FFCP PHASE1:Hg19::chr15:96873861..96873872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7026 | |EntrezGene=7026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7976 | |HGNC=7976 | ||
|TSSclassifier=strong | |||
|UniProt=P24468 | |UniProt=P24468 | ||
|association_with_transcript=-73bp_to_ENST00000394166_5end | |association_with_transcript=-73bp_to_ENST00000394166_5end | ||
|cluster_id=chr15:96873861..96873872,+ | |||
|description=CAGE_peak_9_at_NR2F2_5end | |description=CAGE_peak_9_at_NR2F2_5end | ||
|id=chr15:96873861..96873872,+ | |id=chr15:96873861..96873872,+ | ||
|ontology_enrichment_celltype=CL:0000222!6.26e-16!119;CL:0000220!7.13e-12!246;CL:0002321!2.25e-11!248;CL:0002139!7.95e-11!24;CL:0002078!2.53e-10!44;CL:0000115!9.13e-10!35;CL:0000055!5.20e-09!180;CL:0000071!9.64e-09!18;CL:0002546!9.64e-09!18;CL:0000213!1.39e-08!57;CL:0000215!1.39e-08!57;CL:0000066!3.36e-08!254;CL:0000183!3.50e-08!59;CL:0000057!8.59e-08!75 | |ontology_enrichment_celltype=CL:0000222!6.26e-16!119;CL:0000220!7.13e-12!246;CL:0002321!2.25e-11!248;CL:0002139!7.95e-11!24;CL:0002078!2.53e-10!44;CL:0000115!9.13e-10!35;CL:0000055!5.20e-09!180;CL:0000071!9.64e-09!18;CL:0002546!9.64e-09!18;CL:0000213!1.39e-08!57;CL:0000215!1.39e-08!57;CL:0000066!3.36e-08!254;CL:0000183!3.50e-08!59;CL:0000057!8.59e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.16e-11;24!CL:0000115;1.37e-10;36!CL:0000071;6.08e-09;18!CL:0002078;2.76e-08;45 | |ontology_enrichment_celltype_v019=CL:0002139;2.16e-11;24!CL:0000115;1.37e-10;36!CL:0000071;6.08e-09;18!CL:0002078;2.76e-08;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.54e-16,121;CL:0002078,6.85e-12,45;CL:0000115,1.31e-11,36;CL:0002139,1.62e-11,24;CL:0000213,1.91e-09,58;CL:0000215,1.91e-09,58;CL:0000071,3.51e-09,18;CL:0002546,3.51e-09,18;CL:0002321,2.31e-08,250;CL:0000057,2.55e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002546;6.08e-09;18 | |ontology_enrichment_development_v019=CL:0002546;6.08e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!7.08e-17!216;UBERON:0000475!1.28e-15!365;UBERON:0002049!4.79e-15!79;UBERON:0007798!4.79e-15!79;UBERON:0003914!1.37e-14!118;UBERON:0000119!1.93e-14!312;UBERON:0000477!5.37e-14!286;UBERON:0000481!1.53e-13!347;UBERON:0000483!2.63e-13!309;UBERON:0004111!3.73e-13!241;UBERON:0000490!1.03e-12!138;UBERON:0000055!2.60e-12!69;UBERON:0003104!7.47e-12!238;UBERON:0009142!7.47e-12!238;UBERON:0004872!4.17e-11!84;UBERON:0009569!4.63e-11!113;UBERON:0005256!1.37e-10!143;UBERON:0001981!5.34e-10!60;UBERON:0007500!5.34e-10!60;UBERON:0004537!5.34e-10!60;UBERON:0006965!5.34e-10!60;UBERON:0000025!1.76e-09!194;UBERON:0001986!9.64e-09!18;UBERON:0004638!9.64e-09!18;UBERON:0004852!9.64e-09!18;UBERON:0000466!1.33e-08!126;UBERON:0000468!1.96e-08!659;UBERON:0004535!2.56e-08!110;UBERON:0001009!3.75e-08!113;UBERON:0000464!4.99e-08!104;UBERON:0000487!7.18e-08!22;UBERON:0006914!1.93e-07!25;UBERON:0002417!2.12e-07!61;UBERON:0000916!2.12e-07!61;UBERON:0005177!2.68e-07!107;UBERON:0003103!2.81e-07!69;UBERON:0004923!3.15e-07!57;UBERON:0000489!4.02e-07!32;UBERON:0002113!4.70e-07!27;UBERON:0003918!4.70e-07!27;UBERON:0005095!4.70e-07!27;UBERON:0007687!4.70e-07!27;UBERON:0002553!5.52e-07!70;UBERON:0003887!5.61e-07!21;UBERON:0003886!7.87e-07!63 | |ontology_enrichment_uberon=UBERON:0002100!7.08e-17!216;UBERON:0000475!1.28e-15!365;UBERON:0002049!4.79e-15!79;UBERON:0007798!4.79e-15!79;UBERON:0003914!1.37e-14!118;UBERON:0000119!1.93e-14!312;UBERON:0000477!5.37e-14!286;UBERON:0000481!1.53e-13!347;UBERON:0000483!2.63e-13!309;UBERON:0004111!3.73e-13!241;UBERON:0000490!1.03e-12!138;UBERON:0000055!2.60e-12!69;UBERON:0003104!7.47e-12!238;UBERON:0009142!7.47e-12!238;UBERON:0004872!4.17e-11!84;UBERON:0009569!4.63e-11!113;UBERON:0005256!1.37e-10!143;UBERON:0001981!5.34e-10!60;UBERON:0007500!5.34e-10!60;UBERON:0004537!5.34e-10!60;UBERON:0006965!5.34e-10!60;UBERON:0000025!1.76e-09!194;UBERON:0001986!9.64e-09!18;UBERON:0004638!9.64e-09!18;UBERON:0004852!9.64e-09!18;UBERON:0000466!1.33e-08!126;UBERON:0000468!1.96e-08!659;UBERON:0004535!2.56e-08!110;UBERON:0001009!3.75e-08!113;UBERON:0000464!4.99e-08!104;UBERON:0000487!7.18e-08!22;UBERON:0006914!1.93e-07!25;UBERON:0002417!2.12e-07!61;UBERON:0000916!2.12e-07!61;UBERON:0005177!2.68e-07!107;UBERON:0003103!2.81e-07!69;UBERON:0004923!3.15e-07!57;UBERON:0000489!4.02e-07!32;UBERON:0002113!4.70e-07!27;UBERON:0003918!4.70e-07!27;UBERON:0005095!4.70e-07!27;UBERON:0007687!4.70e-07!27;UBERON:0002553!5.52e-07!70;UBERON:0003887!5.61e-07!21;UBERON:0003886!7.87e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0000490;4.58e-09;33!UBERON:0004638;6.08e-09;18!UBERON:0001986;6.08e-09;18!UBERON:0004852;6.08e-09;18!UBERON:0000487;2.74e-08;22!UBERON:0000055;2.13e-07;65!UBERON:0006914;2.72e-07;25!UBERON:0002113;4.80e-07;24!UBERON:0011143;4.80e-07;24!UBERON:0003914;8.50e-07;74!UBERON:0002049;9.62e-07;75!UBERON:0007798;9.62e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0000490;4.58e-09;33!UBERON:0004638;6.08e-09;18!UBERON:0001986;6.08e-09;18!UBERON:0004852;6.08e-09;18!UBERON:0000487;2.74e-08;22!UBERON:0000055;2.13e-07;65!UBERON:0006914;2.72e-07;25!UBERON:0002113;4.80e-07;24!UBERON:0011143;4.80e-07;24!UBERON:0003914;8.50e-07;74!UBERON:0002049;9.62e-07;75!UBERON:0007798;9.62e-07;75 | ||
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| ||
|short_description=p9@NR2F2 | |short_description=p9@NR2F2 | ||
}} | }} |
Latest revision as of 01:13, 20 September 2015
Short description: | p9@NR2F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NR2F2_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_ENST00000394166_5end |
EntrezGene: | NR2F2 |
HGNC: | 7976 |
UniProt: | P24468 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.54e-16 | 121 |
meso-epithelial cell | 6.85e-12 | 45 |
endothelial cell | 1.31e-11 | 36 |
endothelial cell of vascular tree | 1.62e-11 | 24 |
lining cell | 1.91e-09 | 58 |
barrier cell | 1.91e-09 | 58 |
blood vessel endothelial cell | 3.51e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.51e-09 | 18 |
embryonic cell | 2.31e-08 | 250 |
fibroblast | 2.55e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
vasculature | 8.87e-15 | 78 |
vascular system | 8.87e-15 | 78 |
trunk | 9.67e-14 | 199 |
epithelial tube | 1.82e-12 | 117 |
vessel | 4.23e-12 | 68 |
mesenchyme | 6.82e-11 | 160 |
entire embryonic mesenchyme | 6.82e-11 | 160 |
subdivision of trunk | 9.05e-11 | 112 |
splanchnic layer of lateral plate mesoderm | 1.33e-10 | 83 |
unilaminar epithelium | 2.68e-10 | 148 |
epithelial tube open at both ends | 1.92e-09 | 59 |
blood vessel | 1.92e-09 | 59 |
blood vasculature | 1.92e-09 | 59 |
vascular cord | 1.92e-09 | 59 |
cardiovascular system | 2.72e-09 | 109 |
blood vessel endothelium | 3.51e-09 | 18 |
endothelium | 3.51e-09 | 18 |
cardiovascular system endothelium | 3.51e-09 | 18 |
cell layer | 6.42e-09 | 309 |
circulatory system | 9.73e-09 | 112 |
simple squamous epithelium | 1.72e-08 | 22 |
anatomical conduit | 2.44e-08 | 240 |
epithelium | 5.36e-08 | 306 |
squamous epithelium | 1.63e-07 | 25 |
kidney | 2.73e-07 | 26 |
kidney mesenchyme | 2.73e-07 | 26 |
upper urinary tract | 2.73e-07 | 26 |
kidney rudiment | 2.73e-07 | 26 |
kidney field | 2.73e-07 | 26 |
cavitated compound organ | 5.15e-07 | 31 |
epithelial vesicle | 5.65e-07 | 78 |
trunk mesenchyme | 9.92e-07 | 122 |