FFCP PHASE1:Hg19::chr3:121312289..121312298,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51725 | |EntrezGene=51725 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29816 | |HGNC=29816 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UH90 | |UniProt=Q9UH90 | ||
|association_with_transcript=119bp_to_NM_016298,uc003eeg.2_5end | |association_with_transcript=119bp_to_NM_016298,uc003eeg.2_5end | ||
|cluster_id=chr3:121312289..121312298,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_FBXO40_5end | |description=CAGE_peak_2_at_FBXO40_5end | ||
|id=chr3:121312289..121312298,+ | |id=chr3:121312289..121312298,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;4.72e-17;1!UBERON:0004140;5.98e-17;1!UBERON:0010226;1.31e-16;1!UBERON:0005062;2.35e-16;4!UBERON:0007284;2.35e-16;4!UBERON:0008814;6.94e-09;2!UBERON:0010056;6.94e-09;2!UBERON:0003104;9.43e-08;31 | |||
|ontology_enrichment_disease=DOID:114!1.36e-12!2;DOID:178!4.69e-07!1;DOID:326!4.69e-07!1;DOID:3978!4.69e-07!1;DOID:3394!4.69e-07!1;DOID:5844!4.69e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;1.48e-31;2!DOID:178;1.93e-16;1!DOID:326;1.93e-16;1!DOID:3978;1.93e-16;1!DOID:3394;1.93e-16;1!DOID:5844;1.93e-16;1!DOID:1287;2.54e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.37e-31,2;DOID:178,1.65e-16,1;DOID:326,1.65e-16,1;DOID:3978,1.65e-16,1;DOID:3394,1.65e-16,1;DOID:5844,1.65e-16,1;DOID:1287,2.44e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.00e-36!115;UBERON:0000200!4.05e-22!6;UBERON:0002771!1.36e-16!3;UBERON:0001950!6.29e-15!20;UBERON:0002619!1.58e-13!22;UBERON:0007100!1.60e-12!27;UBERON:0001630!3.00e-12!2;UBERON:0005090!3.00e-12!2;UBERON:0001870!6.17e-12!2;UBERON:0000956!7.81e-12!25;UBERON:0000203!7.81e-12!25;UBERON:0003103!3.36e-11!69;UBERON:0003075!4.27e-09!86;UBERON:0007284!4.27e-09!86;UBERON:0001869!4.46e-09!32;UBERON:0001049!6.50e-09!57;UBERON:0005068!6.50e-09!57;UBERON:0006241!6.50e-09!57;UBERON:0007135!6.50e-09!57;UBERON:0005743!7.77e-09!86;UBERON:0002791!8.91e-09!33;UBERON:0004151!9.70e-09!3;UBERON:0003978!1.13e-08!3;UBERON:0009751!1.13e-08!3;UBERON:0000946!1.13e-08!3;UBERON:0002523!1.13e-08!3;UBERON:0005983!1.13e-08!3;UBERON:0002165!1.13e-08!3;UBERON:0002062!1.13e-08!3;UBERON:0007280!1.13e-08!3;UBERON:0002346!1.42e-08!90;UBERON:0001723!1.70e-08!3;UBERON:0001033!1.70e-08!3;UBERON:0010056!1.70e-08!3;UBERON:0002020!1.71e-08!34;UBERON:0003528!1.71e-08!34;UBERON:0001893!1.71e-08!34;UBERON:0001017!5.47e-08!82;UBERON:0000073!9.16e-08!94;UBERON:0001016!9.16e-08!94;UBERON:0002079!2.95e-07!1;UBERON:0002146!3.52e-07!1;UBERON:0005623!3.52e-07!1;UBERON:0004121!3.61e-07!169;UBERON:0002084!4.18e-07!1;UBERON:0002082!4.18e-07!1;UBERON:0004706!4.18e-07!1;UBERON:0002135!4.43e-07!1;UBERON:0000153!4.75e-07!129;UBERON:0007811!4.75e-07!129;UBERON:0005418!5.26e-07!1;UBERON:0001389!5.26e-07!1;UBERON:0000026!5.26e-07!1;UBERON:0008784!5.26e-07!1;UBERON:0006058!5.26e-07!1;UBERON:0003663!5.26e-07!1;UBERON:0001383!5.26e-07!1;UBERON:0004256!5.26e-07!1;UBERON:0002529!5.26e-07!1;UBERON:0004708!5.26e-07!1;UBERON:0002101!5.26e-07!1;UBERON:0004709!5.26e-07!1;UBERON:0003661!5.26e-07!1;UBERON:0002471!5.26e-07!1;UBERON:0004357!5.26e-07!1;UBERON:0009872!5.26e-07!1;UBERON:0004347!5.26e-07!1;UBERON:0005420!5.26e-07!1;UBERON:0005732!5.26e-07!1;UBERON:0006057!5.26e-07!1;UBERON:0000978!5.26e-07!1;UBERON:0002103!5.26e-07!1;UBERON:0001665!5.26e-07!1;UBERON:0003823!5.26e-07!1;UBERON:0000154!5.26e-07!1;UBERON:0005733!5.26e-07!1;UBERON:0005730!5.26e-07!1;UBERON:0002616!5.46e-07!59;UBERON:0002702!6.24e-07!1;UBERON:0000924!6.41e-07!173;UBERON:0006601!6.41e-07!173;UBERON:0002426!6.60e-07!1;UBERON:0003831!6.60e-07!1;UBERON:0003898!6.60e-07!1;UBERON:0004830!6.60e-07!1;UBERON:0001774!6.60e-07!1;UBERON:0003830!6.60e-07!1;UBERON:0005175!6.60e-07!1;UBERON:0003897!6.60e-07!1;UBERON:0001103!6.60e-07!1;UBERON:0010084!6.60e-07!1;UBERON:0000955!6.74e-07!69;UBERON:0006238!6.74e-07!69;UBERON:0002780!6.90e-07!41;UBERON:0001890!6.90e-07!41;UBERON:0006240!6.90e-07!41;UBERON:0000989!6.99e-07!1;UBERON:0008811!6.99e-07!1;UBERON:0006258!6.99e-07!1;UBERON:0005876!6.99e-07!1;UBERON:0004874!6.99e-07!1;UBERON:0002372!7.39e-07!1;UBERON:0001961!7.39e-07!1;UBERON:0001744!7.39e-07!1;UBERON:0001735!7.39e-07!1;UBERON:0001301!9.25e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.15e-38;25!UBERON:0004151;1.36e-21;3!UBERON:0003978;1.86e-21;3!UBERON:0000946;1.86e-21;3!UBERON:0001723;5.75e-21;3!UBERON:0001033;5.75e-21;3!UBERON:0000948;1.37e-17;22!UBERON:0002079;4.72e-17;1!UBERON:0002146;7.57e-17;1!UBERON:0005623;7.57e-17;1!UBERON:0002084;1.31e-16;1!UBERON:0002135;1.31e-16;1!UBERON:0002082;1.31e-16;1!UBERON:0001389;1.93e-16;1!UBERON:0000026;1.93e-16;1!UBERON:0008784;1.93e-16;1!UBERON:0006058;1.93e-16;1!UBERON:0003663;1.93e-16;1!UBERON:0004256;1.93e-16;1!UBERON:0004708;1.93e-16;1!UBERON:0002101;1.93e-16;1!UBERON:0004709;1.93e-16;1!UBERON:0002529;1.93e-16;1!UBERON:0010538;1.93e-16;1!UBERON:0003661;1.93e-16;1!UBERON:0010890;1.93e-16;1!UBERON:0002471;1.93e-16;1!UBERON:0001383;1.93e-16;1!UBERON:0010758;1.93e-16;1!UBERON:0010707;1.93e-16;1!UBERON:0000978;1.93e-16;1!UBERON:0002103;1.93e-16;1!UBERON:0001665;1.93e-16;1!UBERON:0003823;1.93e-16;1!UBERON:0000154;1.93e-16;1!UBERON:0010709;1.93e-16;1!UBERON:0002081;3.43e-09;2!UBERON:0000341;4.89e-09;2!UBERON:0002133;5.71e-09;2!UBERON:0005090;6.94e-09;2!UBERON:0001630;6.94e-09;2!UBERON:0003103;7.55e-08;61!UBERON:0010313;4.32e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.80e-36,27;UBERON:0004151,1.29e-21,3;UBERON:0003103,1.31e-21,68;UBERON:0003978,1.96e-21,3;UBERON:0009751,1.96e-21,3;UBERON:0000946,1.96e-21,3;UBERON:0002523,1.96e-21,3;UBERON:0005983,1.96e-21,3;UBERON:0002165,1.96e-21,3;UBERON:0002062,1.96e-21,3;UBERON:0007280,1.96e-21,3;UBERON:0001723,6.05e-21,3;UBERON:0001033,6.05e-21,3;UBERON:0010056,6.05e-21,3;UBERON:0002079,4.72e-17,1;UBERON:0002146,7.57e-17,1;UBERON:0005623,7.57e-17,1;UBERON:0002084,1.21e-16,1;UBERON:0002082,1.21e-16,1;UBERON:0010226,1.21e-16,1;UBERON:0002135,1.41e-16,1;UBERON:0005418,2.25e-16,1;UBERON:0001389,2.25e-16,1;UBERON:0000026,2.25e-16,1;UBERON:0008784,2.25e-16,1;UBERON:0006058,2.25e-16,1;UBERON:0003663,2.25e-16,1;UBERON:0004256,2.25e-16,1;UBERON:0004708,2.25e-16,1;UBERON:0002101,2.25e-16,1;UBERON:0004709,2.25e-16,1;UBERON:0002529,2.25e-16,1;UBERON:0010538,2.25e-16,1;UBERON:0003661,2.25e-16,1;UBERON:0010890,2.25e-16,1;UBERON:0002471,2.25e-16,1;UBERON:0001383,2.25e-16,1;UBERON:0004357,2.25e-16,1;UBERON:0004347,2.25e-16,1;UBERON:0005420,2.25e-16,1;UBERON:0005732,2.25e-16,1;UBERON:0010758,2.25e-16,1;UBERON:0010707,2.25e-16,1;UBERON:0000978,2.25e-16,1;UBERON:0002103,2.25e-16,1;UBERON:0001665,2.25e-16,1;UBERON:0003823,2.25e-16,1;UBERON:0000154,2.25e-16,1;UBERON:0010709,2.25e-16,1;UBERON:0005733,2.25e-16,1;UBERON:0005730,2.25e-16,1;UBERON:0000948,3.87e-16,24;UBERON:0005498,3.87e-16,24;UBERON:0004140,3.87e-16,24;UBERON:0009881,3.87e-16,24;UBERON:0004141,3.87e-16,24;UBERON:0003084,3.87e-16,24;UBERON:0007005,3.87e-16,24;UBERON:0004139,3.87e-16,24;UBERON:0004291,3.87e-16,24;UBERON:0007023,3.21e-15,114;UBERON:0004797,9.52e-10,7;UBERON:0002081,3.43e-09,2;UBERON:0010227,3.43e-09,2;UBERON:0000341,4.70e-09,2;UBERON:0002133,5.94e-09,2;UBERON:0005090,7.49e-09,2;UBERON:0001630,7.49e-09,2;UBERON:0001009,3.66e-08,112;UBERON:0010313,4.39e-07,10;UBERON:0002342,4.39e-07,10;UBERON:0005062,4.39e-07,10;UBERON:0001042,6.12e-07,10;UBERON:0009145,6.12e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02708322290058,7.56229399238556,0,3.79390100948083,11.5891032996874,6.02562935093056,11.6899242126904,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,12.1498205483472,5.95882773328889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23714418593947,1.43727929598746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39701945702943,0,0,0,0,0.0636471582781649,0,3.48346796635138,1.02669990325584,0.336760265072938,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02708322290058,7.56229399238556,0,3.79390100948083,11.5891032996874,6.02562935093056,11.6899242126904,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,12.1498205483472,5.95882773328889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23714418593947,1.43727929598746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39701945702943,0,0,0,0,0.0636471582781649,0,3.48346796635138,1.02669990325584,0.336760265072938,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@FBXO40 | |short_description=p2@FBXO40 | ||
}} | }} |
Latest revision as of 22:41, 19 September 2015
Short description: | p2@FBXO40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FBXO40_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 119bp_to_NM_016298, uc003eeg.2_5end |
EntrezGene: | FBXO40 |
HGNC: | 29816 |
UniProt: | Q9UH90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.37e-31 | 2 |
vascular disease | 1.65e-16 | 1 |
ischemia | 1.65e-16 | 1 |
extrinsic cardiomyopathy | 1.65e-16 | 1 |
myocardial ischemia | 1.65e-16 | 1 |
myocardial infarction | 1.65e-16 | 1 |
cardiovascular system disease | 2.44e-16 | 4 |