FFCP PHASE1:Hg19::chr2:21231797..21231806,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=Q13789 | |UniProt=Q13789 | ||
|association_with_transcript=-281bp_to_X03324_5end | |||
|cluster_id=chr2:21231797..21231806,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_52_at_APOB_5end | |||
|id=chr2:21231797..21231806,- | |||
|ontology_enrichment_celltype=CL:0000181!6.68e-29!12;CL:0000417!6.68e-29!12;CL:0000668!6.68e-29!12;CL:0000414!6.68e-29!12;CL:0000412!6.68e-29!12;CL:0000182!6.68e-29!12;CL:0000223!1.69e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.21e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.38e-59,12;CL:0000223,2.68e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.09e-45;11!UBERON:0009497;5.51e-38;13!UBERON:0001041;1.28e-16;30!UBERON:0003104;4.72e-16;31!CL:0000223;3.25e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.37e-32!19;UBERON:0006925!6.37e-32!19;UBERON:0008836!6.37e-32!19;UBERON:0005057!5.86e-29!26;UBERON:0008835!1.89e-27!22;UBERON:0003894!1.89e-27!22;UBERON:0009854!3.23e-26!23;UBERON:0007499!4.78e-24!25;UBERON:0009497!4.78e-24!25;UBERON:0000015!4.78e-24!25;UBERON:0002423!4.78e-24!25;UBERON:0006235!4.78e-24!25;UBERON:0004161!4.78e-24!25;UBERON:0009856!4.36e-23!26;UBERON:0002365!3.27e-19!31;UBERON:0002330!3.27e-19!31;UBERON:0002368!6.59e-17!35;UBERON:0003929!1.86e-16!54;UBERON:0004921!2.65e-16!129;UBERON:0004185!2.65e-16!129;UBERON:0001007!3.70e-13!155;UBERON:0001555!3.70e-13!155;UBERON:0007026!3.70e-13!155;UBERON:0005172!4.66e-13!55;UBERON:0005173!4.66e-13!55;UBERON:0000949!6.22e-13!45;UBERON:0005911!1.59e-12!82;UBERON:0002530!4.17e-12!59;UBERON:0004119!7.33e-12!169;UBERON:0000925!7.33e-12!169;UBERON:0006595!7.33e-12!169;UBERON:0002417!1.19e-11!61;UBERON:0000916!1.19e-11!61;UBERON:0007029!9.97e-11!1;UBERON:0005409!5.20e-09!35;UBERON:0001041!2.27e-08!98;UBERON:0000160!2.33e-08!27;UBERON:0005177!1.53e-07!107;UBERON:0000077!3.02e-07!130;UBERON:0009569!4.62e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.48e-66;19!UBERON:0006925;3.48e-66;19!UBERON:0002423;2.66e-50;25!UBERON:0002365;5.27e-39;31!UBERON:0002330;5.27e-39;31!UBERON:0002368;2.10e-34;33!UBERON:0000949;4.00e-25;43!UBERON:0002108;1.31e-16;4!UBERON:0005172;5.54e-15;52!UBERON:0005173;5.54e-15;52!UBERON:0002417;3.86e-13;58!UBERON:0000916;3.86e-13;58!UBERON:0002530;5.32e-13;57!UBERON:0001007;2.31e-12;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.20e-66,19;UBERON:0006925,3.20e-66,19;UBERON:0008836,3.20e-66,19;UBERON:0008835,3.41e-57,22;UBERON:0003894,3.41e-57,22;UBERON:0009854,1.05e-54,23;UBERON:0007499,2.50e-50,25;UBERON:0009497,2.50e-50,25;UBERON:0000015,2.50e-50,25;UBERON:0002423,2.50e-50,25;UBERON:0006235,2.50e-50,25;UBERON:0004161,2.50e-50,25;UBERON:0009856,2.16e-48,26;UBERON:0002365,1.41e-40,31;UBERON:0002330,1.41e-40,31;UBERON:0002368,6.26e-36,35;UBERON:0000949,6.47e-28,45;UBERON:0003929,3.12e-23,54;UBERON:0005172,3.12e-23,54;UBERON:0005173,3.12e-23,54;UBERON:0002530,3.03e-21,59;UBERON:0002417,6.91e-21,60;UBERON:0000916,6.91e-21,60;UBERON:0002108,1.42e-16,4;UBERON:0004921,3.14e-16,118;UBERON:0005911,3.28e-15,82;UBERON:0001041,2.56e-14,87;UBERON:0001007,3.78e-13,145;UBERON:0001555,3.78e-13,145;UBERON:0007026,3.78e-13,145;UBERON:0005177,2.76e-12,101;UBERON:0004119,7.01e-12,160;UBERON:0000925,7.01e-12,160;UBERON:0006595,7.01e-12,160;UBERON:0009569,4.83e-11,112;UBERON:0003914,1.49e-10,117;UBERON:0005256,4.19e-10,122;UBERON:0011216,2.87e-08,223;UBERON:0000490,2.98e-08,148;UBERON:0001048,1.35e-07,160;UBERON:0003104,1.35e-07,160;UBERON:0009142,1.35e-07,160 | |||
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|short_description=p52@APOB | |||
}} | }} |
Latest revision as of 23:17, 19 September 2015
Short description: | p52@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_52_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -281bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.38e-59 | 12 |
endodermal cell | 2.68e-12 | 58 |