FFCP PHASE1:Hg19::chr1:20306102..20306119,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:20306102..20306119,- to FFCP PHASE1:Hg19::chr1:20306102..20306119,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5320 | |EntrezGene=5320 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9031 | |HGNC=9031 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000496748_5end | |||
|cluster_id=chr1:20306102..20306119,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_PLA2G2A_5end | |||
|id=chr1:20306102..20306119,- | |||
|ontology_enrichment_celltype=CL:0000136!3.84e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.94e-16;13!CL:0000182;5.43e-08;12!CL:0002322;3.30e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.00e-13,15;CL:0000182,5.14e-08,12;CL:0002322,3.30e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.65e-11;31!UBERON:0004161;1.92e-08;11!UBERON:0006603;4.25e-07;65!UBERON:0004872;5.16e-07;7!UBERON:0009497;7.58e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.33e-30!115;UBERON:0002530!7.36e-09!59;UBERON:0002368!1.14e-08!35;UBERON:0004921!8.56e-08!129;UBERON:0004185!8.56e-08!129;UBERON:0005057!2.43e-07!26;UBERON:0004457!5.16e-07!12;UBERON:0000042!5.16e-07!12;UBERON:0002417!7.52e-07!61;UBERON:0000916!7.52e-07!61;UBERON:0000468!7.97e-07!659;UBERON:0002107!9.52e-07!19;UBERON:0006925!9.52e-07!19;UBERON:0008836!9.52e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.92e-09;9!UBERON:0000042;9.92e-09;9!UBERON:0002107;2.25e-08;19!UBERON:0006925;2.25e-08;19!UBERON:0002368;5.10e-08;33!UBERON:0002423;7.33e-08;25!UBERON:0003688;1.58e-07;6!UBERON:0002358;1.58e-07;6!UBERON:0003684;1.58e-07;6!UBERON:0001178;1.58e-07;6!UBERON:0007023;2.74e-07;114!UBERON:0004921;2.98e-07;33!UBERON:0007100;3.37e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.09e-26,114;UBERON:0004921,5.48e-11,118;UBERON:0004457,2.10e-09,12;UBERON:0000042,2.10e-09,12;UBERON:0001007,4.85e-09,145;UBERON:0001555,4.85e-09,145;UBERON:0007026,4.85e-09,145;UBERON:0002107,2.12e-08,19;UBERON:0006925,2.12e-08,19;UBERON:0008836,2.12e-08,19;UBERON:0002417,3.64e-08,60;UBERON:0000916,3.64e-08,60;UBERON:0002368,3.91e-08,35;UBERON:0004119,3.98e-08,160;UBERON:0000925,3.98e-08,160;UBERON:0006595,3.98e-08,160;UBERON:0009497,6.96e-08,25;UBERON:0000015,6.96e-08,25;UBERON:0002423,6.96e-08,25;UBERON:0006235,6.96e-08,25;UBERON:0004161,6.96e-08,25;UBERON:0009854,1.30e-07,23;UBERON:0002530,1.45e-07,59;UBERON:0003688,1.53e-07,6;UBERON:0002358,1.53e-07,6;UBERON:0003684,1.53e-07,6;UBERON:0001178,1.53e-07,6;UBERON:0009569,1.57e-07,112;UBERON:0005409,3.42e-07,25;UBERON:0008835,7.65e-07,22;UBERON:0003894,7.65e-07,22 | |||
|phase1_expression=8.53888382571616,121.394997046187,52.8579015359892,28.0205235388765,60.7867088421111,333.233316206341,283.695863548508,5.05375898741465,540.915436001866,0,0,0,0,0,0,2.6893005858071,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87796785972314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,47.2211612054028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,112.151158504422,0.670700859703636,3.70801429346238,0,1.50401373190767,16.6573496804947,182.120481874702,1788.38314836219,0,0,0,10.7402841908124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.366403487860815,0,0,0,2.48485975847659,0.12663051166458,0,0.573673241497627,0,2.24271040056923,0,0,1.8672662123986,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,3.55621325001386,0,0,0,0,0,0,124.291206546058,16.0361019668997,48.4528741765892,84.8984040575884,64.8464586750365,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7009242946164,0,4582.19450880919,2987.79473869998,8405.75879226302,0,126.678091699407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0.621984346622316,0,28.2783050875091,0,0,0,76.9826007102174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,11.3820378421755,0,0.368738337083406,0,0,0,0,0,0,0,0,2.11673205330776,8.18755765801964,0.767309866440312,8.13914273855913,66.1198010159417,1.53512174720011,6.75586468803151,10.3892646511494,0,0,0,0,0.116210378459959,213.80036632758,0,0,2.06666006696292,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,178.363991162207,0,0,0,0,212.102787394291,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0.6196469961995,0,0,0,0,0,30.821714753459,1420.57816822902,0,0,0,0,0,179.720515682871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,386.928101457072,0,0,0,0,0,0,0,0,0,0.16480387422676,0,321.187757060724,23.2078489046164,0,0,0,0,0,0,0,595.608883235805,0,0,0,1.29875337426592,0,0,0,242.149858195221,0,0,0,0,0,2.43074992906609,0,0.120596438625408,0,0.774054819518572,0,0.87754158861589,0,0,29.0871977144353,3.98797195464504,0,0,0,1.5950057986596,0,3.19820865611181,0,0,0,0,0,0,0,0,0,0,13.4285417862244,0,93.5546215213795,999.747394016739,129.538390725929,0,0,0,0.404406797884062,42.5366153068358,0,0,0,0,8.68085686268659,225.042731850515,0,2386.49392598836,0.450970258243478,0,0,0,0,0,0,0,0,3.82170349916073,0.0870592065804026,378.108510075753,0,0,0,0,483.393258178282,0,1167.19052613145,0,0,0.189932387867636,10.5597746676794,0,26.2547183529404,1.79828648623917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,859.072666313454,17.8745130729113,4653.97081833149,244.407096610765,545.975533229718,1812.82174880033,122.475470343302,0,61.7428532495505,8.6661500537946,7.74709068782965,6.60554729771012,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0.77380195455795,0.728994679896296,0,29.5521402371993,4.61600375587983,0,0,0.191915197319445,1624.50247684666,1401.64870126362,0.25426853765475,0,0,0,0,0,0,1.13312091520126,4783.75801171997,478.349868973119,0.129282956361551,0,0.171086837884329,0,52.3258321581704,13.8339788487706,7.87054205159671,100.721702427826,0,0,0,106.083471657047,42.1159021958136,91.9036730290385,73.4434692789962,0.314108192500469,0,0,0,0,0.332787154610557,4.47094101177961,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,2.77402930751307,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,1.53498834705095,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0,0,0.834979926253974,0,0,0,0.252071696221718,0.276629009856872,0,2.85538840518309,0,0,0,0,0,0.690359926060101,0.397832444232549,531.210549130804,0,46.1093266627525,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,10.4168975702865,97.753602142691,0,0,4.28561468702629,0.672567444437648,12.1393120847326,2.27662191351298,213.77271209196,0,2.7438081509987,0.339848664884159,0.131545547125698,0,0,436.971047898812,0,0.560544326627578,21.0026505717184,0,0,108.429917515988,0,0,0,4.81026818838152,0,0.17071847709395,0,27.1043236056775,0,0,3.38709640152743,0,0,0,0,0.490751168076215,0,122.364050228512,468.86103891248,5.799072156691,94.2279326534731,0,0,0,0,0.109940516745429,0,1406.80772814972,5.46398901259893,0,599.877943331807,0,0.196308467114945,0.594092800654172,14.3702947378356,0.169927114687817,4.13529239111356,10.1843462998252,0,0,0,0,21.9100916473955,9.17458566809082,0.143339583151451,0,0.0679914901909147,0,205.262414119975,0.371995018166751,452.007764801527,44.5605358987503,0,1.20192129160065,0,0.203977659483963,0,0.36757959813938,0,216.196626016637,6.43113912374828,0,0,104.058183167679,0.476128862927481,0.581300188524055,29.2371904333491,0,229.575299909341,1.41482032270754,150.877706292594,5.4757328173645,283.35008703237,1210.95771584995,48.2357516991719,0,0,0,0,183.019935074694,5.37862354404612,0.813792356631477,1165.74011159883,70.2445539632682,0 | |phase1_expression=8.53888382571616,121.394997046187,52.8579015359892,28.0205235388765,60.7867088421111,333.233316206341,283.695863548508,5.05375898741465,540.915436001866,0,0,0,0,0,0,2.6893005858071,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87796785972314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,47.2211612054028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,112.151158504422,0.670700859703636,3.70801429346238,0,1.50401373190767,16.6573496804947,182.120481874702,1788.38314836219,0,0,0,10.7402841908124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0.366403487860815,0,0,0,2.48485975847659,0.12663051166458,0,0.573673241497627,0,2.24271040056923,0,0,1.8672662123986,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,3.55621325001386,0,0,0,0,0,0,124.291206546058,16.0361019668997,48.4528741765892,84.8984040575884,64.8464586750365,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7009242946164,0,4582.19450880919,2987.79473869998,8405.75879226302,0,126.678091699407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0.621984346622316,0,28.2783050875091,0,0,0,76.9826007102174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,11.3820378421755,0,0.368738337083406,0,0,0,0,0,0,0,0,2.11673205330776,8.18755765801964,0.767309866440312,8.13914273855913,66.1198010159417,1.53512174720011,6.75586468803151,10.3892646511494,0,0,0,0,0.116210378459959,213.80036632758,0,0,2.06666006696292,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,178.363991162207,0,0,0,0,212.102787394291,0,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0.6196469961995,0,0,0,0,0,30.821714753459,1420.57816822902,0,0,0,0,0,179.720515682871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,386.928101457072,0,0,0,0,0,0,0,0,0,0.16480387422676,0,321.187757060724,23.2078489046164,0,0,0,0,0,0,0,595.608883235805,0,0,0,1.29875337426592,0,0,0,242.149858195221,0,0,0,0,0,2.43074992906609,0,0.120596438625408,0,0.774054819518572,0,0.87754158861589,0,0,29.0871977144353,3.98797195464504,0,0,0,1.5950057986596,0,3.19820865611181,0,0,0,0,0,0,0,0,0,0,13.4285417862244,0,93.5546215213795,999.747394016739,129.538390725929,0,0,0,0.404406797884062,42.5366153068358,0,0,0,0,8.68085686268659,225.042731850515,0,2386.49392598836,0.450970258243478,0,0,0,0,0,0,0,0,3.82170349916073,0.0870592065804026,378.108510075753,0,0,0,0,483.393258178282,0,1167.19052613145,0,0,0.189932387867636,10.5597746676794,0,26.2547183529404,1.79828648623917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,859.072666313454,17.8745130729113,4653.97081833149,244.407096610765,545.975533229718,1812.82174880033,122.475470343302,0,61.7428532495505,8.6661500537946,7.74709068782965,6.60554729771012,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0.77380195455795,0.728994679896296,0,29.5521402371993,4.61600375587983,0,0,0.191915197319445,1624.50247684666,1401.64870126362,0.25426853765475,0,0,0,0,0,0,1.13312091520126,4783.75801171997,478.349868973119,0.129282956361551,0,0.171086837884329,0,52.3258321581704,13.8339788487706,7.87054205159671,100.721702427826,0,0,0,106.083471657047,42.1159021958136,91.9036730290385,73.4434692789962,0.314108192500469,0,0,0,0,0.332787154610557,4.47094101177961,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,2.77402930751307,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,1.53498834705095,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0,0,0.834979926253974,0,0,0,0.252071696221718,0.276629009856872,0,2.85538840518309,0,0,0,0,0,0.690359926060101,0.397832444232549,531.210549130804,0,46.1093266627525,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,10.4168975702865,97.753602142691,0,0,4.28561468702629,0.672567444437648,12.1393120847326,2.27662191351298,213.77271209196,0,2.7438081509987,0.339848664884159,0.131545547125698,0,0,436.971047898812,0,0.560544326627578,21.0026505717184,0,0,108.429917515988,0,0,0,4.81026818838152,0,0.17071847709395,0,27.1043236056775,0,0,3.38709640152743,0,0,0,0,0.490751168076215,0,122.364050228512,468.86103891248,5.799072156691,94.2279326534731,0,0,0,0,0.109940516745429,0,1406.80772814972,5.46398901259893,0,599.877943331807,0,0.196308467114945,0.594092800654172,14.3702947378356,0.169927114687817,4.13529239111356,10.1843462998252,0,0,0,0,21.9100916473955,9.17458566809082,0.143339583151451,0,0.0679914901909147,0,205.262414119975,0.371995018166751,452.007764801527,44.5605358987503,0,1.20192129160065,0,0.203977659483963,0,0.36757959813938,0,216.196626016637,6.43113912374828,0,0,104.058183167679,0.476128862927481,0.581300188524055,29.2371904333491,0,229.575299909341,1.41482032270754,150.877706292594,5.4757328173645,283.35008703237,1210.95771584995,48.2357516991719,0,0,0,0,183.019935074694,5.37862354404612,0.813792356631477,1165.74011159883,70.2445539632682,0 | ||
|short_description=p1@PLA2G2A | |||
}} | }} |
Latest revision as of 21:49, 19 September 2015
Short description: | p1@PLA2G2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLA2G2A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000496748_5end |
EntrezGene: | PLA2G2A |
HGNC: | 9031 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.00e-13 | 15 |
hepatocyte | 5.14e-08 | 12 |
embryonic stem cell | 3.30e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.09e-26 | 114 |
subdivision of digestive tract | 5.48e-11 | 118 |
cavity lining | 2.10e-09 | 12 |
serous membrane | 2.10e-09 | 12 |
digestive system | 4.85e-09 | 145 |
digestive tract | 4.85e-09 | 145 |
primitive gut | 4.85e-09 | 145 |
liver | 2.12e-08 | 19 |
digestive gland | 2.12e-08 | 19 |
liver bud | 2.12e-08 | 19 |
abdominal segment of trunk | 3.64e-08 | 60 |
abdomen | 3.64e-08 | 60 |
endocrine gland | 3.91e-08 | 35 |
endoderm-derived structure | 3.98e-08 | 160 |
endoderm | 3.98e-08 | 160 |
presumptive endoderm | 3.98e-08 | 160 |
epithelium of foregut-midgut junction | 6.96e-08 | 25 |
anatomical boundary | 6.96e-08 | 25 |
hepatobiliary system | 6.96e-08 | 25 |
foregut-midgut junction | 6.96e-08 | 25 |
septum transversum | 6.96e-08 | 25 |
digestive tract diverticulum | 1.30e-07 | 23 |
gland | 1.45e-07 | 59 |
omentum | 1.53e-07 | 6 |
peritoneum | 1.53e-07 | 6 |
abdominal cavity | 1.53e-07 | 6 |
visceral peritoneum | 1.53e-07 | 6 |
subdivision of trunk | 1.57e-07 | 112 |
gastrointestinal system | 3.42e-07 | 25 |
hepatic diverticulum | 7.65e-07 | 22 |
liver primordium | 7.65e-07 | 22 |