FFCP PHASE1:Hg19::chr5:12574944..12574973,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404663 | |EntrezGene=404663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000505196,ENST00000505877,ENST00000513051,NR_033383,uc003jfb.1,uc010itv.1_5end | |association_with_transcript=0bp_to_ENST00000505196,ENST00000505877,ENST00000513051,NR_033383,uc003jfb.1,uc010itv.1_5end | ||
|cluster_id=chr5:12574944..12574973,+ | |||
|description=CAGE_peak_1_at_TAG_5end | |description=CAGE_peak_1_at_TAG_5end | ||
|id=chr5:12574944..12574973,+ | |id=chr5:12574944..12574973,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.75e-23!7;CL:0000586!2.75e-23!7;CL:0002541!4.74e-11!3;CL:1000415!2.22e-08!2;CL:0000159!2.96e-08!2 | |ontology_enrichment_celltype=CL:0000039!2.75e-23!7;CL:0000586!2.75e-23!7;CL:0002541!4.74e-11!3;CL:1000415!2.22e-08!2;CL:0000159!2.96e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.24e-18;7!CL:0000586;5.24e-18;7!CL:1000415;1.76e-11;2!CL:0000159;2.11e-11;2!CL:0002541;9.72e-08;3!CL:0000319;7.35e-07;1 | |ontology_enrichment_celltype_v019=CL:0000039;5.24e-18;7!CL:0000586;5.24e-18;7!CL:1000415;1.76e-11;2!CL:0000159;2.11e-11;2!CL:0002541;9.72e-08;3!CL:0000319;7.35e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.24e-18,7;CL:0000586,5.24e-18,7;CL:1000415,1.42e-11,2;CL:0000159,2.17e-11,2;CL:0002541,9.72e-08,3;CL:0000319,7.35e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!6.50e-21!235;DOID:14566!2.95e-20!239;DOID:0050687!9.95e-20!143;DOID:305!4.00e-17!106;DOID:3095!3.90e-11!22;DOID:2994!3.90e-11!22;DOID:0050686!1.91e-09!137;DOID:299!1.11e-07!25;DOID:1036!1.57e-07!8;DOID:0050615!2.27e-07!16 | |ontology_enrichment_disease=DOID:162!6.50e-21!235;DOID:14566!2.95e-20!239;DOID:0050687!9.95e-20!143;DOID:305!4.00e-17!106;DOID:3095!3.90e-11!22;DOID:2994!3.90e-11!22;DOID:0050686!1.91e-09!137;DOID:299!1.11e-07!25;DOID:1036!1.57e-07!8;DOID:0050615!2.27e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.04e-10;8!DOID:0050615;6.66e-08;16!DOID:3095;6.80e-08;22!DOID:2994;6.80e-08;22!DOID:305;2.50e-07;106!DOID:1325;2.81e-07;7!DOID:3904;2.81e-07;7!DOID:3030;7.35e-07;1!DOID:299;7.41e-07;25!DOID:0060085;8.43e-07;1!DOID:3165;8.43e-07;1!DOID:0060121;8.43e-07;1!DOID:2438;8.43e-07;1!DOID:4418;8.43e-07;1 | |ontology_enrichment_disease_v019=DOID:1036;1.04e-10;8!DOID:0050615;6.66e-08;16!DOID:3095;6.80e-08;22!DOID:2994;6.80e-08;22!DOID:305;2.50e-07;106!DOID:1325;2.81e-07;7!DOID:3904;2.81e-07;7!DOID:3030;7.35e-07;1!DOID:299;7.41e-07;25!DOID:0060085;8.43e-07;1!DOID:3165;8.43e-07;1!DOID:0060121;8.43e-07;1!DOID:2438;8.43e-07;1!DOID:4418;8.43e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.82e-17,235;DOID:14566,5.78e-17,239;DOID:0050687,1.42e-15,143;DOID:305,1.92e-13,106;DOID:1036,9.16e-11,8;DOID:0050686,3.75e-08,137;DOID:3095,6.80e-08,22;DOID:2994,6.80e-08,22;DOID:0050615,7.29e-08,16;DOID:1325,2.94e-07,7;DOID:3904,2.94e-07,7;DOID:3030,7.35e-07,1;DOID:299,7.41e-07,25;DOID:0060085,8.67e-07,1;DOID:3165,8.67e-07,1;DOID:0060121,8.67e-07,1;DOID:2438,8.67e-07,1;DOID:4418,8.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.82e-14!8;UBERON:0000476!4.74e-11!3;UBERON:0000920!4.74e-11!3;UBERON:0003135!2.38e-10!11;UBERON:0003124!3.58e-08!7;UBERON:0000991!7.15e-07!21;UBERON:0009196!7.15e-07!21;UBERON:0009117!7.15e-07!21;UBERON:0005564!7.15e-07!21 | |ontology_enrichment_uberon=UBERON:0000473!1.82e-14!8;UBERON:0000476!4.74e-11!3;UBERON:0000920!4.74e-11!3;UBERON:0003135!2.38e-10!11;UBERON:0003124!3.58e-08!7;UBERON:0000991!7.15e-07!21;UBERON:0009196!7.15e-07!21;UBERON:0009117!7.15e-07!21;UBERON:0005564!7.15e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;6.21e-08;3!UBERON:0003124;9.72e-08;3!UBERON:0000920;9.72e-08;3!UBERON:0002294;2.29e-07;7!UBERON:0001173;2.29e-07;7!UBERON:0001282;8.43e-07;1!UBERON:0009842;8.43e-07;1!UBERON:0003704;8.43e-07;1!UBERON:0001171;8.43e-07;1!UBERON:0001172;8.43e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002110;6.21e-08;3!UBERON:0003124;9.72e-08;3!UBERON:0000920;9.72e-08;3!UBERON:0002294;2.29e-07;7!UBERON:0001173;2.29e-07;7!UBERON:0001282;8.43e-07;1!UBERON:0009842;8.43e-07;1!UBERON:0003704;8.43e-07;1!UBERON:0001171;8.43e-07;1!UBERON:0001172;8.43e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,5.41e-08,3;UBERON:0006242,5.41e-08,3;UBERON:0000920,9.72e-08,3;UBERON:0003124,4.23e-07,7;UBERON:0001282,9.15e-07,1;UBERON:0009842,9.15e-07,1;UBERON:0003704,9.15e-07,1;UBERON:0001171,9.15e-07,1;UBERON:0001172,9.15e-07,1 | |||
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| ||
|short_description=p1@TAG | |short_description=p1@TAG | ||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p1@TAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TAG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505196, ENST00000505877, ENST00000513051, NR_033383, uc003jfb.1, uc010itv.1_5end |
EntrezGene: | TAG |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.24e-18 | 7 |
germ cell | 5.24e-18 | 7 |
epithelial cell of gall bladder | 1.42e-11 | 2 |
seromucus secreting cell | 2.17e-11 | 2 |
chorionic membrane mesenchymal stem cell | 9.72e-08 | 3 |
mucus secreting cell | 7.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 5.41e-08 | 3 |
gall bladder primordium | 5.41e-08 | 3 |
egg chorion | 9.72e-08 | 3 |
chorion | 4.23e-07 | 7 |
intralobular bile duct | 9.15e-07 | 1 |
acinus | 9.15e-07 | 1 |
intrahepatic bile duct | 9.15e-07 | 1 |
portal lobule | 9.15e-07 | 1 |
hepatic acinus | 9.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.82e-17 | 235 |
disease of cellular proliferation | 5.78e-17 | 239 |
cell type cancer | 1.42e-15 | 143 |
carcinoma | 1.92e-13 | 106 |
chronic leukemia | 9.16e-11 | 8 |
organ system cancer | 3.75e-08 | 137 |
germ cell and embryonal cancer | 6.80e-08 | 22 |
germ cell cancer | 6.80e-08 | 22 |
respiratory system cancer | 7.29e-08 | 16 |
bronchus cancer | 2.94e-07 | 7 |
bronchogenic carcinoma | 2.94e-07 | 7 |
mucinous adenocarcinoma | 7.35e-07 | 1 |
adenocarcinoma | 7.41e-07 | 25 |
organ system benign neoplasm | 8.67e-07 | 1 |
skin benign neoplasm | 8.67e-07 | 1 |
integumentary system benign neoplasm | 8.67e-07 | 1 |
dermis tumor | 8.67e-07 | 1 |
cutaneous fibrous histiocytoma | 8.67e-07 | 1 |