FFCP PHASE2:Hg19::chr5:1201575..1201595,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:340024 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:27960 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=340024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=27960 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q695T7,E9PD72 | ||
|association_with_transcript=-114bp_to_ENST00000304460,ENST00000515652,NM_001003841,uc003jbw.3_5end | |association_with_transcript=-114bp_to_ENST00000304460,ENST00000515652,NM_001003841,uc003jbw.3_5end | ||
|cluster_id=chr5:1201575..1201595,+ | |cluster_id=chr5:1201575..1201595,+ |
Latest revision as of 22:48, 19 September 2015
Short description: | p3@SLC6A19 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC6A19_5end |
Coexpression cluster: | C266_acute_chronic_leukemia_small_choriocarcinoma_hepatoma_Mast |
Association with transcript: | -114bp_to_ENST00000304460, ENST00000515652, NM_001003841, uc003jbw.3_5end |
EntrezGene: | SLC6A19 |
HGNC: | 27960 |
UniProt: | Q695T7E9PD72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@SLC6A19 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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germ line cell | 4.57e-09 | 7 |
germ cell | 4.57e-09 | 7 |
epithelial cell of cervix | 3.08e-08 | 2 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
small intestine | 6.59e-26 | 4 |
uterine epithelium | 3.08e-08 | 2 |
cervix epithelium | 3.08e-08 | 2 |
intestine | 1.22e-07 | 17 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 1.34e-15 | 1 |
islet cell tumor | 2.38e-15 | 1 |
endocrine pancreas cancer | 2.38e-15 | 1 |
pancreatic endocrine carcinoma | 2.38e-15 | 1 |
myeloid leukemia | 1.49e-11 | 31 |
leukemia | 3.54e-09 | 39 |
hematologic cancer | 5.31e-07 | 51 |
immune system cancer | 5.31e-07 | 51 |
Showing 1 to 8 of 8 entries