FFCP PHASE1:Hg19::chr17:37894147..37894167,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:37894147..37894167,+ to FFCP PHASE1:Hg19::chr17:37894147..37894167,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2886 | |EntrezGene=2886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4567 | |HGNC=4567 | ||
|TSSclassifier=strong | |||
|UniProt=Q14451 | |UniProt=Q14451 | ||
|association_with_transcript=0bp_to_NM_005310_5end | |||
|cluster_id=chr17:37894147..37894167,+ | |||
|description=CAGE_peak_4_at_GRB7_5end | |||
|id=chr17:37894147..37894167,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.37e-28!254;CL:0002076!7.17e-10!43;CL:0000223!1.40e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.55e-14;10!CL:1000494;2.55e-14;10!CL:0002322;9.92e-13;5!CL:1000497;8.04e-11;17!CL:0002518;8.04e-11;17!CL:1000449;2.60e-09;15!CL:0000575;1.33e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.70e-14,10;CL:1000494,3.70e-14,10;CL:0002322,1.71e-12,5;CL:1000497,9.03e-11,17;CL:0002518,9.03e-11,17;CL:1000449,3.29e-09,15;CL:0000575,9.40e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.61e-12;3 | |||
|ontology_enrichment_disease=DOID:305!1.22e-21!106;DOID:0050687!4.54e-17!143;DOID:162!2.54e-07!235;DOID:14566!5.32e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.59e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.41e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.18e-13!169;UBERON:0000925!1.18e-13!169;UBERON:0006595!1.18e-13!169;UBERON:0001007!4.00e-11!155;UBERON:0001555!4.00e-11!155;UBERON:0007026!4.00e-11!155;UBERON:0000464!4.40e-11!104;UBERON:0000064!1.41e-10!219;UBERON:0000466!1.54e-10!126;UBERON:0004921!5.28e-10!129;UBERON:0004185!5.28e-10!129;UBERON:0006554!1.26e-08!44;UBERON:0001004!1.81e-08!72;UBERON:0001008!3.03e-08!45;UBERON:0000077!3.93e-08!130;UBERON:0005911!6.03e-08!82;UBERON:0000344!9.91e-08!12;UBERON:0001048!1.25e-07!168;UBERON:0005177!1.39e-07!107;UBERON:0000481!1.80e-07!347;UBERON:0002553!2.62e-07!70;UBERON:0000058!2.81e-07!26;UBERON:0000063!3.17e-07!97;UBERON:0003064!3.40e-07!37;UBERON:0000065!5.02e-07!53;UBERON:0000062!6.10e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.55e-14;10!UBERON:0009773;2.55e-14;10!UBERON:0001231;2.55e-14;10!UBERON:0004810;2.55e-14;10!UBERON:0006554;2.38e-11;30!UBERON:0001008;2.38e-11;30!UBERON:0002113;1.73e-09;24!UBERON:0011143;1.73e-09;24!UBERON:0006555;2.60e-09;15!UBERON:0004819;2.60e-09;15!UBERON:0001285;2.60e-09;15!UBERON:0007684;2.60e-09;15!UBERON:0000489;1.27e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.70e-14,10;UBERON:0006554,2.10e-11,47;UBERON:0001008,4.16e-11,48;UBERON:0002113,4.91e-11,26;UBERON:0003918,4.91e-11,26;UBERON:0011143,4.91e-11,26;UBERON:0005095,4.91e-11,26;UBERON:0007687,4.91e-11,26;UBERON:0004211,3.29e-09,15;UBERON:0009773,3.29e-09,15;UBERON:0001231,3.29e-09,15;UBERON:0001285,3.29e-09,15;UBERON:0007684,3.29e-09,15;UBERON:0004208,3.29e-09,15;UBERON:0000489,5.49e-09,31;UBERON:0006555,1.37e-08,16;UBERON:0004819,1.37e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.175669571386252,0.130979075497713,1.45718115317017,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,1.58565817968474,0.927708378250397,2.09149097165133,1.14027160516907,1.00928340350251,1.82488679537915,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0.301586917234893,0.555530670951178,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.671928512795438,0.283550194484773,0.53735113621709,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,1.20956117331872,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0,1.30926073077505,3.13739907670742,4.38417673959782,1.16106791782163,0,0,0.431831832204279,0,0.812839312631559,5.01689773854853,0.764628819135115,0,2.0148727924996,0,0,0.512900250232778,0.328014645699706,0.650756789328606,0.9273691048295,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.638063562472921,0.6069466851333,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,1.08890984861323,1.50630081242847,1.29151611801369,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,0.47748896947538,0.890894042497916,1.53580351049616,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.269605053441981,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,1.48681999993533,0,0.227586896570999,0.508507300585533,0.472775363535873,0,0.874813840149763,0.347249989866585,0,0,1.52581736317083,1.10579259931225,1.47773809476774,0,0,1.11538995422883,0.230850775511391,0,0.23056390438806,1.07709173291727,0.651884231532048,0.957003479195758,0.366390373607449,2.13213910407454,0,0,0,0.451191321234361,0.784250137270958,0,0,0,4.43095935508857,2.77495773870551,0.989471500037586,0.432777279484182,2.98578579323551,0.176915129006678,0,0,0,0,0,0,0,0,2.34797542718508,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.520679215005393,0.0979923974143777,0.261177619741208,0.52418000472609,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,1.16386819786103,0.176512253383001,0.225980740780532,0,0,0.189932387867636,0,0.320635281006135,0.426905989478705,0,0.144090417154106,0,0,0,0,0.707082103850386,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.741742725430498,0.404421263125109,0.0984274815147488,0,0,0,1.44677833618517,1.10031549277787,1.66176135211674,0.2249738915515,0,0,1.34173875039706,0.315222829196793,1.57363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0.78602152549833,0.414239055347196,0,0,0.243585196761792,0,0,0,0,0,0.942324577501406,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0.675769762612291,1.28120759293973,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.196295437002051,8.25788063434183,0.733714394086716,0.577628330751691,0,0,0,0.0752103283492573,0,0,0.785720083444267,0.163771917510097,2.06998520703863,0,0,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0.175871244359621,0.127762427639595,0,0.336283722218824,3.64179362541979,0.91064876540519,1.24183318227694,0,0,0.0679697329768317,0.197318320688547,0.827356886187777,0.333694205676207,0.39246546425257,0,0.560544326627578,0,1.51149313853035,0.47775168788705,0.0714765441766563,0,0.116241425368125,0,0,0.414432328326074,0,0,0.430227358820278,0.118332000730565,0,2.54032230114557,0.22910686854405,0,0,0.894843454382338,0.196300467230486,0.731507549893617,0,0,0,0.485710993059139,0.233939463462106,0.596852325484105,0,0.79062257427272,0.329821550236287,0.754814217833368,0.385870790539723,0.437119121007915,0.470317296361523,0,0.235676547101626,0,0,0,0.339854229375634,0,0.193373663920732,0,2.14264726326789,0,0.401206833445841,0,0,0,0,0.271965960763659,0,1.5870805215462,0,0,0,0.126166424835079,0.327796715891087,0.380095503034311,0.61193297845189,4.54269588951453,0.275684698604535,1.25353769646188,0.227336094654718,0,0,0,0.852935927603924,0.23806443146374,0.0645889098360061,0.0620747142958579,0,1.33659032384146,0.202117188958219,0,0.342233301085281,0.5388164241167,0.860666464712116,0.99798106963804,0.814032686109745,0.106727345877715,0,0.179650404213174,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.175669571386252,0.130979075497713,1.45718115317017,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,1.58565817968474,0.927708378250397,2.09149097165133,1.14027160516907,1.00928340350251,1.82488679537915,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0.301586917234893,0.555530670951178,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.671928512795438,0.283550194484773,0.53735113621709,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0.791951872933429,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,1.20956117331872,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0,1.30926073077505,3.13739907670742,4.38417673959782,1.16106791782163,0,0,0.431831832204279,0,0.812839312631559,5.01689773854853,0.764628819135115,0,2.0148727924996,0,0,0.512900250232778,0.328014645699706,0.650756789328606,0.9273691048295,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.638063562472921,0.6069466851333,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,1.08890984861323,1.50630081242847,1.29151611801369,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,0.47748896947538,0.890894042497916,1.53580351049616,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.269605053441981,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,1.48681999993533,0,0.227586896570999,0.508507300585533,0.472775363535873,0,0.874813840149763,0.347249989866585,0,0,1.52581736317083,1.10579259931225,1.47773809476774,0,0,1.11538995422883,0.230850775511391,0,0.23056390438806,1.07709173291727,0.651884231532048,0.957003479195758,0.366390373607449,2.13213910407454,0,0,0,0.451191321234361,0.784250137270958,0,0,0,4.43095935508857,2.77495773870551,0.989471500037586,0.432777279484182,2.98578579323551,0.176915129006678,0,0,0,0,0,0,0,0,2.34797542718508,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.520679215005393,0.0979923974143777,0.261177619741208,0.52418000472609,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,1.16386819786103,0.176512253383001,0.225980740780532,0,0,0.189932387867636,0,0.320635281006135,0.426905989478705,0,0.144090417154106,0,0,0,0,0.707082103850386,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.741742725430498,0.404421263125109,0.0984274815147488,0,0,0,1.44677833618517,1.10031549277787,1.66176135211674,0.2249738915515,0,0,1.34173875039706,0.315222829196793,1.57363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0.78602152549833,0.414239055347196,0,0,0.243585196761792,0,0,0,0,0,0.942324577501406,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0.617602894321944,0.438568099157414,0,0,0.675769762612291,1.28120759293973,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.196295437002051,8.25788063434183,0.733714394086716,0.577628330751691,0,0,0,0.0752103283492573,0,0,0.785720083444267,0.163771917510097,2.06998520703863,0,0,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0.175871244359621,0.127762427639595,0,0.336283722218824,3.64179362541979,0.91064876540519,1.24183318227694,0,0,0.0679697329768317,0.197318320688547,0.827356886187777,0.333694205676207,0.39246546425257,0,0.560544326627578,0,1.51149313853035,0.47775168788705,0.0714765441766563,0,0.116241425368125,0,0,0.414432328326074,0,0,0.430227358820278,0.118332000730565,0,2.54032230114557,0.22910686854405,0,0,0.894843454382338,0.196300467230486,0.731507549893617,0,0,0,0.485710993059139,0.233939463462106,0.596852325484105,0,0.79062257427272,0.329821550236287,0.754814217833368,0.385870790539723,0.437119121007915,0.470317296361523,0,0.235676547101626,0,0,0,0.339854229375634,0,0.193373663920732,0,2.14264726326789,0,0.401206833445841,0,0,0,0,0.271965960763659,0,1.5870805215462,0,0,0,0.126166424835079,0.327796715891087,0.380095503034311,0.61193297845189,4.54269588951453,0.275684698604535,1.25353769646188,0.227336094654718,0,0,0,0.852935927603924,0.23806443146374,0.0645889098360061,0.0620747142958579,0,1.33659032384146,0.202117188958219,0,0.342233301085281,0.5388164241167,0.860666464712116,0.99798106963804,0.814032686109745,0.106727345877715,0,0.179650404213174,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p4@GRB7 | |||
}} | }} |
Latest revision as of 22:42, 19 September 2015
Short description: | p4@GRB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRB7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_005310_5end |
EntrezGene: | GRB7 |
HGNC: | 4567 |
UniProt: | Q14451 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.70e-14 | 10 |
nephron tubule epithelial cell | 3.70e-14 | 10 |
embryonic stem cell | 1.71e-12 | 5 |
kidney cell | 9.03e-11 | 17 |
kidney epithelial cell | 9.03e-11 | 17 |
epithelial cell of nephron | 3.29e-09 | 15 |
corneal epithelial cell | 9.40e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.70e-14 | 10 |
urinary system structure | 2.10e-11 | 47 |
renal system | 4.16e-11 | 48 |
kidney | 4.91e-11 | 26 |
kidney mesenchyme | 4.91e-11 | 26 |
upper urinary tract | 4.91e-11 | 26 |
kidney rudiment | 4.91e-11 | 26 |
kidney field | 4.91e-11 | 26 |
nephron epithelium | 3.29e-09 | 15 |
renal tubule | 3.29e-09 | 15 |
nephron tubule | 3.29e-09 | 15 |
nephron | 3.29e-09 | 15 |
uriniferous tubule | 3.29e-09 | 15 |
nephrogenic mesenchyme | 3.29e-09 | 15 |
cavitated compound organ | 5.49e-09 | 31 |
excretory tube | 1.37e-08 | 16 |
kidney epithelium | 1.37e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.41e-09 | 2 |