FFCP PHASE1:Hg19::chr2:21225379..21225395,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:21225379..21225395,-
|short_description=p19@APOB
|description=CAGE_peak_19_at_APOB_5end
|association_with_transcript=245bp_to_M36676_5end
|EntrezGene=338
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=245bp_to_M36676_5end | |||
|cluster_id=chr2:21225379..21225395,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_19_at_APOB_5end | |||
|id=chr2:21225379..21225395,- | |||
|ontology_enrichment_celltype=CL:0000181!1.13e-33!12;CL:0000417!1.13e-33!12;CL:0000668!1.13e-33!12;CL:0000414!1.13e-33!12;CL:0000412!1.13e-33!12;CL:0000182!1.13e-33!12;CL:0000223!3.44e-14!59;CL:0002563!1.05e-11!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.67e-59;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.67e-59,12;CL:0000223,2.33e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.53e-29;11!UBERON:0009497;8.96e-25;13!UBERON:0001041;5.57e-11;30!UBERON:0003104;1.53e-10;31!CL:0000223;3.02e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.43e-28!19;UBERON:0006925!1.43e-28!19;UBERON:0008836!1.43e-28!19;UBERON:0008835!1.33e-24!22;UBERON:0003894!1.33e-24!22;UBERON:0009854!1.65e-23!23;UBERON:0007499!1.39e-21!25;UBERON:0009497!1.39e-21!25;UBERON:0000015!1.39e-21!25;UBERON:0002423!1.39e-21!25;UBERON:0006235!1.39e-21!25;UBERON:0004161!1.39e-21!25;UBERON:0005057!9.88e-21!26;UBERON:0009856!9.88e-21!26;UBERON:0003929!2.59e-19!54;UBERON:0000160!1.83e-18!27;UBERON:0002365!2.71e-17!31;UBERON:0002330!2.71e-17!31;UBERON:0004921!3.75e-17!129;UBERON:0004185!3.75e-17!129;UBERON:0002368!3.02e-15!35;UBERON:0005409!3.12e-14!35;UBERON:0001007!6.00e-14!155;UBERON:0001555!6.00e-14!155;UBERON:0007026!6.00e-14!155;UBERON:0004119!1.26e-12!169;UBERON:0000925!1.26e-12!169;UBERON:0006595!1.26e-12!169;UBERON:0005911!2.84e-12!82;UBERON:0000949!1.02e-11!45;UBERON:0001242!1.05e-11!4;UBERON:0001262!1.05e-11!4;UBERON:0004786!1.05e-11!4;UBERON:0004808!1.05e-11!4;UBERON:0001277!1.05e-11!4;UBERON:0001155!1.82e-11!9;UBERON:0002530!2.49e-11!59;UBERON:0003350!1.50e-09!5;UBERON:0000059!1.75e-09!11;UBERON:0005172!1.83e-09!55;UBERON:0005173!1.83e-09!55;UBERON:0002417!1.82e-08!61;UBERON:0000916!1.82e-08!61;UBERON:0002108!3.43e-07!14;UBERON:0000490!9.76e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.58e-51;19!UBERON:0006925;6.58e-51;19!UBERON:0002423;1.05e-38;25!UBERON:0002365;1.42e-30;31!UBERON:0002330;1.42e-30;31!UBERON:0002368;8.21e-26;33!UBERON:0000949;8.39e-21;43!UBERON:0002108;1.17e-16;4!UBERON:0005172;6.03e-12;52!UBERON:0005173;6.03e-12;52!UBERON:0002530;7.12e-11;57!UBERON:0001007;1.29e-10;81!UBERON:0002417;4.13e-10;58!UBERON:0000916;4.13e-10;58 | |||
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|short_description=p19@APOB | |||
}} | }} |
Latest revision as of 22:51, 19 September 2015
Short description: | p19@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 245bp_to_M36676_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.67e-59 | 12 |
endodermal cell | 2.33e-12 | 58 |