FFCP PHASE1:Hg19::chr1:20306920..20306936,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5320 | |EntrezGene=5320 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9031 | |HGNC=9031 | ||
|TSSclassifier=strong | |||
|UniProt=P14555 | |UniProt=P14555 | ||
|association_with_transcript=0bp_to_ENST00000400520,NM_000300,NM_001161727,NM_001161728,uc001bcv.2,uc010oda.1,uc010odb.1_5end | |association_with_transcript=0bp_to_ENST00000400520,NM_000300,NM_001161727,NM_001161728,uc001bcv.2,uc010oda.1,uc010odb.1_5end | ||
|cluster_id=chr1:20306920..20306936,- | |||
|description=CAGE_peak_4_at_PLA2G2A_5end | |description=CAGE_peak_4_at_PLA2G2A_5end | ||
|id=chr1:20306920..20306936,- | |id=chr1:20306920..20306936,- | ||
|ontology_enrichment_celltype=CL:0000181!6.58e-08!12;CL:0000417!6.58e-08!12;CL:0000668!6.58e-08!12;CL:0000414!6.58e-08!12;CL:0000412!6.58e-08!12;CL:0000182!6.58e-08!12 | |ontology_enrichment_celltype=CL:0000181!6.58e-08!12;CL:0000417!6.58e-08!12;CL:0000668!6.58e-08!12;CL:0000414!6.58e-08!12;CL:0000412!6.58e-08!12;CL:0000182!6.58e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002563;2.85e-10;4 | |ontology_enrichment_celltype_v019=CL:0002563;2.85e-10;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.60e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.30e-11;1 | |ontology_enrichment_development_v019=UBERON:0003124;5.30e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!2.27e-15!129;UBERON:0004185!2.27e-15!129;UBERON:0001007!3.99e-14!155;UBERON:0001555!3.99e-14!155;UBERON:0007026!3.99e-14!155;UBERON:0004119!1.44e-13!169;UBERON:0000925!1.44e-13!169;UBERON:0006595!1.44e-13!169;UBERON:0000059!5.97e-13!11;UBERON:0000160!9.94e-13!27;UBERON:0007023!6.73e-12!115;UBERON:0005409!2.04e-11!35;UBERON:0001155!3.24e-11!9;UBERON:0000077!3.50e-10!130;UBERON:0009497!1.08e-08!25;UBERON:0000015!1.08e-08!25;UBERON:0002423!1.08e-08!25;UBERON:0006235!1.08e-08!25;UBERON:0004161!1.08e-08!25;UBERON:0003127!2.79e-08!2;UBERON:0003929!5.62e-08!54;UBERON:0004907!7.27e-08!5;UBERON:0009854!2.88e-07!23;UBERON:0001046!3.76e-07!19 | |ontology_enrichment_uberon=UBERON:0004921!2.27e-15!129;UBERON:0004185!2.27e-15!129;UBERON:0001007!3.99e-14!155;UBERON:0001555!3.99e-14!155;UBERON:0007026!3.99e-14!155;UBERON:0004119!1.44e-13!169;UBERON:0000925!1.44e-13!169;UBERON:0006595!1.44e-13!169;UBERON:0000059!5.97e-13!11;UBERON:0000160!9.94e-13!27;UBERON:0007023!6.73e-12!115;UBERON:0005409!2.04e-11!35;UBERON:0001155!3.24e-11!9;UBERON:0000077!3.50e-10!130;UBERON:0009497!1.08e-08!25;UBERON:0000015!1.08e-08!25;UBERON:0002423!1.08e-08!25;UBERON:0006235!1.08e-08!25;UBERON:0004161!1.08e-08!25;UBERON:0003127!2.79e-08!2;UBERON:0003929!5.62e-08!54;UBERON:0004907!7.27e-08!5;UBERON:0009854!2.88e-07!23;UBERON:0001046!3.76e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.27e-41;17!UBERON:0005409;2.43e-32;22!UBERON:0004921;1.09e-24;33!UBERON:0000059;1.06e-21;11!UBERON:0002108;7.88e-18;4!UBERON:0001155;3.08e-17;9!UBERON:0002372;5.30e-11;1!UBERON:0001961;5.30e-11;1!UBERON:0001744;5.30e-11;1!UBERON:0001042;5.30e-11;1!UBERON:0001735;5.30e-11;1!UBERON:0001052;1.91e-10;4!UBERON:0001007;2.01e-10;81!UBERON:0001242;2.85e-10;4!UBERON:0001262;2.85e-10;4!UBERON:0004786;2.85e-10;4!UBERON:0004808;2.85e-10;4!UBERON:0001277;2.85e-10;4!UBERON:0001555;1.63e-09;54!UBERON:0004907;1.57e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.27e-41;17!UBERON:0005409;2.43e-32;22!UBERON:0004921;1.09e-24;33!UBERON:0000059;1.06e-21;11!UBERON:0002108;7.88e-18;4!UBERON:0001155;3.08e-17;9!UBERON:0002372;5.30e-11;1!UBERON:0001961;5.30e-11;1!UBERON:0001744;5.30e-11;1!UBERON:0001042;5.30e-11;1!UBERON:0001735;5.30e-11;1!UBERON:0001052;1.91e-10;4!UBERON:0001007;2.01e-10;81!UBERON:0001242;2.85e-10;4!UBERON:0001262;2.85e-10;4!UBERON:0004786;2.85e-10;4!UBERON:0004808;2.85e-10;4!UBERON:0001277;2.85e-10;4!UBERON:0001555;1.63e-09;54!UBERON:0004907;1.57e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.12e-41,17;UBERON:0005409,1.62e-28,25;UBERON:0000059,9.90e-22,11;UBERON:0002108,7.44e-18,4;UBERON:0001155,2.95e-17,9;UBERON:0004921,1.24e-15,118;UBERON:0004119,1.59e-14,160;UBERON:0000925,1.59e-14,160;UBERON:0006595,1.59e-14,160;UBERON:0001007,3.12e-14,145;UBERON:0001555,3.12e-14,145;UBERON:0007026,3.12e-14,145;UBERON:0001046,1.82e-12,19;UBERON:0002372,5.05e-11,1;UBERON:0001961,5.05e-11,1;UBERON:0001744,5.05e-11,1;UBERON:0001735,5.05e-11,1;UBERON:0001052,1.69e-10,4;UBERON:0001242,2.60e-10,4;UBERON:0001262,2.60e-10,4;UBERON:0004786,2.60e-10,4;UBERON:0004808,2.60e-10,4;UBERON:0001277,2.60e-10,4;UBERON:0004907,1.43e-08,5;UBERON:0011216,3.61e-08,223;UBERON:0003929,5.90e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,2.33678033231916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,1.57829449019094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,5.97157158647103,2.21143911258348,9.16545217400438,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,5.19755703795225,0,0,0,10.950877433149,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.201550417460179,0,2.32991899054908,0.630265458457789,0.329663433524666,0.606631894687664,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.752103283492572,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,4.16901139764402,0,0,0,0,0,0,9.26218495636065,0,0,5.47895232305697,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.490751168076215,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,3.93588206350518,5.02686989159102,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,4.64729165800654,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,2.33678033231916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50492403815704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,1.57829449019094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,5.97157158647103,2.21143911258348,9.16545217400438,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,5.19755703795225,0,0,0,10.950877433149,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.201550417460179,0,2.32991899054908,0.630265458457789,0.329663433524666,0.606631894687664,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.752103283492572,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,4.16901139764402,0,0,0,0,0,0,9.26218495636065,0,0,5.47895232305697,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.490751168076215,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,3.93588206350518,5.02686989159102,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,4.64729165800654,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@PLA2G2A | |short_description=p4@PLA2G2A | ||
}} | }} |
Latest revision as of 21:49, 19 September 2015
Short description: | p4@PLA2G2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLA2G2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000400520, NM_000300, NM_001161727, NM_001161728, uc001bcv.2, uc010oda.1, uc010odb.1_5end |
EntrezGene: | PLA2G2A |
HGNC: | 9031 |
UniProt: | P14555 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.60e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.12e-41 | 17 |
gastrointestinal system | 1.62e-28 | 25 |
large intestine | 9.90e-22 | 11 |
small intestine | 7.44e-18 | 4 |
colon | 2.95e-17 | 9 |
subdivision of digestive tract | 1.24e-15 | 118 |
endoderm-derived structure | 1.59e-14 | 160 |
endoderm | 1.59e-14 | 160 |
presumptive endoderm | 1.59e-14 | 160 |
digestive system | 3.12e-14 | 145 |
digestive tract | 3.12e-14 | 145 |
primitive gut | 3.12e-14 | 145 |
hindgut | 1.82e-12 | 19 |
tonsil | 5.05e-11 | 1 |
mucosa-associated lymphoid tissue | 5.05e-11 | 1 |
lymphoid tissue | 5.05e-11 | 1 |
tonsillar ring | 5.05e-11 | 1 |
rectum | 1.69e-10 | 4 |
intestinal mucosa | 2.60e-10 | 4 |
wall of intestine | 2.60e-10 | 4 |
gastrointestinal system mucosa | 2.60e-10 | 4 |
gastrointestinal system epithelium | 2.60e-10 | 4 |
intestinal epithelium | 2.60e-10 | 4 |
lower digestive tract | 1.43e-08 | 5 |
organ system subdivision | 3.61e-08 | 223 |
gut epithelium | 5.90e-08 | 54 |