FFCP PHASE1:Hg19::chr2:21252794..21252801,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-7bp_to_M12480_5end | |association_with_transcript=-7bp_to_M12480_5end | ||
|cluster_id=chr2:21252794..21252801,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_62_at_APOB_5end | |description=CAGE_peak_62_at_APOB_5end | ||
|id=chr2:21252794..21252801,- | |id=chr2:21252794..21252801,- | ||
|ontology_enrichment_celltype=CL:0000181!7.59e-40!12;CL:0000417!7.59e-40!12;CL:0000668!7.59e-40!12;CL:0000414!7.59e-40!12;CL:0000412!7.59e-40!12;CL:0000182!7.59e-40!12;CL:0000223!1.40e-10!59 | |ontology_enrichment_celltype=CL:0000181!7.59e-40!12;CL:0000417!7.59e-40!12;CL:0000668!7.59e-40!12;CL:0000414!7.59e-40!12;CL:0000412!7.59e-40!12;CL:0000182!7.59e-40!12;CL:0000223!1.40e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.99e-51;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.79e-51,12;CL:0000223,6.12e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.64e-56;11!UBERON:0009497;1.87e-47;13!UBERON:0001041;7.96e-21;30!UBERON:0003104;4.14e-20;31!CL:0000223;1.35e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.75e-44!19;UBERON:0006925!2.75e-44!19;UBERON:0008836!2.75e-44!19;UBERON:0008835!3.56e-38!22;UBERON:0003894!3.56e-38!22;UBERON:0009854!1.72e-36!23;UBERON:0007499!1.59e-33!25;UBERON:0009497!1.59e-33!25;UBERON:0000015!1.59e-33!25;UBERON:0002423!1.59e-33!25;UBERON:0006235!1.59e-33!25;UBERON:0004161!1.59e-33!25;UBERON:0005057!3.26e-32!26;UBERON:0009856!3.26e-32!26;UBERON:0002365!6.41e-27!31;UBERON:0002330!6.41e-27!31;UBERON:0002368!9.04e-24!35;UBERON:0003929!3.97e-19!54;UBERON:0000949!2.44e-18!45;UBERON:0005172!7.12e-15!55;UBERON:0005173!7.12e-15!55;UBERON:0002530!8.15e-14!59;UBERON:0004921!2.08e-13!129;UBERON:0004185!2.08e-13!129;UBERON:0002417!2.45e-13!61;UBERON:0000916!2.45e-13!61;UBERON:0005911!2.80e-12!82;UBERON:0001007!6.19e-11!155;UBERON:0001555!6.19e-11!155;UBERON:0007026!6.19e-11!155;UBERON:0004119!6.50e-10!169;UBERON:0000925!6.50e-10!169;UBERON:0006595!6.50e-10!169;UBERON:0001041!5.31e-08!98;UBERON:0000160!8.27e-08!27;UBERON:0000466!1.27e-07!126;UBERON:0005177!2.94e-07!107;UBERON:0000490!6.96e-07!138;UBERON:0009569!7.92e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.60e-63;19!UBERON:0006925;2.60e-63;19!UBERON:0002423;3.30e-48;25!UBERON:0002365;4.66e-37;31!UBERON:0002330;4.66e-37;31!UBERON:0002368;4.66e-33;33!UBERON:0000949;6.12e-24;43!UBERON:0005172;2.57e-14;52!UBERON:0005173;2.57e-14;52!UBERON:0002530;1.91e-13;57!UBERON:0002417;9.48e-12;58!UBERON:0000916;9.48e-12;58!UBERON:0001007;5.74e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.60e-63,19;UBERON:0006925,2.60e-63,19;UBERON:0008836,2.60e-63,19;UBERON:0008835,9.88e-55,22;UBERON:0003894,9.88e-55,22;UBERON:0009854,2.28e-52,23;UBERON:0007499,3.31e-48,25;UBERON:0009497,3.31e-48,25;UBERON:0000015,3.31e-48,25;UBERON:0002423,3.31e-48,25;UBERON:0006235,3.31e-48,25;UBERON:0004161,3.31e-48,25;UBERON:0009856,2.29e-46,26;UBERON:0002365,6.14e-39,31;UBERON:0002330,6.14e-39,31;UBERON:0002368,1.61e-34,35;UBERON:0000949,6.67e-27,45;UBERON:0003929,1.89e-22,54;UBERON:0005172,1.89e-22,54;UBERON:0005173,1.89e-22,54;UBERON:0002530,1.47e-20,59;UBERON:0002417,3.21e-20,60;UBERON:0000916,3.21e-20,60;UBERON:0005911,8.03e-15,82;UBERON:0001041,5.67e-14,87;UBERON:0004921,2.56e-13,118;UBERON:0005177,4.86e-12,101;UBERON:0009569,7.41e-11,112;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0003914,2.16e-10,117;UBERON:0005256,5.79e-10,122;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0000490,3.35e-08,148;UBERON:0001048,1.41e-07,160;UBERON:0003104,1.41e-07,160;UBERON:0009142,1.41e-07,160;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p62@APOB | |short_description=p62@APOB | ||
}} | }} |
Latest revision as of 23:56, 19 September 2015
Short description: | p62@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_62_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -7bp_to_M12480_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.79e-51 | 12 |
endodermal cell | 6.12e-11 | 58 |