FFCP PHASE1:Hg19::chr2:21230675..21230682,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-102bp_to_X03045_5end | |association_with_transcript=-102bp_to_X03045_5end | ||
|cluster_id=chr2:21230675..21230682,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_51_at_APOB_5end | |description=CAGE_peak_51_at_APOB_5end | ||
|id=chr2:21230675..21230682,- | |id=chr2:21230675..21230682,- | ||
|ontology_enrichment_celltype=CL:0000181!1.17e-37!12;CL:0000417!1.17e-37!12;CL:0000668!1.17e-37!12;CL:0000414!1.17e-37!12;CL:0000412!1.17e-37!12;CL:0000182!1.17e-37!12;CL:0000223!8.03e-13!59 | |ontology_enrichment_celltype=CL:0000181!1.17e-37!12;CL:0000417!1.17e-37!12;CL:0000668!1.17e-37!12;CL:0000414!1.17e-37!12;CL:0000412!1.17e-37!12;CL:0000182!1.17e-37!12;CL:0000223!8.03e-13!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.53e-84;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.05e-84,12;CL:0000223,8.36e-18,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.93e-41;11!UBERON:0009497;4.96e-35;13!UBERON:0001041;1.50e-15;30!UBERON:0003104;6.47e-15;31!CL:0000223;5.68e-13;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;1.45e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,3.17e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!4.54e-32!19;UBERON:0006925!4.54e-32!19;UBERON:0008836!4.54e-32!19;UBERON:0008835!1.23e-27!22;UBERON:0003894!1.23e-27!22;UBERON:0009854!2.04e-26!23;UBERON:0007499!2.89e-24!25;UBERON:0009497!2.89e-24!25;UBERON:0000015!2.89e-24!25;UBERON:0002423!2.89e-24!25;UBERON:0006235!2.89e-24!25;UBERON:0004161!2.89e-24!25;UBERON:0005057!2.58e-23!26;UBERON:0009856!2.58e-23!26;UBERON:0002365!1.79e-19!31;UBERON:0002330!1.79e-19!31;UBERON:0003929!7.87e-18!54;UBERON:0002368!3.45e-17!35;UBERON:0004921!1.26e-14!129;UBERON:0004185!1.26e-14!129;UBERON:0000949!3.02e-13!45;UBERON:0002530!7.04e-13!59;UBERON:0001007!6.47e-12!155;UBERON:0001555!6.47e-12!155;UBERON:0007026!6.47e-12!155;UBERON:0005911!2.12e-11!82;UBERON:0000160!6.04e-11!27;UBERON:0004119!8.53e-11!169;UBERON:0000925!8.53e-11!169;UBERON:0006595!8.53e-11!169;UBERON:0005172!9.91e-11!55;UBERON:0005173!9.91e-11!55;UBERON:0002417!1.29e-09!61;UBERON:0000916!1.29e-09!61;UBERON:0005409!1.69e-08!35;UBERON:0002108!5.25e-08!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.97e-72;19!UBERON:0006925;1.97e-72;19!UBERON:0002423;3.43e-55;25!UBERON:0002365;1.14e-43;31!UBERON:0002330;1.14e-43;31!UBERON:0002368;7.99e-37;33!UBERON:0000949;1.26e-29;43!UBERON:0005172;6.67e-17;52!UBERON:0005173;6.67e-17;52!UBERON:0002530;2.40e-15;57!UBERON:0002417;3.32e-14;58!UBERON:0000916;3.32e-14;58!UBERON:0001007;6.82e-11;81!UBERON:0009569;7.22e-07;110 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.97e-72,19;UBERON:0006925,1.97e-72,19;UBERON:0008836,1.97e-72,19;UBERON:0008835,1.23e-62,22;UBERON:0003894,1.23e-62,22;UBERON:0009854,6.11e-60,23;UBERON:0007499,3.43e-55,25;UBERON:0009497,3.43e-55,25;UBERON:0000015,3.43e-55,25;UBERON:0002423,3.43e-55,25;UBERON:0006235,3.43e-55,25;UBERON:0004161,3.43e-55,25;UBERON:0009856,4.32e-53,26;UBERON:0002365,1.29e-44,31;UBERON:0002330,1.29e-44,31;UBERON:0002368,1.42e-39,35;UBERON:0000949,6.99e-31,45;UBERON:0003929,8.37e-26,54;UBERON:0005172,8.37e-26,54;UBERON:0005173,8.37e-26,54;UBERON:0002530,1.20e-23,59;UBERON:0002417,2.92e-23,60;UBERON:0000916,2.92e-23,60;UBERON:0005911,4.16e-17,82;UBERON:0001041,3.85e-16,87;UBERON:0005177,6.14e-14,101;UBERON:0009569,1.36e-12,112;UBERON:0003914,4.62e-12,117;UBERON:0004921,7.31e-12,118;UBERON:0005256,1.42e-11,122;UBERON:0001007,1.06e-09,145;UBERON:0001555,1.06e-09,145;UBERON:0007026,1.06e-09,145;UBERON:0000490,1.43e-09,148;UBERON:0001048,7.33e-09,160;UBERON:0003104,7.33e-09,160;UBERON:0009142,7.33e-09,160;UBERON:0004119,8.31e-09,160;UBERON:0000925,8.31e-09,160;UBERON:0006595,8.31e-09,160;UBERON:0000025,2.32e-07,192;UBERON:0002100,3.86e-07,199 | |||
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|short_description=p51@APOB | |short_description=p51@APOB | ||
}} | }} |
Latest revision as of 23:09, 19 September 2015
Short description: | p51@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -102bp_to_X03045_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.05e-84 | 12 |
endodermal cell | 8.36e-18 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 3.17e-07 | 39 |