERON:0000941,3.41e-11,1;UBERON:0001785,3.41e-11,1;UBERON:0002464,3.41e-11,1;UBERON:0004904,3.41e-11,1;UBERON:0001021,3.41e-11,1;UBERON:0003902,3.41e-11,1;UBERON:0005425,3.41e-11,1;UBERON:0002038,7.46e-11,1;UBERON:0009661,7.46e-11,1;UBERON:0002950,7.46e-11,1;UBERON:0001891,7.46e-11,1;UBERON:0009616,7.46e-11,1;UBERON:0010286,7.46e-11,1;UBERON:0001882,8.22e-11,1;UBERON:0005403,8.22e-11,1;UBERON:0002902,9.05e-11,1;UBERON:0009899,9.05e-11,1;UBERON:0002784,1.05e-10,4;UBERON:0007190,1.10e-10,1;UBERON:0003112,1.61e-10,1;UBERON:0011158,1.61e-10,1;UBERON:0003128,1.61e-10,1;UBERON:0001703,1.61e-10,1;UBERON:0002241,1.61e-10,1;UBERON:0004761,1.61e-10,1;UBERON:0009617,1.61e-10,1;UBERON:0000369,1.86e-10,4;UBERON:0002435,1.86e-10,4;UBERON:0000204,1.86e-10,4;UBERON:0010082,1.86e-10,4;UBERON:0000483,1.55e-09,306;UBERON:0000119,2.06e-09,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68803299692615,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,1.4471572635049,0,0.331737779793674,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57226004797588,0,1.1713222286267,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,1.77976992559591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77064427945048,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.876336514945499,0,0.998361463831671,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41304295212211,2.8339315265117,1.27707087245721,0.41023272848151,0,1.31398779682014,1.13032951942296,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2156765231311,0.781078098613847,0.206686796501184,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,0.747667062745149,0.920818829879887,0,0,0,0.471346769748006,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,4.226557275834,0,0,0,0,0,0,0,0,0,1.43339583151451,0,1.69978725477287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,3.82702084689012,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@NFASC | |||
}} |
Latest revision as of 01:52, 20 September 2015
Short description: | p5@NFASC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NFASC_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 21bp_to_ENST00000514644, uc009xbg.1_5end |
EntrezGene: | NFASC |
HGNC: | 29866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data