FFCP PHASE1:Hg19::chr15:95870121..95870167,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400456 | |EntrezGene=400456 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=161bp_to_ENST00000508732,NR_034095,uc002btm.2_5end | |association_with_transcript=161bp_to_ENST00000508732,NR_034095,uc002btm.2_5end | ||
|cluster_id=chr15:95870121..95870167,- | |||
|description=CAGE_peak_1_at_LOC400456_5end | |description=CAGE_peak_1_at_LOC400456_5end | ||
|id=chr15:95870121..95870167,- | |id=chr15:95870121..95870167,- | ||
|ontology_enrichment_celltype=CL:0002139!1.82e-17!24;CL:0000115!5.06e-13!35;CL:0000071!9.10e-12!18;CL:0002546!9.10e-12!18;CL:0002078!3.12e-10!44;CL:0005020!1.57e-07!6;CL:0002138!1.57e-07!6;CL:0005022!1.57e-07!6;CL:0002543!4.86e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.82e-17!24;CL:0000115!5.06e-13!35;CL:0000071!9.10e-12!18;CL:0002546!9.10e-12!18;CL:0002078!3.12e-10!44;CL:0005020!1.57e-07!6;CL:0002138!1.57e-07!6;CL:0005022!1.57e-07!6;CL:0002543!4.86e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.34e-21;24!CL:0000115;1.53e-14;36!CL:0000071;4.12e-12;18!CL:0002138;2.18e-11;6!CL:0002543;2.04e-10;6!CL:0002078;2.24e-09;45!CL:0000213;5.64e-07;58!CL:0000215;5.64e-07;58!CL:0002144;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.69e-21,24;CL:0000115,1.72e-18,36;CL:0002078,1.80e-13,45;CL:0000071,3.78e-12,18;CL:0002546,3.78e-12,18;CL:0005020,1.91e-11,6;CL:0002138,1.91e-11,6;CL:0005022,1.91e-11,6;CL:0002543,1.23e-10,6;CL:0000213,3.55e-10,58;CL:0000215,3.55e-10,58;CL:0002144,7.46e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.12e-12;18!CL:0005022;2.18e-11;6!UBERON:0006601;1.13e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;4.18e-28;22!UBERON:0001950;6.00e-25;20!UBERON:0000956;4.20e-24;25!UBERON:0000203;4.20e-24;25!UBERON:0001869;9.80e-22;32!UBERON:0003528;1.13e-21;34!UBERON:0002020;1.13e-21;34!UBERON:0001893;1.68e-19;34!UBERON:0002791;2.22e-19;32!UBERON:0000073;2.69e-18;53!UBERON:0002616;2.69e-18;53!UBERON:0002780;7.53e-18;41!UBERON:0001890;7.53e-18;41!UBERON:0000955;9.34e-15;68!UBERON:0001017;1.16e-14;75!UBERON:0007023;2.55e-13;114!UBERON:0001016;1.74e-12;83!UBERON:0004638;4.12e-12;18!UBERON:0001986;4.12e-12;18!UBERON:0004852;4.12e-12;18!UBERON:0000200;4.64e-12;6!UBERON:0000487;3.83e-11;22!UBERON:0002298;3.22e-10;6!UBERON:0000349;4.33e-10;5!UBERON:0006914;2.15e-09;25!UBERON:0001872;3.06e-09;5!UBERON:0001638;1.10e-08;9!UBERON:0003920;1.10e-08;9!UBERON:0004582;1.10e-08;9!UBERON:0001473;2.80e-08;8!UBERON:0004536;2.80e-08;8!UBERON:0006558;2.80e-08;8!UBERON:0004733;4.70e-08;12!UBERON:0002028;4.70e-08;12!UBERON:0004732;2.59e-07;13!UBERON:0001871;3.09e-07;6!UBERON:0005904;4.61e-07;4!UBERON:0001870;5.43e-07;3!UBERON:0010523;7.92e-07;3!UBERON:0001915;7.92e-07;3!UBERON:0001982;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.33e-45,114;UBERON:0001049,1.78e-35,56;UBERON:0005068,1.78e-35,56;UBERON:0006241,1.78e-35,56;UBERON:0007135,1.78e-35,56;UBERON:0001017,1.55e-32,81;UBERON:0000073,5.13e-32,53;UBERON:0002616,5.13e-32,53;UBERON:0000955,7.66e-32,68;UBERON:0006238,7.66e-32,68;UBERON:0001016,2.22e-29,89;UBERON:0002619,4.40e-28,22;UBERON:0004111,2.87e-26,240;UBERON:0002780,3.65e-25,41;UBERON:0001890,3.65e-25,41;UBERON:0003080,3.65e-25,41;UBERON:0006240,3.65e-25,41;UBERON:0001950,6.34e-25,20;UBERON:0003075,1.54e-24,82;UBERON:0007284,1.54e-24,82;UBERON:0003528,1.84e-24,34;UBERON:0002020,1.84e-24,34;UBERON:0002346,3.31e-24,86;UBERON:0000956,4.39e-24,25;UBERON:0000203,4.39e-24,25;UBERON:0001869,4.44e-24,32;UBERON:0001893,2.83e-22,34;UBERON:0000025,4.40e-22,192;UBERON:0002791,1.06e-21,32;UBERON:0010371,8.31e-17,104;UBERON:0010314,9.32e-17,132;UBERON:0003056,1.51e-15,61;UBERON:0004121,4.46e-14,171;UBERON:0000924,4.46e-14,171;UBERON:0006601,4.46e-14,171;UBERON:0011216,5.17e-13,223;UBERON:0004638,3.78e-12,18;UBERON:0001986,3.78e-12,18;UBERON:0004852,3.78e-12,18;UBERON:0000200,4.86e-12,6;UBERON:0003076,2.44e-11,15;UBERON:0003057,2.44e-11,15;UBERON:0000487,3.48e-11,22;UBERON:0000119,9.68e-11,309;UBERON:0000483,1.79e-10,306;UBERON:0002298,2.84e-10,6;UBERON:0000349,4.57e-10,5;UBERON:0006914,1.98e-09,25;UBERON:0001872,4.91e-09,5;UBERON:0001638,8.73e-09,9;UBERON:0003920,8.73e-09,9;UBERON:0004582,8.73e-09,9;UBERON:0001473,2.54e-08,8;UBERON:0004536,2.54e-08,8;UBERON:0006558,2.54e-08,8;UBERON:0004876,2.68e-08,11;UBERON:0004733,5.07e-08,12;UBERON:0002028,5.07e-08,12;UBERON:0007277,5.07e-08,12;UBERON:0002049,5.82e-08,78;UBERON:0007798,5.82e-08,78;UBERON:0000055,1.30e-07,68;UBERON:0003887,1.82e-07,12;UBERON:0005423,2.08e-07,581;UBERON:0004732,2.77e-07,13;UBERON:0000922,3.01e-07,592;UBERON:0001871,3.27e-07,6;UBERON:0005904,3.96e-07,4;UBERON:0001870,5.52e-07,3;UBERON:0010523,7.46e-07,3;UBERON:0001915,7.46e-07,3;UBERON:0001982,7.46e-07,3;UBERON:0000489,8.30e-07,31 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0.443458794925128,0,1.24430121722827,0,0,0,0,0,0,0,0,3.18019851786728,0.860234595106124,0.347140501607594,1.13061588384802,0,0.275118041940067,0.208994966536811,6.97725249757188,4.62496141492723,15.3971481871748,11.2792208790561,11.4040815857777,4.88124115096339,6.25027236587977,0,9.2871717415443,5.83776368828041,6.64407734851601,1.53316637465883,3.79706263827252,1.83201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0.622422070799533,0.67355336034844,0.326923806226917,1.36221684880438,1.15235184896,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0.558350568994769,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0.134831308160164,0,0,2.95262181849859,0,0.4115740113314,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,6.49649014924832,3.70388410061289,3.99533719692656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74384027533312,0.1466765716419,0,0,0,0.797814349754612,2.08014873822732,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,1.37060810223918,2.40200396667599,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,2.89159298970077,1.0795795805107,1.54227252690289,1.35473218771926,0,0.254876273045038,0.831076008928724,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,4.82051789532479,0.193341436584244,0.308097234229289,0,0.137836572484531,0,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,1.58189712359363,0.762520775695299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,14.9122147164945,9.14351206668333,0,0,0,1.39473591775749,0.276283915531148,0,0,0,0,0,0,0,1.28236427328014,0,0,3.87733098438087,5.93715828235848,1.99613798001194,0,0,1.44999915086959,0,0,0,0.344743373241465,0,0,1.77148277162768,0.60298219312704,4.5774520895125,0.774054819518572,1.18219047581419,7.02033270892712,0,0,3.30886111566327,0,0,0,0.108647371922008,0.957003479195758,0.366390373607449,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0.611030144933625,0,0,0,0.202203398942031,0,0.702793337176017,0,0,0,1.97292201424695,0,0.91821828489147,1.32691817219825,0.60129367765797,1.9700756365477,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.969890164884194,10.6789913296715,0.451961481561065,0,0,8.73688984191126,0.391102765469606,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,1.39641200636127,0.687481272035051,1.43574604915363,0.199679000498991,0.429226048136571,0.669514372325618,1.34366944973453,0,0,0,0,0,0,0,5.56660782866512,4.76711921390515,0.160753148465019,0,0,0,0,7.65444413891111,0,1.18208560948797,3.09482069996489,0,0,0,0.714695326373367,0.662091970365432,12.7134268827375,0,0,0,0,0,0,0,0.146552233678082,0,6.98127964352373,2.90911723833918,0,0,0.640724475406168,1.10043013569766,1.24271716604159,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,22.1517044991746,15.6193619074513,7.26107398097699,3.44045517414043,1.33114861844223,2.48385611765534,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.363697318405119,0.214821114084977,0.928067519756987,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46595555219346,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,0,5.33102568300614,2.8339315265117,0.638535436228605,3.69209455633359,1.51243017733031,1.65977405914123,8.88116050975181,0,0,0,0,0,0,0,0,6.6937192230839,0,0,0,0,0,6.68622087722107,7.02970288752463,5.58054350553197,4.56593833396129,1.09394961803644,0,2.97726707033577,2.11045493231545,0,1.60710550763486,0,9.71144966778611,14.7980424378343,0.532214220975833,0,0,4.62194184242456,4.07791196089664,0,0,1.33438257845874,0.628462359664008,0,0,0,0,1.92986669276972,0,9.88052115629065,0,0,0,0,0,0.430227358820278,0,0,2.11693525095465,0,0,0,0,0,0,0.647428837187895,0.615976841137482,0,0.971421986118279,2.33939463462106,0,2.2594817247738,0,0.109940516745429,12.6808788596006,0.0771741581079447,0.218559560503957,0,0.735444965261716,0,3.53355240806901,1.18818560130834,1.2679671827502,0,4.88716373495239,2.57831551894309,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,4.01149792126397,0.436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| ||
|short_description=p1@LOC400456 | |short_description=p1@LOC400456 | ||
}} | }} |
Latest revision as of 00:38, 20 September 2015
Short description: | p1@LOC400456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC400456_5end |
Coexpression cluster: | NA |
Association with transcript: | 161bp_to_ENST00000508732, NR_034095, uc002btm.2_5end |
EntrezGene: | LOC400456 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.69e-21 | 24 |
endothelial cell | 1.72e-18 | 36 |
meso-epithelial cell | 1.80e-13 | 45 |
blood vessel endothelial cell | 3.78e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.78e-12 | 18 |
lymphangioblast | 1.91e-11 | 6 |
endothelial cell of lymphatic vessel | 1.91e-11 | 6 |
vascular lymphangioblast | 1.91e-11 | 6 |
vein endothelial cell | 1.23e-10 | 6 |
lining cell | 3.55e-10 | 58 |
barrier cell | 3.55e-10 | 58 |
capillary endothelial cell | 7.46e-07 | 3 |