FFCP PHASE1:Hg19::chr12:6644523..6644576,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2597 | |EntrezGene=2597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4141 | |HGNC=4141 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUT4 | |UniProt=E7EUT4 | ||
|association_with_transcript=55bp_to_ENST00000396858,uc001qov.1_5end | |association_with_transcript=55bp_to_ENST00000396858,uc001qov.1_5end | ||
|cluster_id=chr12:6644523..6644576,+ | |||
|description=CAGE_peak_12_at_GAPDH_5end | |description=CAGE_peak_12_at_GAPDH_5end | ||
|id=chr12:6644523..6644576,+ | |id=chr12:6644523..6644576,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.74e-16!42;CL:0000860!5.93e-16!45;CL:0000766!2.22e-13!76;CL:0000012!2.35e-13!682;CL:0000548!9.38e-13!679;CL:0000004!9.38e-13!679;CL:0000255!9.38e-13!679;CL:0002139!1.39e-11!24;CL:0000144!1.56e-11!625;CL:0000063!1.65e-11!578;CL:0002371!2.56e-11!591;CL:0002194!1.43e-10!63;CL:0000576!1.43e-10!63;CL:0000040!1.43e-10!63;CL:0000559!1.43e-10!63;CL:0000839!3.70e-10!70;CL:0000003!6.74e-10!722;CL:0002009!1.11e-09!65;CL:0000115!1.73e-09!35;CL:0000557!2.93e-09!71;CL:0000071!6.27e-09!18;CL:0002546!6.27e-09!18;CL:0000222!1.18e-08!119;CL:0002078!2.23e-08!44;CL:0000213!2.25e-08!57;CL:0000215!2.25e-08!57;CL:0000763!9.93e-08!112;CL:0000049!9.93e-08!112;CL:0000034!6.13e-07!444;CL:0000048!8.91e-07!430 | |ontology_enrichment_celltype=CL:0002057!3.74e-16!42;CL:0000860!5.93e-16!45;CL:0000766!2.22e-13!76;CL:0000012!2.35e-13!682;CL:0000548!9.38e-13!679;CL:0000004!9.38e-13!679;CL:0000255!9.38e-13!679;CL:0002139!1.39e-11!24;CL:0000144!1.56e-11!625;CL:0000063!1.65e-11!578;CL:0002371!2.56e-11!591;CL:0002194!1.43e-10!63;CL:0000576!1.43e-10!63;CL:0000040!1.43e-10!63;CL:0000559!1.43e-10!63;CL:0000839!3.70e-10!70;CL:0000003!6.74e-10!722;CL:0002009!1.11e-09!65;CL:0000115!1.73e-09!35;CL:0000557!2.93e-09!71;CL:0000071!6.27e-09!18;CL:0002546!6.27e-09!18;CL:0000222!1.18e-08!119;CL:0002078!2.23e-08!44;CL:0000213!2.25e-08!57;CL:0000215!2.25e-08!57;CL:0000763!9.93e-08!112;CL:0000049!9.93e-08!112;CL:0000034!6.13e-07!444;CL:0000048!8.91e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.65e-47;33!CL:0002057;4.65e-47;33!CL:0000473;2.78e-31;39!CL:0000234;2.78e-31;39!CL:0000576;3.59e-21;48!CL:0000766;1.88e-14;69!CL:0000115;3.10e-10;36!CL:0002139;8.27e-10;24!CL:0000071;1.83e-09;18!CL:0002078;9.07e-09;45!CL:0002144;2.59e-08;3!CL:0002188;8.22e-08;5!CL:0000094;8.47e-08;8!CL:0000763;1.88e-07;100!CL:0000213;6.14e-07;58!CL:0000215;6.14e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.03e-39,42;CL:0002057,7.03e-39,42;CL:0000473,5.97e-33,48;CL:0000234,5.97e-33,48;CL:0000766,5.41e-30,72;CL:0002194,1.35e-26,59;CL:0000576,1.35e-26,59;CL:0000040,1.35e-26,59;CL:0000559,1.35e-26,59;CL:0002009,1.84e-25,61;CL:0000839,6.32e-23,66;CL:0000557,1.83e-22,67;CL:0000763,4.08e-18,108;CL:0000049,4.08e-18,108;CL:0000115,9.27e-13,36;CL:0000738,2.25e-12,136;CL:0002078,9.57e-11,45;CL:0002087,1.01e-10,115;CL:0002031,5.82e-10,120;CL:0002032,7.46e-10,161;CL:0000837,7.46e-10,161;CL:0002139,8.84e-10,24;CL:0000037,9.04e-10,168;CL:0000071,1.91e-09,18;CL:0002546,1.91e-09,18;CL:0000988,8.13e-09,177;CL:0000213,1.65e-08,58;CL:0000215,1.65e-08,58;CL:0002144,3.02e-08,3;CL:0000094,5.72e-08,8;CL:0002188,1.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;6.13e-29;42!CL:0002546;1.83e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.02e-10!216;UBERON:0000055!6.89e-10!69;UBERON:0001986!6.27e-09!18;UBERON:0004638!6.27e-09!18;UBERON:0004852!6.27e-09!18;UBERON:0002371!2.04e-08!80;UBERON:0002049!2.05e-08!79;UBERON:0007798!2.05e-08!79;UBERON:0002193!9.63e-08!112;UBERON:0001474!1.31e-07!86;UBERON:0001981!1.60e-07!60;UBERON:0007500!1.60e-07!60;UBERON:0004537!1.60e-07!60;UBERON:0006965!1.60e-07!60;UBERON:0002204!2.30e-07!167;UBERON:0000487!2.35e-07!22;UBERON:0002405!3.49e-07!115;UBERON:0004765!4.52e-07!101;UBERON:0001434!4.52e-07!101 | |ontology_enrichment_uberon=UBERON:0003081!5.02e-10!216;UBERON:0000055!6.89e-10!69;UBERON:0001986!6.27e-09!18;UBERON:0004638!6.27e-09!18;UBERON:0004852!6.27e-09!18;UBERON:0002371!2.04e-08!80;UBERON:0002049!2.05e-08!79;UBERON:0007798!2.05e-08!79;UBERON:0002193!9.63e-08!112;UBERON:0001474!1.31e-07!86;UBERON:0001981!1.60e-07!60;UBERON:0007500!1.60e-07!60;UBERON:0004537!1.60e-07!60;UBERON:0006965!1.60e-07!60;UBERON:0002204!2.30e-07!167;UBERON:0000487!2.35e-07!22;UBERON:0002405!3.49e-07!115;UBERON:0004765!4.52e-07!101;UBERON:0001434!4.52e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.83e-09;18!UBERON:0001986;1.83e-09;18!UBERON:0004852;1.83e-09;18!UBERON:0010523;2.59e-08;3!UBERON:0001915;2.59e-08;3!UBERON:0001982;2.59e-08;3!UBERON:0000487;2.07e-07;22 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.218441372130172,0,0,0,1.34465029290355,0,0,0.975865597581014,0.246242116153576,0.612002073732759,0,0,0.136874425072884,0,0.458480434487708,0.0821005894499457,0.314843125254717,0.786728553697808,0.767658796194425,1.54816123316076,0,0.90361775633475,0.369754010166788,0.0774672005803016,0,1.17440175733939,0,0.200544447470142,0.434021741431704,0,0,0,1.59938062657521,2.26725566213286,1.4555043671269,2.32429036905685,1.6446715520873,4.95530193432166,2.58923153089935,2.0492856522328,3.31075121844019,1.72372840368309,2.5819387343353,0,3.01187743268168,2.18324920046277,0.674170453335254,2.44867113896722,2.56743221660875,1.91801137739712,1.9791078011203,1.39624560335142,1.70489900213078,3.77272010217159,2.26954089876456,4.35975574296902,4.27122730936464,4.69334626578181,2.6062661364614,3.63239701580021,4.41933163185078,2.53169909952708,0.211255286311942,0,0.209658645508376,0.786300418025466,0.750884464207532,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,2.24203425192614,0.526768169550154,0.196709770113833,0,0.411202997999018,0,0,0,0,0.445641827540694,0.294605907474837,0,0.812411591295047,0.25618263945135,0.390178042679635,0,0,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0.434539556882471,0.795285947051099,0,0,0.886917589850256,0.43917392846563,3.73290365168481,0.364295288292542,0.741568885568859,0,0,0.132957960518865,0.238490624305342,0,0,3.18019851786728,0,0.347140501607594,0.56530794192401,2.51699661725944,1.10047216776027,1.67195973229448,1.03366703667732,0.35576626268671,0.66944122552934,2.01414658554573,3.80136052859256,2.4406205754817,0.367663080345869,0.81014194788176,0.446498641420399,0.673588117878509,0.563057402416611,3.06633274931766,2.84779697870439,0.916008719652036,3.9534125230819,3.87780264148325,0.436094052142534,0,0.25326102332916,0.397227542439656,0,0,0.560677600142307,0,0.49333509683432,0,0,0.326923806226917,0,0,0,1.5608003841516,1.71141546463335,0.448346041655403,0.23486899728753,0.161872944368132,0.280901613404497,0.204154171254893,0,0.206651562351531,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0.250237039743928,0.554128230968366,0.438977620880838,0.30648779579902,0,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0.503760491138201,0.169560592310488,0.773043412653187,0.272746120590835,0.860413786167011,0,0,0.348581828608555,0.10366105501537,0.504641701751257,0,0,0,1.38134921352481,0,0,0.591534000199219,0.168584690078102,0.482022059766964,0.441175890929576,0.871517776369625,0,0.269662616320329,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0.301586917234893,0.0925884451585296,0,1.03993478527958,0,0,0.234817388471643,1.73239737313289,0.925971025153221,0.951270761172991,0,0,0,0.234004265139238,0.297262324577456,0.93733833986777,0.335964256397719,0.567100388969546,0.268675568108545,1.45316969256981,1.53353071666084,0,0.44024217006613,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,0,0,0.336393253036082,0,0.36669142910475,0.129271715757778,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0,0,0,0.977208552881205,0.355391948742546,0.791951872933429,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0.239624855491583,0,0,0.723906533337896,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,2.99602809578873,0,5.38740167466846,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.462629081407967,0.532685175939381,0.492762936082855,0.519254429183621,0.232420756919918,0,1.00253235151642,0,0,0.182091168006717,0.262248829918848,0.451199612907412,0.308061348417659,0,2.92278449306521,0.105551628892876,2.27466768141793,1.02056223165909,0.431831832204279,3.08454505380579,0,0.501689773854853,1.52925763827023,0.831076008928724,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0.330569830721956,0.576570202095319,0.255225424989168,0.4046311234222,0.464845549297286,0.31481234683064,0,1.23213432070436,1.06461206063404,0,0.37064843820784,0.858749320451947,0.372158369359667,0,0,0.255897791311334,0,0.636406495851874,0.78494864019923,0.179872457583315,0.274537029736055,0,2.22400729730648,0,0,0,0.974853958525138,0,0.409499734223957,0.424216295861138,1.13008116620243,0,0,1.75380354101505,1.73632660280006,0,0.608731130888112,0.30982349809975,0.845086807596724,0.2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| ||
|short_description=p12@GAPDH | |short_description=p12@GAPDH | ||
}} | }} |
Latest revision as of 23:53, 19 September 2015
Short description: | p12@GAPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GAPDH_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000396858, uc001qov.1_5end |
EntrezGene: | GAPDH |
HGNC: | 4141 |
UniProt: | E7EUT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.56e-20 | 76 |
bone element | 3.11e-18 | 82 |
immune system | 1.38e-17 | 93 |
lateral plate mesoderm | 5.73e-17 | 203 |
skeletal element | 6.81e-16 | 90 |
hemolymphoid system | 5.82e-14 | 108 |
hematopoietic system | 6.04e-14 | 98 |
blood island | 6.04e-14 | 98 |
skeletal system | 1.65e-13 | 100 |
mesoderm | 5.75e-12 | 315 |
mesoderm-derived structure | 5.75e-12 | 315 |
presumptive mesoderm | 5.75e-12 | 315 |
musculoskeletal system | 3.04e-10 | 167 |
blood vessel endothelium | 1.91e-09 | 18 |
endothelium | 1.91e-09 | 18 |
cardiovascular system endothelium | 1.91e-09 | 18 |
microcirculatory vessel | 3.02e-08 | 3 |
endothelium of capillary | 3.02e-08 | 3 |
capillary | 3.02e-08 | 3 |
simple squamous epithelium | 2.14e-07 | 22 |