FFCP PHASE1:Hg19::chr1:203595706..203595754,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=493 | |EntrezGene=493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=817 | |HGNC=817 | ||
|TSSclassifier=strong | |||
|UniProt=P23634 | |UniProt=P23634 | ||
|association_with_transcript=17bp_to_ENST00000357681_5end | |association_with_transcript=17bp_to_ENST00000357681_5end | ||
|cluster_id=chr1:203595706..203595754,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_9_at_ATP2B4_5end | |description=CAGE_peak_9_at_ATP2B4_5end | ||
|id=chr1:203595706..203595754,+ | |id=chr1:203595706..203595754,+ | ||
|ontology_enrichment_celltype=CL:0000084;3.47e-44;25!CL:0000791;1.46e-38;18!CL:0000789;1.46e-38;18!CL:0002419;1.46e-38;18!CL:0000625;8.53e-25;11!CL:0000542;6.06e-24;53!CL:0000624;2.19e-13;6!CL:0000623;1.47e-08;3!CL:0000767;7.78e-08;3!CL:0000898;8.06e-08;3!CL:0000226;3.10e-07;3!CL:0000842;3.10e-07;3!CL:0002087;3.37e-07;104 | |ontology_enrichment_celltype=CL:0000542!1.77e-31!53;CL:0000051!1.77e-31!53;CL:0000838!1.11e-30!52;CL:0000037!4.60e-30!172;CL:0000566!4.60e-30!172;CL:0000988!1.30e-28!182;CL:0002032!6.85e-26!165;CL:0000837!6.85e-26!165;CL:0000738!2.56e-25!140;CL:0000084!3.02e-21!25;CL:0000827!3.02e-21!25;CL:0002031!1.34e-20!124;CL:0002087!4.58e-20!119;CL:0000791!6.86e-17!18;CL:0000789!6.86e-17!18;CL:0002420!6.86e-17!18;CL:0002419!6.86e-17!18;CL:0000790!6.86e-17!18;CL:0000625!3.72e-11!11;CL:0000945!4.60e-09!24;CL:0000826!4.60e-09!24;CL:0000236!3.20e-08!14 | ||
| | |ontology_enrichment_celltype_v019=CL:0000084;3.47e-44;25!CL:0000791;1.46e-38;18!CL:0000789;1.46e-38;18!CL:0002419;1.46e-38;18!CL:0000625;8.53e-25;11!CL:0000542;6.06e-24;53!CL:0000624;2.19e-13;6!CL:0000623;1.47e-08;3!CL:0000767;7.78e-08;3!CL:0000898;8.06e-08;3!CL:0000226;3.10e-07;3!CL:0000842;3.10e-07;3!CL:0002087;3.37e-07;104 | ||
|ontology_enrichment_disease=DOID:1240;1.79e-08;39!DOID:2531;7.37e-08;51!DOID:0060083;7.37e-08;51 | |ontology_enrichment_celltype_v019_2=CL:0000084,1.55e-44,25;CL:0000827,1.55e-44,25;CL:0000542,1.13e-43,53;CL:0000051,1.13e-43,53;CL:0000838,5.99e-42,52;CL:0000791,5.42e-39,18;CL:0000789,5.42e-39,18;CL:0002420,5.42e-39,18;CL:0002419,5.42e-39,18;CL:0000790,5.42e-39,18;CL:0000037,6.51e-28,168;CL:0000988,1.01e-25,177;CL:0000625,6.12e-25,11;CL:0000738,1.49e-22,136;CL:0002032,3.01e-22,161;CL:0000837,3.01e-22,161;CL:0002087,4.20e-19,115;CL:0002031,1.52e-15,120;CL:0000624,1.13e-13,6;CL:0000623,1.41e-08,3;CL:0000825,1.41e-08,3;CL:0000898,5.85e-08,3;CL:0000767,8.86e-08,3;CL:0000226,3.18e-07,3;CL:0000842,3.18e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0000178;5.49e-19;15!UBERON:0000179;5.49e-19;15!UBERON:0000463;5.49e-19;15!UBERON:0002390;1.52e-12;32!UBERON:0002193;5.95e-08;42 | |ontology_enrichment_development_v019=CL:0000790;1.46e-38;18!CL:0000051;6.06e-24;53 | ||
|ontology_enrichment_disease=DOID:2531!2.22e-10!51;DOID:0060083!2.22e-10!51;DOID:1240!2.00e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.79e-08;39!DOID:2531;7.37e-08;51!DOID:0060083;7.37e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.88e-11,51;DOID:0060083,1.88e-11,51;DOID:1240,5.09e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.13e-10!15;UBERON:0000179!1.13e-10!15;UBERON:0000463!1.13e-10!15;UBERON:0002390!8.81e-07!102;UBERON:0003061!8.81e-07!102;UBERON:0004177!9.09e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.49e-19;15!UBERON:0000179;5.49e-19;15!UBERON:0000463;5.49e-19;15!UBERON:0002390;1.52e-12;32!UBERON:0002193;5.95e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.41e-19,15;UBERON:0000179,5.41e-19,15;UBERON:0000463,5.41e-19,15;UBERON:0002370,3.40e-10,4;UBERON:0005058,3.40e-10,4;UBERON:0009113,3.40e-10,4;UBERON:0003295,3.40e-10,4;UBERON:0005562,3.40e-10,4;UBERON:0003351,1.08e-09,6;UBERON:0004177,2.83e-08,7;UBERON:0005057,2.83e-08,7;UBERON:0001042,9.93e-08,10;UBERON:0009145,9.93e-08,10;UBERON:0006562,5.93e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0.229240217243854,0.492603536699674,0.314843125254717,4.32700704533794,7.67658796194425,2.32224184974114,0,0,0.369754010166788,1.00707360754392,0.426507697462265,1.17440175733939,0.553995408531877,0.601633342410425,3.25516306073778,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,1.75996244461323,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,1.98313461835459,0.954053754535364,0,1.76171156811282,1.14681968437569,1.32171328579026,1.12101712596307,1.31692042387539,1.96709770113833,4.32311839024081,2.87842098599313,10.1983762188314,1.95553359980154,1.4203434172042,3.89653456815823,15.5974639639243,8.83817722424511,8.63982188876122,11.3737622781307,8.58211842162024,11.5752819328292,7.39970570716543,4.69795030235942,6.0858648004361,0.444859689486181,1.07016331235885,0,11.1043155843615,7.66440987203842,4.46715679127419,8.09663014462409,3.50421955756506,6.51083453856419,5.70271226669025,4.9689789295665,7.93516989157394,3.74792179657038,4.49876778883632,5.74789597844733,5.84659555351724,5.88368430723716,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0.649094787309367,0.174129737299267,0,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0.211931901159562,0.300091096084402,0,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0,0,1.97065295158377,1.93706554829097,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,3.6988097517864,9.65450724989443,9.05635814409973,7.9572682493444,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.68798433959754,1.2942852049117,4.48255742774466,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,1.13008116620243,0,0.66343897524122,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0.329294892959902,0.75894634753143,0,0,0,0,0,0,0,0,0.229723400206959,2.02979043692868,1.52927441428475,2.84823593587081,2.38231775457789,3.70226045777575,2.59389324477087,3.24018862342869,5.55187623405989,0,0,0,2.60124445176006,0.28853842595289,4.26851060090485,2.71024663638998,1.99579371432817,0.5745161103971,1.90506224451495,0,1.12318871245384,2.28234679033192,0.313359791546046,0,0.50787533340481,1.1241165257259,0.403599414382095,0,0,0.614481528616916,0.223676107892416,0,0.586164286206121,0,0,1.35227839237992,1.33228787199128,0,0,0.293016358543788,0,0.222886768554957,0,0.95497793895076,0.296964680832639,0.614321404198464,0,0.281338832821026,0,0.16480387422676,0,0,1.65770349318689,1.0077309914171,0,0.123084805461069,0.311039587661807,0,0,0,0.0986434056369336,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0.957003479195758,0,0,2.04386596391473,2.66866435871542,1.16348177330109,0,0,0,0,1.43042921082341,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0.370691816839509,0.417687798021821,0.134802265961354,0,0.234264445725339,0.364909578431332,0,0.242780379534093,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0.484945082442097,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0.209205692624666,0,0,0,0,0,0,5.5206344398656,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0,0,0.129282956361551,0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| ||
|short_description=p9@ATP2B4 | |short_description=p9@ATP2B4 | ||
}} | }} |
Latest revision as of 23:28, 19 September 2015
Short description: | p9@ATP2B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ATP2B4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 17bp_to_ENST00000357681_5end |
EntrezGene: | ATP2B4 |
HGNC: | 817 |
UniProt: | P23634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.55e-44 | 25 |
pro-T cell | 1.55e-44 | 25 |
lymphocyte | 1.13e-43 | 53 |
common lymphoid progenitor | 1.13e-43 | 53 |
lymphoid lineage restricted progenitor cell | 5.99e-42 | 52 |
mature alpha-beta T cell | 5.42e-39 | 18 |
alpha-beta T cell | 5.42e-39 | 18 |
immature T cell | 5.42e-39 | 18 |
mature T cell | 5.42e-39 | 18 |
immature alpha-beta T cell | 5.42e-39 | 18 |
hematopoietic stem cell | 6.51e-28 | 168 |
hematopoietic cell | 1.01e-25 | 177 |
CD8-positive, alpha-beta T cell | 6.12e-25 | 11 |
leukocyte | 1.49e-22 | 136 |
hematopoietic oligopotent progenitor cell | 3.01e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.01e-22 | 161 |
nongranular leukocyte | 4.20e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.52e-15 | 120 |
CD4-positive, alpha-beta T cell | 1.13e-13 | 6 |
natural killer cell | 1.41e-08 | 3 |
pro-NK cell | 1.41e-08 | 3 |
naive T cell | 5.85e-08 | 3 |
basophil | 8.86e-08 | 3 |
single nucleate cell | 3.18e-07 | 3 |
mononuclear cell | 3.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 5.41e-19 | 15 |
haemolymphatic fluid | 5.41e-19 | 15 |
organism substance | 5.41e-19 | 15 |
thymus | 3.40e-10 | 4 |
hemolymphoid system gland | 3.40e-10 | 4 |
thymic region | 3.40e-10 | 4 |
pharyngeal gland | 3.40e-10 | 4 |
thymus primordium | 3.40e-10 | 4 |
pharyngeal epithelium | 1.08e-09 | 6 |
hemopoietic organ | 2.83e-08 | 7 |
immune organ | 2.83e-08 | 7 |
chordate pharynx | 9.93e-08 | 10 |
pharyngeal region of foregut | 9.93e-08 | 10 |
pharynx | 5.93e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.88e-11 | 51 |
immune system cancer | 1.88e-11 | 51 |
leukemia | 5.09e-10 | 39 |