FFCP PHASE1:Hg19::chr7:86975045..86975051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54677 | |EntrezGene=54677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2366 | |HGNC=2366 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKG9 | |UniProt=Q9UKG9 | ||
|association_with_transcript=34bp_to_ENST00000331536_5end | |association_with_transcript=34bp_to_ENST00000331536_5end | ||
|cluster_id=chr7:86975045..86975051,+ | |||
|coexpression_cluster_id=C4703 | |||
|description=CAGE_peak_4_at_CROT_5end | |description=CAGE_peak_4_at_CROT_5end | ||
|id=chr7:86975045..86975051,+ | |id=chr7:86975045..86975051,+ | ||
|ontology_enrichment_celltype=CL:0000223!1.90e-07!59;CL:0002076!2.02e-07!43;CL:0002251!2.66e-07!21 | |ontology_enrichment_celltype=CL:0000223!1.90e-07!59;CL:0002076!2.02e-07!43;CL:0002251!2.66e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.19e-19;19!CL:0002537;1.21e-17;5!CL:0002541;3.21e-11;3!CL:0002577;2.48e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.51e-19,19;CL:0002537,4.12e-17,5;CL:0002541,3.19e-11,3;CL:0002577,1.15e-10,3;CL:0000047,6.49e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.32e-09!14;UBERON:0000158!1.32e-09!14;UBERON:0004923!2.40e-07!57;UBERON:0005156!3.56e-07!59;UBERON:0000990!3.56e-07!59;UBERON:0004119!3.96e-07!169;UBERON:0000925!3.96e-07!169;UBERON:0006595!3.96e-07!169;UBERON:0000064!6.43e-07!219;UBERON:0000161!7.60e-07!35;UBERON:0003124!7.80e-07!7;UBERON:0000478!9.95e-07!24 | |ontology_enrichment_uberon=UBERON:0005631!1.32e-09!14;UBERON:0000158!1.32e-09!14;UBERON:0004923!2.40e-07!57;UBERON:0005156!3.56e-07!59;UBERON:0000990!3.56e-07!59;UBERON:0004119!3.96e-07!169;UBERON:0000925!3.96e-07!169;UBERON:0006595!3.96e-07!169;UBERON:0000064!6.43e-07!219;UBERON:0000161!7.60e-07!35;UBERON:0003124!7.80e-07!7;UBERON:0000478!9.95e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.07e-21;10!UBERON:0000158;2.07e-21;10!UBERON:0000478;6.53e-18;24!UBERON:0001987;3.31e-13;4!UBERON:0000305;1.68e-12;7!UBERON:0003124;3.21e-11;3!UBERON:0000920;3.21e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.91e-33,14;UBERON:0000158,8.91e-33,14;UBERON:0003124,2.75e-23,7;UBERON:0000478,5.94e-18,24;UBERON:0001987,8.37e-14,4;UBERON:0004340,8.37e-14,4;UBERON:0000305,3.95e-12,7;UBERON:0000920,3.19e-11,3;UBERON:0004871,1.43e-10,8;UBERON:0004175,1.17e-09,25;UBERON:0004923,3.10e-09,66;UBERON:0005156,7.01e-07,59;UBERON:0000990,7.01e-07,59 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.547497700291537,0.125542639594803,0.458480434487708,0.164201178899891,0.157421562627358,0,0,0.309632246632152,0,0,0.369754010166788,0.619737604642413,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0.301150238155546,0.511946444617674,0,0,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0,0,0,0.17859945656816,0.22452937262617,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0.794455084879313,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0,0,0,0,0,0.336672227908132,0,0,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,3.55621325001386,0.710019185033229,0.302256294682921,0,0.773043412653187,0.818238361772504,0.860413786167011,0.243947412259191,0.132529768321485,0.116193942869518,0.621966330092223,0,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0.441463099414651,0.983907508344908,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0.695582429850461,0.821860859650752,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0.839910640994298,0.283550194484773,0.179117045405697,0.581267877027924,0,0,1.49682337822484,0.207328115540772,0,0,0.126995788584338,0,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,1.06375246633948,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0.431255149719035,0.513372145118994,2.7950408664471,0,1.54657762555539,1.34013012267479,1.27587750330633,0,0,0,0,0,0,0,0,0.315404830067869,0.234282829985426,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,1.21251028578504,1.66435439510497,1.81434175997808,0,0.153461973288062,0,0,0.511707249066704,0.482561763430822,0,0.308419387605311,0.177561725313127,0.246381468041427,0.519254429183621,0,1.0877350463246,0.200506470303285,0.0920809889358963,0.34444334449382,0.546273504020151,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0,0,1.13345112812495,0,0.165018999841176,1.14853107599234,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0,0,0,0,1.15699440752685,0,2.93509238737543,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0.329294892959902,0.379473173765715,0,0,0.670302275535787,0,1.22386941009813,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0.735120647943095,0.185803175125719,1.00988449083511,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.835218521685727,1.23087398947712,0,0,0,0,0,0.121360521749513,0.334330152832435,0.284136146806413,5.49112314896687,4.15750553165694,3.07160702099232,1.9882952955326,0.422008249231538,0,0,2.11125408127993,0,0.276283915531148,1.76352923497993,0.818149460017238,0.369254416383208,0.311039587661807,0,0,0,0.493217028184668,0,0,0.969332746095218,0.74214478529481,0,1.30213880542617,0.787139999965761,0,1.0241410345695,0.762760950878299,0.472775363535873,0,0,0,0.885741385813839,0.482385754501632,0,0.221158519862449,0.295547618953547,0.219385397153973,0,4.0432885840795,0.230850775511391,0,0,0.0897576444097721,0,1.27600463892768,3.57230614267263,3.19820865611181,0,0,0,0,0.19606253431774,0,0,0.476809736941136,0,0,1.69623685720729,0.216388639742091,0,0.796118080530053,0.611030144933625,0.593042257361244,0.494255755786011,0.104421949505455,0.202203398942031,0,0,0.182454789215666,0.19566461893209,0,3.94584402849391,4.83962864194656,0,0.126373159256976,0.150323419414493,0.414752765588989,0,0,0,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0.34823682632161,0.698906672968121,0,0,0,0.0821154570532092,0.581934098930517,0,1.58186518546373,0,0,0.633107959558787,1.17330829640882,0.160317640503067,0,1.79828648623917,0,0.229073192331831,0.343189995723929,0,0,0.235694034616795,0.135904206073614,0.104602846312333,3.36594118199862,0,0,0.2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| ||
|short_description=p4@CROT | |short_description=p4@CROT | ||
}} | }} |
Latest revision as of 21:09, 19 September 2015
Short description: | p4@CROT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CROT_5end |
Coexpression cluster: | C4703_amniotic_mesenchymal_cervical_seminal_chorionic_Fibroblast_glioblastoma |
Association with transcript: | 34bp_to_ENST00000331536_5end |
EntrezGene: | CROT |
HGNC: | 2366 |
UniProt: | Q9UKG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.51e-19 | 19 |
amnion mesenchymal stem cell | 4.12e-17 | 5 |
chorionic membrane mesenchymal stem cell | 3.19e-11 | 3 |
placental epithelial cell | 1.15e-10 | 3 |
neuronal stem cell | 6.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.91e-33 | 14 |
membranous layer | 8.91e-33 | 14 |
chorion | 2.75e-23 | 7 |
extraembryonic structure | 5.94e-18 | 24 |
placenta | 8.37e-14 | 4 |
allantois | 8.37e-14 | 4 |
amnion | 3.95e-12 | 7 |
egg chorion | 3.19e-11 | 3 |
somatic layer of lateral plate mesoderm | 1.43e-10 | 8 |
internal genitalia | 1.17e-09 | 25 |
organ component layer | 3.10e-09 | 66 |
reproductive structure | 7.01e-07 | 59 |
reproductive system | 7.01e-07 | 59 |