FFCP PHASE1:Hg19::chr19:55587751..55587772,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:55587751..55587772,+ to FFCP PHASE1:Hg19::chr19:55587751..55587772,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54869 | |EntrezGene=54869 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21295 | |HGNC=21295 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_uc010esu.1_5end | |||
|cluster_id=chr19:55587751..55587772,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_3_at_EPS8L1_5end | |||
|id=chr19:55587751..55587772,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.69e-28!43;CL:0000223!1.23e-21!59;CL:0000066!4.75e-17!254;CL:0002368!3.32e-16!13;CL:0002202!9.21e-10!9;CL:0002632!9.21e-10!9;CL:0002251!2.20e-09!21;CL:0000039!1.77e-08!7;CL:0000586!1.77e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0002328;5.94e-10;3!CL:0002368;1.27e-08;13!CL:0000313;1.57e-08;1!CL:0002252;4.40e-08;1!CL:0002202;1.98e-07;9!CL:0002632;1.98e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,5.46e-10,58;CL:0002328,5.68e-10,3;CL:0002076,2.86e-09,42;CL:0002368,1.48e-08,13;CL:0000313,1.63e-08,1;CL:0002252,3.83e-08,1;CL:0002202,2.00e-07,9;CL:0002632,2.00e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.05e-08;1!UBERON:0003124;1.57e-08;1!CL:0000223;6.04e-07;58!UBERON:0005795;9.92e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.57e-08;1!DOID:1799;4.40e-08;1!DOID:10165;4.40e-08;1!DOID:1798;4.40e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.63e-08,1;DOID:1799,6.68e-08,1;DOID:10165,6.68e-08,1;DOID:1798,6.68e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.71e-14!169;UBERON:0000925!4.71e-14!169;UBERON:0006595!4.71e-14!169;UBERON:0001004!1.67e-12!72;UBERON:0005631!3.13e-12!14;UBERON:0000158!3.13e-12!14;UBERON:0007196!8.07e-10!14;UBERON:0001558!8.07e-10!14;UBERON:0000464!1.21e-09!104;UBERON:0005911!2.63e-09!82;UBERON:0000065!3.86e-09!53;UBERON:0001007!4.54e-09!155;UBERON:0001555!4.54e-09!155;UBERON:0007026!4.54e-09!155;UBERON:0000466!1.33e-08!126;UBERON:0000166!1.67e-08!21;UBERON:0000077!1.68e-08!130;UBERON:0005178!1.10e-07!34;UBERON:0002224!1.10e-07!34;UBERON:0005181!2.28e-07!35;UBERON:0000305!3.75e-07!7;UBERON:0000161!4.34e-07!35;UBERON:0000165!8.31e-07!28;UBERON:0000930!8.31e-07!28;UBERON:0005156!9.89e-07!59;UBERON:0000990!9.89e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.05e-10;3!UBERON:0001033;2.05e-10;3!UBERON:0001043;2.36e-10;3!UBERON:0004815;5.94e-10;3!UBERON:0002031;5.94e-10;3!UBERON:0002372;1.13e-08;1!UBERON:0001961;1.13e-08;1!UBERON:0001744;1.13e-08;1!UBERON:0001042;1.13e-08;1!UBERON:0001735;1.13e-08;1!UBERON:0004911;1.57e-08;1!UBERON:0007029;4.40e-08;1!UBERON:0004913;4.40e-08;1!UBERON:0003703;4.40e-08;1!UBERON:0001174;4.40e-08;1!UBERON:0004914;4.40e-08;1!UBERON:0007196;1.73e-07;15!UBERON:0001558;1.73e-07;15!UBERON:0005631;9.25e-07;10!UBERON:0000158;9.25e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.05e-10,3;UBERON:0001033,2.05e-10,3;UBERON:0010056,2.05e-10,3;UBERON:0001043,2.15e-10,3;UBERON:0009143,2.15e-10,3;UBERON:0004815,5.68e-10,3;UBERON:0002031,5.68e-10,3;UBERON:0002372,1.13e-08,1;UBERON:0001961,1.13e-08,1;UBERON:0001744,1.13e-08,1;UBERON:0001735,1.13e-08,1;UBERON:0004911,1.63e-08,1;UBERON:0005631,3.30e-08,14;UBERON:0000158,3.30e-08,14;UBERON:0007029,3.33e-08,1;UBERON:0004913,4.72e-08,1;UBERON:0003703,4.72e-08,1;UBERON:0001174,4.72e-08,1;UBERON:0004914,4.72e-08,1;UBERON:0001041,1.09e-07,87;UBERON:0007196,1.66e-07,15;UBERON:0001558,1.66e-07,15;UBERON:0000065,4.34e-07,54;UBERON:0001042,5.70e-07,10;UBERON:0009145,5.70e-07,10;UBERON:0005178,7.80e-07,34;UBERON:0002224,7.80e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.548751427043128,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,4.23572549105123,0,0,0,0.902399225814824,0.231046011313244,0,0,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0,0,0,0,0,0,0,5.46117361732928,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.576570202095319,1.02090169995667,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,4.02181365321472,0,5.17790904272285,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.14870036263921,0.890894042497916,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.524759999977174,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.923403102045565,0,0.46112780877612,2.78248697670294,0.325942115766024,0.31900115973192,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,0.195984794828755,0.174118413160805,0.17472666824203,0,0,0,0,7.75912131907355,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0.157611414598396,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92997432237433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.300841313397029,0,0,1.04762677792569,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87863035894514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0,1.14553434272025,0,0,4.13865097651832,0.392600934460972,0.609589624911347,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0.829169439458779,0,9.80876316744512,0.476128862927481,0,0.0620747142958579,0,0.445530107947154,0.808468755832877,3.26575121845442,3.08009970976753,6.4657970894004,0.932388670104793,1.33064142618405,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.548751427043128,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,4.23572549105123,0,0,0,0.902399225814824,0.231046011313244,0,0,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0,0,0,0,0,0,0,5.46117361732928,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.576570202095319,1.02090169995667,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,4.02181365321472,0,5.17790904272285,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.14870036263921,0.890894042497916,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.524759999977174,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.923403102045565,0,0.46112780877612,2.78248697670294,0.325942115766024,0.31900115973192,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,0.195984794828755,0.174118413160805,0.17472666824203,0,0,0,0,7.75912131907355,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0.160753148465019,0.412618309791701,0,0,0,0,0,0.157611414598396,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92997432237433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.300841313397029,0,0,1.04762677792569,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87863035894514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0.430227358820278,0,0,0,1.14553434272025,0,0,4.13865097651832,0.392600934460972,0.609589624911347,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0.829169439458779,0,9.80876316744512,0.476128862927481,0,0.0620747142958579,0,0.445530107947154,0.808468755832877,3.26575121845442,3.08009970976753,6.4657970894004,0.932388670104793,1.33064142618405,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p3@EPS8L1 | |||
}} | }} |
Latest revision as of 23:40, 19 September 2015
Short description: | p3@EPS8L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPS8L1_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 27bp_to_uc010esu.1_5end |
EntrezGene: | EPS8L1 |
HGNC: | 21295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 5.46e-10 | 58 |
bronchial epithelial cell | 5.68e-10 | 3 |
endo-epithelial cell | 2.86e-09 | 42 |
respiratory epithelial cell | 1.48e-08 | 13 |
serous secreting cell | 1.63e-08 | 1 |
epithelial cell of esophagus | 3.83e-08 | 1 |
epithelial cell of tracheobronchial tree | 2.00e-07 | 9 |
epithelial cell of lower respiratory tract | 2.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.05e-10 | 3 |
gustatory system | 2.05e-10 | 3 |
future tongue | 2.05e-10 | 3 |
esophagus | 2.15e-10 | 3 |
esophageal region | 2.15e-10 | 3 |
lower respiratory tract epithelium | 5.68e-10 | 3 |
epithelium of bronchus | 5.68e-10 | 3 |
tonsil | 1.13e-08 | 1 |
mucosa-associated lymphoid tissue | 1.13e-08 | 1 |
lymphoid tissue | 1.13e-08 | 1 |
tonsillar ring | 1.13e-08 | 1 |
epithelium of female gonad | 1.63e-08 | 1 |
extraembryonic membrane | 3.30e-08 | 14 |
membranous layer | 3.30e-08 | 14 |
surface | 3.33e-08 | 1 |
hepatopancreatic ampulla | 4.72e-08 | 1 |
extrahepatic bile duct | 4.72e-08 | 1 |
common bile duct | 4.72e-08 | 1 |
duodenal papilla | 4.72e-08 | 1 |
foregut | 1.09e-07 | 87 |
tracheobronchial tree | 1.66e-07 | 15 |
lower respiratory tract | 1.66e-07 | 15 |
respiratory tract | 4.34e-07 | 54 |
chordate pharynx | 5.70e-07 | 10 |
pharyngeal region of foregut | 5.70e-07 | 10 |
thoracic cavity element | 7.80e-07 | 34 |
thoracic cavity | 7.80e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.63e-08 | 1 |
islet cell tumor | 6.68e-08 | 1 |
endocrine pancreas cancer | 6.68e-08 | 1 |
pancreatic endocrine carcinoma | 6.68e-08 | 1 |