FFCP PHASE1:Hg19::chr2:21230274..21230283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=131bp_to_M10374_5end | |association_with_transcript=131bp_to_M10374_5end | ||
|cluster_id=chr2:21230274..21230283,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_33_at_APOB_5end | |description=CAGE_peak_33_at_APOB_5end | ||
|id=chr2:21230274..21230283,- | |id=chr2:21230274..21230283,- | ||
|ontology_enrichment_celltype=CL:0000181!1.03e-37!12;CL:0000417!1.03e-37!12;CL:0000668!1.03e-37!12;CL:0000414!1.03e-37!12;CL:0000412!1.03e-37!12;CL:0000182!1.03e-37!12;CL:0000223!2.00e-07!59 | |ontology_enrichment_celltype=CL:0000181!1.03e-37!12;CL:0000417!1.03e-37!12;CL:0000668!1.03e-37!12;CL:0000414!1.03e-37!12;CL:0000412!1.03e-37!12;CL:0000182!1.03e-37!12;CL:0000223!2.00e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.67e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.67e-59,12;CL:0000223,2.33e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.46e-45;11!UBERON:0009497;5.72e-38;13!UBERON:0001041;1.30e-16;30!UBERON:0003104;4.81e-16;31!CL:0000223;3.02e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.17e-41!19;UBERON:0006925!1.17e-41!19;UBERON:0008836!1.17e-41!19;UBERON:0005057!4.64e-38!26;UBERON:0008835!6.81e-36!22;UBERON:0003894!6.81e-36!22;UBERON:0009854!2.64e-34!23;UBERON:0007499!1.65e-31!25;UBERON:0009497!1.65e-31!25;UBERON:0000015!1.65e-31!25;UBERON:0002423!1.65e-31!25;UBERON:0006235!1.65e-31!25;UBERON:0004161!1.65e-31!25;UBERON:0009856!2.85e-30!26;UBERON:0002365!2.80e-25!31;UBERON:0002330!2.80e-25!31;UBERON:0002368!2.61e-22!35;UBERON:0005172!1.63e-17!55;UBERON:0005173!1.63e-17!55;UBERON:0000949!3.46e-17!45;UBERON:0002417!1.07e-15!61;UBERON:0000916!1.07e-15!61;UBERON:0003929!3.42e-14!54;UBERON:0002530!6.38e-13!59;UBERON:0004921!2.24e-12!129;UBERON:0004185!2.24e-12!129;UBERON:0001007!4.71e-10!155;UBERON:0001555!4.71e-10!155;UBERON:0007026!4.71e-10!155;UBERON:0001041!2.22e-09!98;UBERON:0004119!4.28e-09!169;UBERON:0000925!4.28e-09!169;UBERON:0006595!4.28e-09!169;UBERON:0005911!4.61e-09!82;UBERON:0005177!1.68e-08!107;UBERON:0009569!5.42e-08!113;UBERON:0002405!9.31e-08!115;UBERON:0000466!4.69e-07!126;UBERON:0000077!8.36e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.48e-66;19!UBERON:0006925;3.48e-66;19!UBERON:0002423;2.66e-50;25!UBERON:0002365;5.36e-39;31!UBERON:0002330;5.36e-39;31!UBERON:0002368;2.05e-34;33!UBERON:0000949;3.87e-25;43!UBERON:0002108;1.31e-16;4!UBERON:0005172;5.67e-15;52!UBERON:0005173;5.67e-15;52!UBERON:0002417;3.88e-13;58!UBERON:0000916;3.88e-13;58!UBERON:0002530;5.19e-13;57!UBERON:0001007;2.34e-12;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.48e-66,19;UBERON:0006925,3.48e-66,19;UBERON:0008836,3.48e-66,19;UBERON:0008835,3.67e-57,22;UBERON:0003894,3.67e-57,22;UBERON:0009854,1.12e-54,23;UBERON:0007499,2.66e-50,25;UBERON:0009497,2.66e-50,25;UBERON:0000015,2.66e-50,25;UBERON:0002423,2.66e-50,25;UBERON:0006235,2.66e-50,25;UBERON:0004161,2.66e-50,25;UBERON:0009856,2.30e-48,26;UBERON:0002365,1.48e-40,31;UBERON:0002330,1.48e-40,31;UBERON:0002368,6.55e-36,35;UBERON:0000949,6.71e-28,45;UBERON:0003929,3.22e-23,54;UBERON:0005172,3.22e-23,54;UBERON:0005173,3.22e-23,54;UBERON:0002530,3.11e-21,59;UBERON:0002417,7.10e-21,60;UBERON:0000916,7.10e-21,60;UBERON:0002108,1.31e-16,4;UBERON:0004921,3.14e-16,118;UBERON:0005911,3.35e-15,82;UBERON:0001041,2.61e-14,87;UBERON:0001007,3.78e-13,145;UBERON:0001555,3.78e-13,145;UBERON:0007026,3.78e-13,145;UBERON:0005177,2.80e-12,101;UBERON:0004119,7.01e-12,160;UBERON:0000925,7.01e-12,160;UBERON:0006595,7.01e-12,160;UBERON:0009569,4.90e-11,112;UBERON:0003914,1.51e-10,117;UBERON:0005256,4.25e-10,122;UBERON:0011216,2.87e-08,223;UBERON:0000490,3.02e-08,148;UBERON:0001048,1.36e-07,160;UBERON:0003104,1.36e-07,160;UBERON:0009142,1.36e-07,160 | |||
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|short_description=p33@APOB | |short_description=p33@APOB | ||
}} | }} |
Latest revision as of 23:06, 19 September 2015
Short description: | p33@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 131bp_to_M10374_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.67e-59 | 12 |
endodermal cell | 2.33e-12 | 58 |