FFCP PHASE1:Hg19::chr1:204121137..204121180,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:204121137..204121180,- to FFCP PHASE1:Hg19::chr1:204121137..204121180,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55224 | |EntrezGene=55224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25575 | |HGNC=25575 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVF9 | |UniProt=Q9NVF9 | ||
|association_with_transcript=-6bp_to_ENST00000367202_5end | |||
|cluster_id=chr1:204121137..204121180,- | |||
|description=CAGE_peak_1_at_ETNK2_5end | |||
|id=chr1:204121137..204121180,- | |||
|ontology_enrichment_celltype=CL:0000066!2.40e-34!254;CL:0002321!8.85e-17!248;CL:0000220!3.25e-16!246;CL:0000223!4.17e-12!59;CL:0002076!1.55e-08!43;CL:0000076!2.16e-08!62;CL:0000221!2.26e-07!71;CL:1000449!4.50e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;5.11e-08;15!CL:0002076;6.02e-08;42!CL:1000497;4.09e-07;17!CL:0002518;4.09e-07;17!CL:0002681;5.64e-07;12!CL:0002584;5.64e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.10e-35,253;CL:0002321,2.11e-16,250;CL:0000223,3.41e-14,58;CL:0002076,1.06e-10,42;CL:0000076,2.67e-08,63;CL:1000449,5.07e-08,15;CL:1000497,3.88e-07,17;CL:0002518,3.88e-07,17;CL:0002681,6.35e-07,12;CL:0002584,6.35e-07,12;CL:0000221,6.36e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000223;2.98e-08;58 | |||
|ontology_enrichment_disease=DOID:305!2.47e-07!106;DOID:0050687!4.76e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.63e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000466!1.14e-14!126;UBERON:0005177!1.60e-14!107;UBERON:0009569!1.00e-12!113;UBERON:0000119!5.80e-12!312;UBERON:0005172!1.03e-11!55;UBERON:0005173!1.03e-11!55;UBERON:0000483!1.25e-11!309;UBERON:0004119!2.73e-11!169;UBERON:0000925!2.73e-11!169;UBERON:0006595!2.73e-11!169;UBERON:0002417!3.22e-11!61;UBERON:0000916!3.22e-11!61;UBERON:0001008!5.14e-11!45;UBERON:0006554!1.44e-10!44;UBERON:0000475!1.57e-10!365;UBERON:0005911!4.40e-10!82;UBERON:0000464!7.95e-10!104;UBERON:0003064!8.41e-10!37;UBERON:0004921!4.60e-09!129;UBERON:0004185!4.60e-09!129;UBERON:0004111!6.41e-09!241;UBERON:0000064!1.58e-08!219;UBERON:0002530!2.48e-08!59;UBERON:0001007!2.64e-08!155;UBERON:0001555!2.64e-08!155;UBERON:0007026!2.64e-08!155;UBERON:0004876!2.66e-08!20;UBERON:0002365!2.66e-08!31;UBERON:0002330!2.66e-08!31;UBERON:0000077!3.63e-08!130;UBERON:0000481!4.46e-08!347;UBERON:0000489!6.80e-08!32;UBERON:0000080!7.32e-08!18;UBERON:0002120!7.32e-08!18;UBERON:0004875!7.32e-08!18;UBERON:0005721!7.32e-08!18;UBERON:0005754!7.32e-08!18;UBERON:0007297!7.32e-08!18;UBERON:0001048!7.88e-08!168;UBERON:0000477!1.09e-07!286;UBERON:0006555!1.64e-07!17;UBERON:0005103!1.64e-07!17;UBERON:0000083!1.64e-07!17;UBERON:0009201!1.64e-07!17;UBERON:0004819!1.64e-07!17;UBERON:0006553!1.64e-07!17;UBERON:0003074!1.64e-07!17;UBERON:0003060!1.64e-07!17;UBERON:0002113!1.81e-07!27;UBERON:0003918!1.81e-07!27;UBERON:0005095!1.81e-07!27;UBERON:0007687!1.81e-07!27;UBERON:0002100!2.46e-07!216;UBERON:0005156!3.07e-07!59;UBERON:0000990!3.07e-07!59;UBERON:0004211!4.50e-07!16;UBERON:0001285!4.50e-07!16;UBERON:0007684!4.50e-07!16;UBERON:0003220!4.50e-07!16;UBERON:0004208!4.50e-07!16;UBERON:0000058!5.50e-07!26;UBERON:0002107!5.67e-07!19;UBERON:0006925!5.67e-07!19;UBERON:0008836!5.67e-07!19;UBERON:0003929!6.80e-07!54;UBERON:0000468!8.25e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;6.01e-10;30!UBERON:0001008;6.01e-10;30!UBERON:0002365;4.04e-08;31!UBERON:0002330;4.04e-08;31!UBERON:0006555;5.11e-08;15!UBERON:0004819;5.11e-08;15!UBERON:0001285;5.11e-08;15!UBERON:0007684;5.11e-08;15!UBERON:0005172;7.99e-08;52!UBERON:0005173;7.99e-08;52!UBERON:0000489;2.03e-07;29!UBERON:0002107;2.60e-07;19!UBERON:0006925;2.60e-07;19!UBERON:0000490;2.91e-07;33!UBERON:0002113;3.24e-07;24!UBERON:0011143;3.24e-07;24!UBERON:0001225;5.64e-07;12!UBERON:0008987;5.64e-07;12 | |||
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| ||
|short_description=p1@ETNK2 | |||
}} | }} |
Latest revision as of 00:26, 20 September 2015
Short description: | p1@ETNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ETNK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000367202_5end |
EntrezGene: | ETNK2 |
HGNC: | 25575 |
UniProt: | Q9NVF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.10e-35 | 253 |
embryonic cell | 2.11e-16 | 250 |
endodermal cell | 3.41e-14 | 58 |
endo-epithelial cell | 1.06e-10 | 42 |
squamous epithelial cell | 2.67e-08 | 63 |
epithelial cell of nephron | 5.07e-08 | 15 |
kidney cell | 3.88e-07 | 17 |
kidney epithelial cell | 3.88e-07 | 17 |
kidney cortical cell | 6.35e-07 | 12 |
renal cortical epithelial cell | 6.35e-07 | 12 |
ectodermal cell | 6.36e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.63e-07 | 106 |