FFCP PHASE1:Hg19::chr2:21231259..21231266,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=Q13789 | |UniProt=Q13789 | ||
|association_with_transcript=249bp_to_X03324_5end | |association_with_transcript=249bp_to_X03324_5end | ||
|cluster_id=chr2:21231259..21231266,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_84_at_APOB_5end | |description=CAGE_peak_84_at_APOB_5end | ||
|id=chr2:21231259..21231266,- | |id=chr2:21231259..21231266,- | ||
|ontology_enrichment_celltype=CL:0000181!6.22e-46!12;CL:0000417!6.22e-46!12;CL:0000668!6.22e-46!12;CL:0000414!6.22e-46!12;CL:0000412!6.22e-46!12;CL:0000182!6.22e-46!12;CL:0000223!5.28e-16!59 | |ontology_enrichment_celltype=CL:0000181!6.22e-46!12;CL:0000417!6.22e-46!12;CL:0000668!6.22e-46!12;CL:0000414!6.22e-46!12;CL:0000412!6.22e-46!12;CL:0000182!6.22e-46!12;CL:0000223!5.28e-16!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.67e-68;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.21e-68,12;CL:0000223,1.15e-14,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.66e-48;11!UBERON:0009497;8.41e-41;13!UBERON:0001041;4.09e-18;30!UBERON:0003104;2.28e-17;31!CL:0000223;2.90e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;9.72e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.54e-08,39 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;2.55e-62;19!UBERON:0006925;2.55e-62;19!UBERON:0002423;1.49e-47;25!UBERON:0002365;2.27e-37;31!UBERON:0002330;2.27e-37;31!UBERON:0002368;1.12e-30;33!UBERON:0000949;4.50e-25;43!UBERON:0005172;1.55e-14;52!UBERON:0005173;1.55e-14;52!UBERON:0002530;2.30e-13;57!UBERON:0002417;3.55e-13;58!UBERON:0000916;3.55e-13;58!UBERON:0001007;4.35e-09;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.55e-62,19;UBERON:0006925,2.55e-62,19;UBERON:0008836,2.55e-62,19;UBERON:0008835,6.24e-54,22;UBERON:0003894,6.24e-54,22;UBERON:0009854,1.28e-51,23;UBERON:0007499,1.50e-47,25;UBERON:0009497,1.50e-47,25;UBERON:0000015,1.50e-47,25;UBERON:0002423,1.50e-47,25;UBERON:0006235,1.50e-47,25;UBERON:0004161,1.50e-47,25;UBERON:0009856,9.44e-46,26;UBERON:0002365,1.73e-38,31;UBERON:0002330,1.73e-38,31;UBERON:0002368,3.60e-34,35;UBERON:0000949,1.01e-26,45;UBERON:0003929,2.29e-22,54;UBERON:0005172,2.29e-22,54;UBERON:0005173,2.29e-22,54;UBERON:0002530,1.61e-20,59;UBERON:0002417,3.46e-20,60;UBERON:0000916,3.46e-20,60;UBERON:0005911,6.57e-15,82;UBERON:0001041,4.44e-14,87;UBERON:0005177,3.45e-12,101;UBERON:0009569,4.95e-11,112;UBERON:0003914,1.41e-10,117;UBERON:0004921,2.09e-10,118;UBERON:0005256,3.69e-10,122;UBERON:0001007,1.51e-08,145;UBERON:0001555,1.51e-08,145;UBERON:0007026,1.51e-08,145;UBERON:0000490,1.95e-08,148;UBERON:0001048,7.94e-08,160;UBERON:0003104,7.94e-08,160;UBERON:0009142,7.94e-08,160;UBERON:0004119,8.84e-08,160;UBERON:0000925,8.84e-08,160;UBERON:0006595,8.84e-08,160 | |||
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|short_description=p84@APOB | |short_description=p84@APOB | ||
}} | }} |
Latest revision as of 23:13, 19 September 2015
Short description: | p84@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_84_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 249bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.21e-68 | 12 |
endodermal cell | 1.15e-14 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.54e-08 | 39 |