FFCP PHASE1:Hg19::chr6:8652489..8652515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728655 | |EntrezGene=728655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=34232 | |HGNC=34232 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=47bp_to_NR_004855,uc003myf.2_5end | |association_with_transcript=47bp_to_NR_004855,uc003myf.2_5end | ||
|cluster_id=chr6:8652489..8652515,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_HULC_5end | |description=CAGE_peak_1_at_HULC_5end | ||
|id=chr6:8652489..8652515,+ | |id=chr6:8652489..8652515,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.23e-29!12;CL:0000417!2.23e-29!12;CL:0000668!2.23e-29!12;CL:0000414!2.23e-29!12;CL:0000412!2.23e-29!12;CL:0000182!2.23e-29!12;CL:0000223!1.62e-09!59 | |ontology_enrichment_celltype=CL:0000181!2.23e-29!12;CL:0000417!2.23e-29!12;CL:0000668!2.23e-29!12;CL:0000414!2.23e-29!12;CL:0000412!2.23e-29!12;CL:0000182!2.23e-29!12;CL:0000223!1.62e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.10e-53;12!CL:0002563;5.19e-14;4!CL:0002253;8.04e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-53,12;CL:0000223,1.09e-21,58;CL:0002563,5.37e-14,4;CL:0002253,8.04e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.99e-43;11!UBERON:0009497;3.17e-36;13!UBERON:0003104;1.86e-20;31!UBERON:0001041;1.34e-15;30!CL:0000223;7.14e-14;58 | |||
|ontology_enrichment_disease=DOID:0050619!6.99e-07!1;DOID:1357!6.99e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@HULC | |short_description=p1@HULC | ||
}} | }} |
Latest revision as of 01:41, 20 September 2015
Short description: | p1@HULC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HULC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 47bp_to_NR_004855, uc003myf.2_5end |
EntrezGene: | HULC |
HGNC: | 34232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-53 | 12 |
endodermal cell | 1.09e-21 | 58 |
intestinal epithelial cell | 5.37e-14 | 4 |
epithelial cell of large intestine | 8.04e-08 | 2 |