FFCP PHASE1:Hg19::chr6:86353534..86353595,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10492 | |EntrezGene=10492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16918 | |HGNC=16918 | ||
|TSSclassifier=strong | |||
|UniProt=F6UXX1 | |UniProt=F6UXX1 | ||
|association_with_transcript=-24bp_to_ENST00000444272_5end | |association_with_transcript=-24bp_to_ENST00000444272_5end | ||
|cluster_id=chr6:86353534..86353595,- | |||
|description=CAGE_peak_4_at_SYNCRIP_5end | |description=CAGE_peak_4_at_SYNCRIP_5end | ||
|id=chr6:86353534..86353595,- | |id=chr6:86353534..86353595,- | ||
|ontology_enrichment_celltype=CL:0000012!2.86e-13!682;CL:0000548!3.31e-13!679;CL:0000004!3.31e-13!679;CL:0000255!3.31e-13!679;CL:0002321!8.71e-13!248;CL:0002139!1.42e-12!24;CL:0000220!2.56e-12!246;CL:0000055!5.39e-11!180;CL:0000071!9.40e-10!18;CL:0002546!9.40e-10!18;CL:0000213!2.92e-09!57;CL:0000215!2.92e-09!57;CL:0000222!6.48e-09!119;CL:0000066!1.36e-08!254;CL:0000115!6.46e-08!35;CL:0000057!1.70e-07!75;CL:0000076!2.95e-07!62;CL:0000144!6.79e-07!625 | |ontology_enrichment_celltype=CL:0000012!2.86e-13!682;CL:0000548!3.31e-13!679;CL:0000004!3.31e-13!679;CL:0000255!3.31e-13!679;CL:0002321!8.71e-13!248;CL:0002139!1.42e-12!24;CL:0000220!2.56e-12!246;CL:0000055!5.39e-11!180;CL:0000071!9.40e-10!18;CL:0002546!9.40e-10!18;CL:0000213!2.92e-09!57;CL:0000215!2.92e-09!57;CL:0000222!6.48e-09!119;CL:0000066!1.36e-08!254;CL:0000115!6.46e-08!35;CL:0000057!1.70e-07!75;CL:0000076!2.95e-07!62;CL:0000144!6.79e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.40e-12;24!CL:0000071;1.05e-09;18!CL:0000115;5.03e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.28e-13,250;CL:0002139,1.42e-12,24;CL:0000071,9.37e-10,18;CL:0002546,9.37e-10,18;CL:0000213,2.52e-09,58;CL:0000215,2.52e-09,58;CL:0000222,3.32e-09,121;CL:0000066,2.11e-08,253;CL:0000115,5.84e-08,36;CL:0000057,1.83e-07,76;CL:0000076,3.89e-07,63;CL:0002078,9.68e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.05e-09;18 | |||
|ontology_enrichment_disease=DOID:14566!5.47e-19!239;DOID:162!3.75e-18!235;DOID:0050686!1.70e-12!137;DOID:0050687!1.47e-08!143;DOID:305!9.86e-08!106;DOID:8692!3.88e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.91e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.71e-19,239;DOID:162,3.91e-18,235;DOID:0050686,1.78e-12,137;DOID:0050687,1.52e-08,143;DOID:305,1.02e-07,106;DOID:8692,3.87e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001986!9.40e-10!18;UBERON:0004638!9.40e-10!18;UBERON:0004852!9.40e-10!18;UBERON:0000487!8.74e-09!22;UBERON:0000055!1.25e-08!69;UBERON:0006914!3.98e-08!25;UBERON:0004872!1.08e-07!84;UBERON:0001981!2.51e-07!60;UBERON:0007500!2.51e-07!60;UBERON:0004537!2.51e-07!60;UBERON:0006965!2.51e-07!60;UBERON:0002049!8.15e-07!79;UBERON:0007798!8.15e-07!79 | |ontology_enrichment_uberon=UBERON:0001986!9.40e-10!18;UBERON:0004638!9.40e-10!18;UBERON:0004852!9.40e-10!18;UBERON:0000487!8.74e-09!22;UBERON:0000055!1.25e-08!69;UBERON:0006914!3.98e-08!25;UBERON:0004872!1.08e-07!84;UBERON:0001981!2.51e-07!60;UBERON:0007500!2.51e-07!60;UBERON:0004537!2.51e-07!60;UBERON:0006965!2.51e-07!60;UBERON:0002049!8.15e-07!79;UBERON:0007798!8.15e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.05e-09;18!UBERON:0001986;1.05e-09;18!UBERON:0004852;1.05e-09;18!UBERON:0000487;9.21e-09;22!UBERON:0006914;4.60e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,9.37e-10,18;UBERON:0001986,9.37e-10,18;UBERON:0004852,9.37e-10,18;UBERON:0000487,8.72e-09,22;UBERON:0000055,1.01e-08,68;UBERON:0006914,3.97e-08,25;UBERON:0004872,9.72e-08,83;UBERON:0007500,2.14e-07,59;UBERON:0001981,2.14e-07,59;UBERON:0004537,2.14e-07,59;UBERON:0006965,2.14e-07,59;UBERON:0002049,7.09e-07,78;UBERON:0007798,7.09e-07,78 | |||
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| ||
|short_description=p4@SYNCRIP | |short_description=p4@SYNCRIP | ||
}} | }} |
Latest revision as of 01:33, 20 September 2015
Short description: | p4@SYNCRIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYNCRIP_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000444272_5end |
EntrezGene: | SYNCRIP |
HGNC: | 16918 |
UniProt: | F6UXX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.28e-13 | 250 |
endothelial cell of vascular tree | 1.42e-12 | 24 |
blood vessel endothelial cell | 9.37e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.37e-10 | 18 |
lining cell | 2.52e-09 | 58 |
barrier cell | 2.52e-09 | 58 |
mesodermal cell | 3.32e-09 | 121 |
epithelial cell | 2.11e-08 | 253 |
endothelial cell | 5.84e-08 | 36 |
fibroblast | 1.83e-07 | 76 |
squamous epithelial cell | 3.89e-07 | 63 |
meso-epithelial cell | 9.68e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 9.37e-10 | 18 |
endothelium | 9.37e-10 | 18 |
cardiovascular system endothelium | 9.37e-10 | 18 |
simple squamous epithelium | 8.72e-09 | 22 |
vessel | 1.01e-08 | 68 |
squamous epithelium | 3.97e-08 | 25 |
splanchnic layer of lateral plate mesoderm | 9.72e-08 | 83 |
epithelial tube open at both ends | 2.14e-07 | 59 |
blood vessel | 2.14e-07 | 59 |
blood vasculature | 2.14e-07 | 59 |
vascular cord | 2.14e-07 | 59 |
vasculature | 7.09e-07 | 78 |
vascular system | 7.09e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.71e-19 | 239 |
cancer | 3.91e-18 | 235 |
organ system cancer | 1.78e-12 | 137 |
cell type cancer | 1.52e-08 | 143 |
carcinoma | 1.02e-07 | 106 |
myeloid leukemia | 3.87e-07 | 31 |