FFCP PHASE1:Hg19::chr5:115872142..115872149,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57556 | |EntrezGene=57556 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10738 | |HGNC=10738 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000510263_5end | |association_with_transcript=4bp_to_ENST00000510263_5end | ||
|cluster_id=chr5:115872142..115872149,- | |||
|coexpression_cluster_id=C1221 | |coexpression_cluster_id=C1221 | ||
|description=CAGE_peak_19_at_SEMA6A_5end | |description=CAGE_peak_19_at_SEMA6A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.58e-34;1 | |ontology_enrichment_development_v019=UBERON:0003124;2.58e-34;1 | ||
|ontology_enrichment_disease=DOID:3493!6.58e-08!2 | |ontology_enrichment_disease=DOID:3493!6.58e-08!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.83e-12!27;UBERON:0005409!3.07e-09!35;UBERON:0002108!1.33e-08!14;UBERON:0001155!7.42e-07!9 | |ontology_enrichment_uberon=UBERON:0000160!6.83e-12!27;UBERON:0005409!3.07e-09!35;UBERON:0002108!1.33e-08!14;UBERON:0001155!7.42e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002114;2.74e-12;2!UBERON:0001987;1.22e-09;4!UBERON:0000160;2.61e-08;17!UBERON:0002108;6.78e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0002114;2.74e-12;2!UBERON:0001987;1.22e-09;4!UBERON:0000160;2.61e-08;17!UBERON:0002108;6.78e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002114,3.24e-12,2;UBERON:0001987,1.22e-09,4;UBERON:0004340,1.22e-09,4;UBERON:0000160,2.80e-08,17;UBERON:0002108,7.49e-08,4 | |||
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|short_description=p19@SEMA6A | |short_description=p19@SEMA6A | ||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p19@SEMA6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SEMA6A_5end |
Coexpression cluster: | C1221_duodenum_temporal_argyrophil_small_liver_colon_stomach |
Association with transcript: | 4bp_to_ENST00000510263_5end |
EntrezGene: | SEMA6A |
HGNC: | 10738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duodenum | 3.24e-12 | 2 |
placenta | 1.22e-09 | 4 |
allantois | 1.22e-09 | 4 |
intestine | 2.80e-08 | 17 |
small intestine | 7.49e-08 | 4 |