FFCP PHASE1:Hg19::chr17:37322317..37322337,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390790 | |EntrezGene=390790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31111 | |HGNC=31111 | ||
|TSSclassifier=strong | |||
|UniProt=A6NH57 | |UniProt=A6NH57 | ||
|association_with_transcript=76bp_to_ENST00000269586,NM_001143968,uc010wea.1_5end | |association_with_transcript=76bp_to_ENST00000269586,NM_001143968,uc010wea.1_5end | ||
|cluster_id=chr17:37322317..37322337,- | |||
|coexpression_cluster_id=C1213 | |||
|description=CAGE_peak_2_at_ARL5C_5end | |description=CAGE_peak_2_at_ARL5C_5end | ||
|id=chr17:37322317..37322337,- | |id=chr17:37322317..37322337,- | ||
|ontology_enrichment_celltype=CL:0000784!1.63e-18!3;CL:0002619!9.43e-09!3 | |ontology_enrichment_celltype=CL:0000784!1.63e-18!3;CL:0002619!9.43e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.75e-53;3!CL:0000451;2.17e-15;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.39e-53,3;CL:0000451,2.51e-15,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.98e-09!57;UBERON:0005068!2.98e-09!57;UBERON:0006241!2.98e-09!57;UBERON:0007135!2.98e-09!57;UBERON:0007023!7.37e-09!115;UBERON:0004177!5.97e-08!7;UBERON:0002616!2.94e-07!59;UBERON:0002780!4.16e-07!41;UBERON:0001890!4.16e-07!41;UBERON:0006240!4.16e-07!41;UBERON:0002370!6.03e-07!4;UBERON:0005058!6.03e-07!4;UBERON:0009113!6.03e-07!4;UBERON:0003295!6.03e-07!4;UBERON:0005562!6.03e-07!4;UBERON:0003080!6.47e-07!42;UBERON:0001301!6.76e-07!1;UBERON:0001882!8.49e-07!1;UBERON:0005403!8.49e-07!1;UBERON:0002022!8.98e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!2.98e-09!57;UBERON:0005068!2.98e-09!57;UBERON:0006241!2.98e-09!57;UBERON:0007135!2.98e-09!57;UBERON:0007023!7.37e-09!115;UBERON:0004177!5.97e-08!7;UBERON:0002616!2.94e-07!59;UBERON:0002780!4.16e-07!41;UBERON:0001890!4.16e-07!41;UBERON:0006240!4.16e-07!41;UBERON:0002370!6.03e-07!4;UBERON:0005058!6.03e-07!4;UBERON:0009113!6.03e-07!4;UBERON:0003295!6.03e-07!4;UBERON:0005562!6.03e-07!4;UBERON:0003080!6.47e-07!42;UBERON:0001301!6.76e-07!1;UBERON:0001882!8.49e-07!1;UBERON:0005403!8.49e-07!1;UBERON:0002022!8.98e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.91e-79;2!UBERON:0005058;1.91e-79;2!UBERON:0009113;1.91e-79;2!UBERON:0004177;1.33e-32;5!UBERON:0005057;1.33e-32;5!UBERON:0000077;6.72e-07;27!UBERON:0002405;6.72e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.81e-40,4;UBERON:0005058,1.81e-40,4;UBERON:0009113,1.81e-40,4;UBERON:0003295,1.81e-40,4;UBERON:0005562,1.81e-40,4;UBERON:0003351,2.08e-27,6;UBERON:0004177,1.14e-23,7;UBERON:0005057,1.14e-23,7;UBERON:0000974,6.39e-17,10;UBERON:0003408,6.39e-17,10;UBERON:0001042,6.39e-17,10;UBERON:0009145,6.39e-17,10;UBERON:0006562,1.74e-15,11;UBERON:0009722,1.74e-15,11;UBERON:0007690,1.74e-15,11;UBERON:0008814,7.10e-10,18;UBERON:0001557,2.08e-09,19 | |||
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|short_description=p2@ARL5C | |short_description=p2@ARL5C | ||
}} | }} |
Latest revision as of 21:15, 19 September 2015
Short description: | p2@ARL5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARL5C_5end |
Coexpression cluster: | C1213_thymus_Dendritic_CD4_non_chronic_vein_CD133 |
Association with transcript: | 76bp_to_ENST00000269586, NM_001143968, uc010wea.1_5end |
EntrezGene: | ARL5C |
HGNC: | 31111 |
UniProt: | A6NH57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.39e-53 | 3 |
dendritic cell | 2.51e-15 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.81e-40 | 4 |
hemolymphoid system gland | 1.81e-40 | 4 |
thymic region | 1.81e-40 | 4 |
pharyngeal gland | 1.81e-40 | 4 |
thymus primordium | 1.81e-40 | 4 |
pharyngeal epithelium | 2.08e-27 | 6 |
hemopoietic organ | 1.14e-23 | 7 |
immune organ | 1.14e-23 | 7 |
neck | 6.39e-17 | 10 |
gland of gut | 6.39e-17 | 10 |
chordate pharynx | 6.39e-17 | 10 |
pharyngeal region of foregut | 6.39e-17 | 10 |
pharynx | 1.74e-15 | 11 |
entire pharyngeal arch endoderm | 1.74e-15 | 11 |
early pharyngeal endoderm | 1.74e-15 | 11 |
pharyngeal arch system | 7.10e-10 | 18 |
upper respiratory tract | 2.08e-09 | 19 |