FFCP PHASE1:Hg19::chr19:55953953..55953965,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=729956 | |EntrezGene=729956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35409 | |HGNC=35409 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-182bp_to_ENST00000432840_5end | |association_with_transcript=-182bp_to_ENST00000432840_5end | ||
|cluster_id=chr19:55953953..55953965,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_SHISA7_5end | |description=CAGE_peak_2_at_SHISA7_5end | ||
|id=chr19:55953953..55953965,- | |id=chr19:55953953..55953965,- | ||
|ontology_enrichment_celltype=CL:0000764!3.23e-09!2;CL:0000765!3.23e-09!2;CL:0000050!3.23e-09!2;CL:0000038!3.23e-09!2;CL:0000558!3.23e-09!2;CL:0000547!3.23e-09!2;CL:0000549!3.23e-09!2;CL:0000550!3.23e-09!2;CL:0000552!3.23e-09!2 | |ontology_enrichment_celltype=CL:0000764!3.23e-09!2;CL:0000765!3.23e-09!2;CL:0000050!3.23e-09!2;CL:0000038!3.23e-09!2;CL:0000558!3.23e-09!2;CL:0000547!3.23e-09!2;CL:0000549!3.23e-09!2;CL:0000550!3.23e-09!2;CL:0000552!3.23e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.93e-15;2!CL:0000558;1.93e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.79e-15,2;CL:0000765,1.79e-15,2;CL:0000050,1.79e-15,2;CL:0000038,1.79e-15,2;CL:0000558,1.79e-15,2;CL:0000547,1.79e-15,2;CL:0000549,1.79e-15,2;CL:0000550,1.79e-15,2;CL:0000552,1.79e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.11e-14;82!UBERON:0006241;1.32e-10;3!UBERON:0003057;1.32e-10;3!UBERON:0005425;6.39e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.17e-103!57;UBERON:0005068!2.17e-103!57;UBERON:0006241!2.17e-103!57;UBERON:0007135!2.17e-103!57;UBERON:0002616!3.11e-89!59;UBERON:0002780!1.66e-85!41;UBERON:0001890!1.66e-85!41;UBERON:0006240!1.66e-85!41;UBERON:0002020!5.15e-84!34;UBERON:0003528!5.15e-84!34;UBERON:0001893!1.02e-83!34;UBERON:0003080!2.43e-83!42;UBERON:0002791!2.84e-80!33;UBERON:0000955!3.08e-78!69;UBERON:0006238!3.08e-78!69;UBERON:0001017!4.55e-76!82;UBERON:0001869!7.30e-76!32;UBERON:0005743!8.53e-76!86;UBERON:0003075!5.42e-73!86;UBERON:0007284!5.42e-73!86;UBERON:0000073!1.36e-71!94;UBERON:0001016!1.36e-71!94;UBERON:0002346!2.21e-69!90;UBERON:0007023!3.14e-68!115;UBERON:0003056!3.60e-59!61;UBERON:0002619!8.24e-59!22;UBERON:0000956!1.80e-51!25;UBERON:0000203!1.80e-51!25;UBERON:0001950!2.44e-51!20;UBERON:0000033!2.67e-45!123;UBERON:0000153!8.29e-43!129;UBERON:0007811!8.29e-43!129;UBERON:0004121!2.82e-36!169;UBERON:0000924!3.09e-35!173;UBERON:0006601!3.09e-35!173;UBERON:0002308!3.12e-35!9;UBERON:0000125!3.12e-35!9;UBERON:0002420!5.25e-35!9;UBERON:0007245!5.25e-35!9;UBERON:0010009!5.25e-35!9;UBERON:0010011!5.25e-35!9;UBERON:0000454!5.25e-35!9;UBERON:0009663!1.78e-27!7;UBERON:0000025!6.52e-26!194;UBERON:0002298!2.01e-24!8;UBERON:0000200!8.86e-24!6;UBERON:0000349!1.37e-20!5;UBERON:0003076!2.19e-20!15;UBERON:0003057!2.19e-20!15;UBERON:0004111!2.62e-20!241;UBERON:0004732!6.57e-19!13;UBERON:0001871!6.68e-18!7;UBERON:0000477!1.04e-16!286;UBERON:0000064!1.68e-16!219;UBERON:0000369!6.35e-16!4;UBERON:0002435!6.35e-16!4;UBERON:0000204!6.35e-16!4;UBERON:0010082!6.35e-16!4;UBERON:0004733!1.08e-15!12;UBERON:0002028!1.08e-15!12;UBERON:0007277!1.08e-15!12;UBERON:0000483!9.08e-15!309;UBERON:0000119!1.55e-14!312;UBERON:0006331!1.42e-13!3;UBERON:0001872!2.52e-13!5;UBERON:0000988!4.69e-13!3;UBERON:0002771!5.51e-13!3;UBERON:0000475!1.08e-12!365;UBERON:0001896!1.09e-12!3;UBERON:0005290!1.09e-12!3;UBERON:0010096!1.09e-12!3;UBERON:0002021!1.10e-12!5;UBERON:0005383!3.06e-12!3;UBERON:0005382!3.06e-12!3;UBERON:0001897!7.22e-10!2;UBERON:0005162!1.10e-09!2;UBERON:0000122!1.10e-09!2;UBERON:0002148!1.74e-09!2;UBERON:0009662!1.74e-09!2;UBERON:0001954!2.23e-09!2;UBERON:0003022!2.23e-09!2;UBERON:0002421!2.23e-09!2;UBERON:0002600!2.23e-09!2;UBERON:0001870!2.74e-09!2;UBERON:0001876!2.98e-09!2;UBERON:0001875!3.10e-09!2;UBERON:0006514!3.10e-09!2;UBERON:0001873!7.24e-09!2;UBERON:0010122!7.24e-09!2;UBERON:0000062!1.62e-07!511;UBERON:0002680!1.96e-07!9;UBERON:0001895!1.96e-07!9;UBERON:0010092!1.96e-07!9;UBERON:0000481!2.91e-07!347 | |ontology_enrichment_uberon=UBERON:0001049!2.17e-103!57;UBERON:0005068!2.17e-103!57;UBERON:0006241!2.17e-103!57;UBERON:0007135!2.17e-103!57;UBERON:0002616!3.11e-89!59;UBERON:0002780!1.66e-85!41;UBERON:0001890!1.66e-85!41;UBERON:0006240!1.66e-85!41;UBERON:0002020!5.15e-84!34;UBERON:0003528!5.15e-84!34;UBERON:0001893!1.02e-83!34;UBERON:0003080!2.43e-83!42;UBERON:0002791!2.84e-80!33;UBERON:0000955!3.08e-78!69;UBERON:0006238!3.08e-78!69;UBERON:0001017!4.55e-76!82;UBERON:0001869!7.30e-76!32;UBERON:0005743!8.53e-76!86;UBERON:0003075!5.42e-73!86;UBERON:0007284!5.42e-73!86;UBERON:0000073!1.36e-71!94;UBERON:0001016!1.36e-71!94;UBERON:0002346!2.21e-69!90;UBERON:0007023!3.14e-68!115;UBERON:0003056!3.60e-59!61;UBERON:0002619!8.24e-59!22;UBERON:0000956!1.80e-51!25;UBERON:0000203!1.80e-51!25;UBERON:0001950!2.44e-51!20;UBERON:0000033!2.67e-45!123;UBERON:0000153!8.29e-43!129;UBERON:0007811!8.29e-43!129;UBERON:0004121!2.82e-36!169;UBERON:0000924!3.09e-35!173;UBERON:0006601!3.09e-35!173;UBERON:0002308!3.12e-35!9;UBERON:0000125!3.12e-35!9;UBERON:0002420!5.25e-35!9;UBERON:0007245!5.25e-35!9;UBERON:0010009!5.25e-35!9;UBERON:0010011!5.25e-35!9;UBERON:0000454!5.25e-35!9;UBERON:0009663!1.78e-27!7;UBERON:0000025!6.52e-26!194;UBERON:0002298!2.01e-24!8;UBERON:0000200!8.86e-24!6;UBERON:0000349!1.37e-20!5;UBERON:0003076!2.19e-20!15;UBERON:0003057!2.19e-20!15;UBERON:0004111!2.62e-20!241;UBERON:0004732!6.57e-19!13;UBERON:0001871!6.68e-18!7;UBERON:0000477!1.04e-16!286;UBERON:0000064!1.68e-16!219;UBERON:0000369!6.35e-16!4;UBERON:0002435!6.35e-16!4;UBERON:0000204!6.35e-16!4;UBERON:0010082!6.35e-16!4;UBERON:0004733!1.08e-15!12;UBERON:0002028!1.08e-15!12;UBERON:0007277!1.08e-15!12;UBERON:0000483!9.08e-15!309;UBERON:0000119!1.55e-14!312;UBERON:0006331!1.42e-13!3;UBERON:0001872!2.52e-13!5;UBERON:0000988!4.69e-13!3;UBERON:0002771!5.51e-13!3;UBERON:0000475!1.08e-12!365;UBERON:0001896!1.09e-12!3;UBERON:0005290!1.09e-12!3;UBERON:0010096!1.09e-12!3;UBERON:0002021!1.10e-12!5;UBERON:0005383!3.06e-12!3;UBERON:0005382!3.06e-12!3;UBERON:0001897!7.22e-10!2;UBERON:0005162!1.10e-09!2;UBERON:0000122!1.10e-09!2;UBERON:0002148!1.74e-09!2;UBERON:0009662!1.74e-09!2;UBERON:0001954!2.23e-09!2;UBERON:0003022!2.23e-09!2;UBERON:0002421!2.23e-09!2;UBERON:0002600!2.23e-09!2;UBERON:0001870!2.74e-09!2;UBERON:0001876!2.98e-09!2;UBERON:0001875!3.10e-09!2;UBERON:0006514!3.10e-09!2;UBERON:0001873!7.24e-09!2;UBERON:0010122!7.24e-09!2;UBERON:0000062!1.62e-07!511;UBERON:0002680!1.96e-07!9;UBERON:0001895!1.96e-07!9;UBERON:0010092!1.96e-07!9;UBERON:0000481!2.91e-07!347 | ||
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|short_description=p2@SHISA7 | |short_description=p2@SHISA7 | ||
}} | }} |
Latest revision as of 01:46, 20 September 2015
Short description: | p2@SHISA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHISA7_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -182bp_to_ENST00000432840_5end |
EntrezGene: | SHISA7 |
HGNC: | 35409 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.79e-15 | 2 |
erythroblast | 1.79e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 1.79e-15 | 2 |
erythroid progenitor cell | 1.79e-15 | 2 |
reticulocyte | 1.79e-15 | 2 |
proerythroblast | 1.79e-15 | 2 |
basophilic erythroblast | 1.79e-15 | 2 |
polychromatophilic erythroblast | 1.79e-15 | 2 |
orthochromatic erythroblast | 1.79e-15 | 2 |