FFCP PHASE1:Hg19::chr6:85474198..85474212,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9096 | |EntrezGene=9096 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11595 | |HGNC=11595 | ||
|TSSclassifier=strong | |||
|UniProt=O95935 | |UniProt=O95935 | ||
|association_with_transcript=24bp_to_ENST00000369663_5end | |association_with_transcript=24bp_to_ENST00000369663_5end | ||
|cluster_id=chr6:85474198..85474212,- | |||
|description=CAGE_peak_3_at_TBX18_5end | |description=CAGE_peak_3_at_TBX18_5end | ||
|id=chr6:85474198..85474212,- | |id=chr6:85474198..85474212,- | ||
|ontology_enrichment_celltype=CL:0000055!9.74e-18!180;CL:0002620!2.00e-17!23;CL:0000057!6.04e-17!75;CL:0002551!1.69e-07!6;CL:0000499!4.96e-07!27 | |ontology_enrichment_celltype=CL:0000055!9.74e-18!180;CL:0002620!2.00e-17!23;CL:0000057!6.04e-17!75;CL:0002551!1.69e-07!6;CL:0000499!4.96e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002551;1.38e-19;6!CL:0002620;2.26e-18;23!CL:0000327;5.72e-12;15!CL:0000708;5.22e-10;3!CL:0000153;2.19e-08;9!CL:0000447;2.19e-08;9!CL:0002549;1.56e-07;2!CL:0002602;1.80e-07;2!CL:0000499;2.50e-07;28!CL:0002494;9.75e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,2.26e-19,6;CL:0002620,3.20e-18,23;CL:0000327,5.41e-12,15;CL:0000708,3.76e-10,3;CL:0000153,2.45e-08,9;CL:0000447,2.45e-08,9;CL:0000057,2.73e-08,76;CL:0002549,1.33e-07,2;CL:0002602,1.84e-07,2;CL:0000499,2.57e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!4.18e-09!45;UBERON:0002416!4.18e-09!45;UBERON:0002097!1.17e-08!40;UBERON:0000948!1.78e-07!24;UBERON:0005498!1.78e-07!24;UBERON:0004140!1.78e-07!24;UBERON:0009881!1.78e-07!24;UBERON:0004141!1.78e-07!24;UBERON:0003084!1.78e-07!24;UBERON:0007005!1.78e-07!24;UBERON:0004139!1.78e-07!24;UBERON:0004291!1.78e-07!24 | |ontology_enrichment_uberon=UBERON:0002199!4.18e-09!45;UBERON:0002416!4.18e-09!45;UBERON:0002097!1.17e-08!40;UBERON:0000948!1.78e-07!24;UBERON:0005498!1.78e-07!24;UBERON:0004140!1.78e-07!24;UBERON:0009881!1.78e-07!24;UBERON:0004141!1.78e-07!24;UBERON:0003084!1.78e-07!24;UBERON:0007005!1.78e-07!24;UBERON:0004139!1.78e-07!24;UBERON:0004291!1.78e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;4.13e-14;8!UBERON:0000982;4.13e-14;8!UBERON:0004770;4.13e-14;8!UBERON:0002067;8.12e-13;9!UBERON:0011135;9.72e-11;5!UBERON:0002216;9.72e-11;5!UBERON:0011134;9.72e-11;5!UBERON:0002209;9.72e-11;5!UBERON:0002213;9.72e-11;5!UBERON:0007844;9.72e-11;5!UBERON:0011138;9.72e-11;5!UBERON:0001130;9.72e-11;5!UBERON:0001066;9.72e-11;5!UBERON:0001468;9.72e-11;5!UBERON:0005284;1.13e-10;5!UBERON:0003210;5.22e-10;3!UBERON:0002199;5.85e-09;46!UBERON:0002416;5.85e-09;46!UBERON:0004765;1.96e-08;26!UBERON:0002097;6.86e-08;41!UBERON:0005629;1.56e-07;2!UBERON:0005358;1.56e-07;2!UBERON:0001886;1.56e-07;2!UBERON:0004086;1.56e-07;2!UBERON:0005282;1.56e-07;2!UBERON:0005281;1.56e-07;2!UBERON:0006444;1.80e-07;2!UBERON:0001995;1.80e-07;2!UBERON:0004715;1.80e-07;2!UBERON:0003102;6.05e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,6.96e-14,8;UBERON:0000982,6.96e-14,8;UBERON:0004770,6.96e-14,8;UBERON:0002067,1.12e-12,9;UBERON:0004016,1.12e-12,9;UBERON:0010083,1.12e-12,9;UBERON:0005284,8.07e-11,5;UBERON:0002199,9.00e-11,46;UBERON:0002416,9.00e-11,46;UBERON:0002097,9.90e-11,41;UBERON:0011135,1.48e-10,5;UBERON:0002216,1.48e-10,5;UBERON:0011134,1.48e-10,5;UBERON:0002209,1.48e-10,5;UBERON:0002213,1.48e-10,5;UBERON:0005856,1.48e-10,5;UBERON:0005866,1.48e-10,5;UBERON:0005863,1.48e-10,5;UBERON:0007844,1.48e-10,5;UBERON:0011138,1.48e-10,5;UBERON:0001130,1.48e-10,5;UBERON:0001066,1.48e-10,5;UBERON:0001468,1.48e-10,5;UBERON:0003210,3.76e-10,3;UBERON:0005629,1.33e-07,2;UBERON:0005358,1.33e-07,2;UBERON:0001886,1.33e-07,2;UBERON:0004086,1.33e-07,2;UBERON:0005282,1.33e-07,2;UBERON:0005281,1.33e-07,2;UBERON:0006444,1.84e-07,2;UBERON:0001995,1.84e-07,2;UBERON:0004715,1.84e-07,2 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0,0,0,0,0,1.26343974685366,0,0,0,0.218441372130172,0,3.21792517696121,1.32558950291166,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,4.02420515822182,0.639312809217652,0.722878304769133,1.00267582127178,1.73815822752988,0.795285947051099,1.45990461090791,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0.56530794192401,1.25849830862972,0.550236083880135,0,0,0,0,0.402829317109147,0,0.976248230192678,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.397227542439656,0,0,1.68203280042692,1.06748995729705,0,2.8008993185979,0.404132016209064,0.326923806226917,1.51357427644931,4.03323147135999,0.234321431833797,1.24864030732128,1.1409436430889,2.24173020827702,5.87172493218824,5.50368010851647,3.08991774744947,0.61246251376468,0,0.206651562351531,0,0,0,0,0.505008341862199,0.250237039743928,0,0,0,0,0.113432183160021,7.89314397030993,2.98980344345994,1.05965950579781,0,0.309157587715317,2.31876486041066,0.558350568994769,0.506328996723799,0.194874010322397,5.3011092591264,0.552299391853796,3.39456719319505,0.355009592516614,0.302256294682921,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.70445216541493,1.87676382089396,0.462985512576611,1.33177906564219,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.205654985406647,0,0,1.45770409648969,2.61576041299968,1.68678057388185,0.129271715757778,3.57656445851882,1.690605505112,0,0,0.257207374262142,0,0,0,0,0.823240336780769,0.65147236858747,0,0,0.602878754119172,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,6.25726607767613,1.00034104211935,0,0,0,0.157702415033935,0,0,2.27407504055985,0,0.664225598535437,0,1.12948698808508,0.391602314925481,0.686286847621712,0,0,0,0.909382714338778,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28923662045859,1.48517099857058,0,0,0,0.870036464629098,0.308097234229289,0.460511024178389,0.551346289938122,2.79292636657511,3.0453505721988,0.596586391912706,0.267096106940212,0,0,0,0,0,0.62962469366128,0,1.23213432070436,0,0,0,0,3.72158369359667,1.58189712359363,0.762520775695299,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.707027159768564,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,1.05553817648832,2.96365403663912,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.71623345421307,0,0.614321404198464,0,0,0.111308705022906,0,0.211125408127993,1.79323189425963,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.87754158861589,0,0,0.230850775511391,0.227884111694002,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,0,0,0,1.89559738885464,1.05226393590145,1.03688191397247,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0.686379991447858,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0,1.67569440763353,0.458320848023367,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0.122026264901963,0,0,0.221858103073705,0.496771223531068,0.138348634936231,0,0,0,0.235265819698172,0,0,0.447764408660622,0,0,0.378806010550178,1.0062716070103,1.77962244319307,0,0.453692771289717,1.24349760466224,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.673498977531838,0,0,5.14659819299822,0.521988583930423,0,0.694567422971502,0.244736704506468,0.179088841081487,0,0.219284049578707,0.176689145945881,0.578742114812744,0,0,0.345430341731199,0,0,0,0,0,2.29326894192489,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,1.07824811396682,0.157265941855896,0,0,0.425149840203366,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,2.85538840518309,0.0981477185010256,0,0,0,0,0.690359926060101,9.94581110581374,0.150420656698515,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0.548257766857182,0.992422356778588,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.203909198930495,0.131545547125698,0,0,0.39246546425257,0,0,0,0,0,0.142953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| ||
|short_description=p3@TBX18 | |short_description=p3@TBX18 | ||
}} | }} |
Latest revision as of 00:55, 20 September 2015
Short description: | p3@TBX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBX18_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000369663_5end |
EntrezGene: | TBX18 |
HGNC: | 11595 |
UniProt: | O95935 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 2.26e-19 | 6 |
skin fibroblast | 3.20e-18 | 23 |
extracellular matrix secreting cell | 5.41e-12 | 15 |
leptomeningeal cell | 3.76e-10 | 3 |
GAG secreting cell | 2.45e-08 | 9 |
carbohydrate secreting cell | 2.45e-08 | 9 |
fibroblast | 2.73e-08 | 76 |
fibroblast of choroid plexus | 1.33e-07 | 2 |
annulus pulposus cell | 1.84e-07 | 2 |
stromal cell | 2.57e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
articulation | 6.96e-14 | 8 |
skeletal joint | 6.96e-14 | 8 |
articular system | 6.96e-14 | 8 |
dermis | 1.12e-12 | 9 |
dermatome | 1.12e-12 | 9 |
future dermis | 1.12e-12 | 9 |
brain vasculature | 8.07e-11 | 5 |
integument | 9.00e-11 | 46 |
integumental system | 9.00e-11 | 46 |
skin of body | 9.90e-11 | 41 |
intervertebral cartilage | 1.48e-10 | 5 |
symphysis | 1.48e-10 | 5 |
nonsynovial joint | 1.48e-10 | 5 |
fibrous joint | 1.48e-10 | 5 |
cartilaginous joint | 1.48e-10 | 5 |
developing mesenchymal condensation | 1.48e-10 | 5 |
pre-cartilage condensation | 1.48e-10 | 5 |
cartilaginous condensation | 1.48e-10 | 5 |
cartilage element | 1.48e-10 | 5 |
post-cranial axial skeletal system | 1.48e-10 | 5 |
vertebral column | 1.48e-10 | 5 |
intervertebral disk | 1.48e-10 | 5 |
intervertebral joint | 1.48e-10 | 5 |
blood-cerebrospinal fluid barrier | 3.76e-10 | 3 |
vascular plexus | 1.33e-07 | 2 |
ventricle of nervous system | 1.33e-07 | 2 |
choroid plexus | 1.33e-07 | 2 |
brain ventricle | 1.33e-07 | 2 |
ventricular system of brain | 1.33e-07 | 2 |
ventricular system of central nervous system | 1.33e-07 | 2 |
annulus fibrosus | 1.84e-07 | 2 |
fibrocartilage | 1.84e-07 | 2 |
annulus fibrosus disci intervertebralis | 1.84e-07 | 2 |